RNA–Protein interactions for RNA: ENST00000482655.2

GTF3A-207, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 829 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-207ENST00000482655 KRIT1O00522 736 aa5.68□□□□□ -1.5
GTF3A-207ENST00000482655 CAPNS1P04632 268 aa5.68□□□□□ -1.5
GTF3A-207ENST00000482655 FGFR1P11362 822 aa5.68□□□□□ -1.5
GTF3A-207ENST00000482655 SYN1P17600 705 aa5.68□□□□□ -1.5
GTF3A-207ENST00000482655 STAT5AP42229 794 aa5.68□□□□□ -1.5
GTF3A-207ENST00000482655 SARSP49591 514 aaKnown RBP5.68□□□□□ -1.5
GTF3A-207ENST00000482655 GJA9P57773 515 aa5.68□□□□□ -1.5
GTF3A-207ENST00000482655 NKX3-2P78367 333 aa5.68□□□□□ -1.5
GTF3A-207ENST00000482655 RSPO2Q6UXX9 243 aaPredicted RBP5.68□□□□□ -1.5
GTF3A-207ENST00000482655 NSMFQ6X4W1 530 aa5.68□□□□□ -1.5
GTF3A-207ENST00000482655 DPH6Q7L8W6 267 aa5.68□□□□□ -1.5
GTF3A-207ENST00000482655 FRMD5Q7Z6J6 570 aa5.68□□□□□ -1.5
GTF3A-207ENST00000482655 TTLL6Q8N841 843 aa5.68□□□□□ -1.5
GTF3A-207ENST00000482655 DCAF4Q8WV16 495 aa5.68□□□□□ -1.5
GTF3A-207ENST00000482655 ZNF669Q96BR6 464 aaPredicted RBP5.68□□□□□ -1.5
GTF3A-207ENST00000482655 TEPSINQ96N21 525 aa5.68□□□□□ -1.5
GTF3A-207ENST00000482655 GORASP1Q9BQQ3 440 aa5.68□□□□□ -1.5
GTF3A-207ENST00000482655 KRTAP4-7Q9BYR0 210 aa5.68□□□□□ -1.5
GTF3A-207ENST00000482655 ARHGEF4Q9NR80 690 aa5.68□□□□□ -1.5
GTF3A-207ENST00000482655 PRRG2O14669 202 aa5.67□□□□□ -1.5
GTF3A-207ENST00000482655 FOXD2O60548 495 aaPredicted RBP5.67□□□□□ -1.5
GTF3A-207ENST00000482655 PABPC1P11940 636 aaKnown RBP5.67□□□□□ -1.5
GTF3A-207ENST00000482655 IFRD2Q12894 506 aaPredicted RBP5.67□□□□□ -1.5
GTF3A-207ENST00000482655 MTERF2Q49AM1 385 aa5.67□□□□□ -1.5
GTF3A-207ENST00000482655 EMC4Q5J8M3 183 aa5.67□□□□□ -1.5
GTF3A-207ENST00000482655 NT5DC1Q5TFE4 455 aa5.67□□□□□ -1.5
GTF3A-207ENST00000482655 NBPF6Q5VWK0 638 aa5.67□□□□□ -1.5
GTF3A-207ENST00000482655 FAM26EQ8N5C1 309 aa5.67□□□□□ -1.5
GTF3A-207ENST00000482655 LINC00482Q8N8I6 264 aa5.67□□□□□ -1.5
GTF3A-207ENST00000482655 KYQ8NBH2 561 aa5.67□□□□□ -1.5
GTF3A-207ENST00000482655 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.67□□□□□ -1.5
GTF3A-207ENST00000482655 NBPF4Q96M43 638 aa5.67□□□□□ -1.5
GTF3A-207ENST00000482655 C8orf37Q96NL8 207 aa5.67□□□□□ -1.5
GTF3A-207ENST00000482655 C11orf84Q9BUA3 381 aaPredicted RBP5.67□□□□□ -1.5
GTF3A-207ENST00000482655 HIRIP3Q9BW71 556 aaPredicted RBP5.67□□□□□ -1.5
GTF3A-207ENST00000482655 ADAM7Q9H2U9 754 aa5.67□□□□□ -1.5
GTF3A-207ENST00000482655 MYOTQ9UBF9 498 aa5.67□□□□□ -1.5
GTF3A-207ENST00000482655 NCANO14594 1321 aa5.67□□□□□ -1.5
GTF3A-207ENST00000482655 EIF4G1Q04637 1599 aaKnown RBP5.67□□□□□ -1.5
GTF3A-207ENST00000482655 PDPK1O15530 556 aa5.66□□□□□ -1.5
GTF3A-207ENST00000482655 GTF2F1P35269 517 aaKnown RBP eCLIP5.66□□□□□ -1.5
GTF3A-207ENST00000482655 DLX2Q07687 328 aaPredicted RBP5.66□□□□□ -1.5
GTF3A-207ENST00000482655 KIZQ2M2Z5 673 aa5.66□□□□□ -1.5
GTF3A-207ENST00000482655 CXorf38Q8TB03 319 aa5.66□□□□□ -1.5
GTF3A-207ENST00000482655 PHOSPHO1Q8TCT1 267 aa5.66□□□□□ -1.5
GTF3A-207ENST00000482655 TOE1Q96GM8 510 aaKnown RBP5.66□□□□□ -1.5
GTF3A-207ENST00000482655 IPO9Q96P70 1041 aaKnown RBP5.66□□□□□ -1.5
GTF3A-207ENST00000482655 CDC6Q99741 560 aa5.66□□□□□ -1.5
GTF3A-207ENST00000482655 ZFYVE21Q9BQ24 234 aa5.66□□□□□ -1.5
GTF3A-207ENST00000482655 SPATA9Q9BWV2 254 aa5.66□□□□□ -1.5
GTF3A-207ENST00000482655 DTLQ9NZJ0 730 aa5.66□□□□□ -1.5
GTF3A-207ENST00000482655 USP35Q9P2H5 1018 aa5.66□□□□□ -1.5
GTF3A-207ENST00000482655 TCRBV5S2A0A599 114 aa5.65□□□□□ -1.5
GTF3A-207ENST00000482655 MSCO60682 206 aa5.65□□□□□ -1.5
GTF3A-207ENST00000482655 TADA3O75528 432 aa5.65□□□□□ -1.5
GTF3A-207ENST00000482655 GNAT1P11488 350 aa5.65□□□□□ -1.5
GTF3A-207ENST00000482655 GRK2P25098 689 aa5.65□□□□□ -1.5
GTF3A-207ENST00000482655 THBS2P35442 1172 aa5.65□□□□□ -1.5
GTF3A-207ENST00000482655 GRK3P35626 688 aa5.65□□□□□ -1.5
GTF3A-207ENST00000482655 ITGA1P56199 1179 aa5.65□□□□□ -1.5
GTF3A-207ENST00000482655 SSRP1Q08945 709 aaKnown RBP5.65□□□□□ -1.5
GTF3A-207ENST00000482655 RASGRF1Q13972 1273 aa5.65□□□□□ -1.5
GTF3A-207ENST00000482655 UBXN11Q5T124 520 aa5.65□□□□□ -1.5
GTF3A-207ENST00000482655 CYP4F22Q6NT55 531 aa5.65□□□□□ -1.5
GTF3A-207ENST00000482655 LBX2Q6XYB7 198 aa5.65□□□□□ -1.5
GTF3A-207ENST00000482655 TRIM48Q8IWZ4 208 aa5.65□□□□□ -1.5
GTF3A-207ENST00000482655 ARRDC4Q8NCT1 418 aa5.65□□□□□ -1.5
GTF3A-207ENST00000482655 OSBP2Q969R2 916 aa5.65□□□□□ -1.5
GTF3A-207ENST00000482655 SYT3Q9BQG1 590 aa5.65□□□□□ -1.5
GTF3A-207ENST00000482655 ALG1Q9BT22 464 aa5.65□□□□□ -1.5
GTF3A-207ENST00000482655 JAM3Q9BX67 310 aa5.65□□□□□ -1.5
GTF3A-207ENST00000482655 SMOC1Q9H4F8 434 aa5.65□□□□□ -1.5
GTF3A-207ENST00000482655 SPATA6Q9NWH7 488 aaPredicted RBP5.65□□□□□ -1.5
GTF3A-207ENST00000482655 PFDN2Q9UHV9 154 aa5.65□□□□□ -1.5
GTF3A-207ENST00000482655 MSRB2Q9Y3D2 182 aa5.65□□□□□ -1.5
GTF3A-207ENST00000482655 NUB1Q9Y5A7 615 aa5.65□□□□□ -1.5
GTF3A-207ENST00000482655 MYO15BQ96JP2 1530 aa5.64□□□□□ -1.51
GTF3A-207ENST00000482655 KRTAP9-7A8MTY7 169 aa5.64□□□□□ -1.51
GTF3A-207ENST00000482655 RPL13P26373 211 aaKnown RBP5.64□□□□□ -1.51
GTF3A-207ENST00000482655 GPR85P60893 370 aa5.64□□□□□ -1.51
GTF3A-207ENST00000482655 SPIRE1Q08AE8 756 aa5.64□□□□□ -1.51
GTF3A-207ENST00000482655 CR1LQ2VPA4 569 aa5.64□□□□□ -1.51
GTF3A-207ENST00000482655 YOD1Q5VVQ6 348 aaPredicted RBP5.64□□□□□ -1.51
GTF3A-207ENST00000482655 STYK1Q6J9G0 422 aa5.64□□□□□ -1.51
GTF3A-207ENST00000482655 KCNT2Q6UVM3 1135 aa5.64□□□□□ -1.51
GTF3A-207ENST00000482655 SPATC1Q76KD6 591 aa5.64□□□□□ -1.51
GTF3A-207ENST00000482655 STK32CQ86UX6 486 aa5.64□□□□□ -1.51
GTF3A-207ENST00000482655 FAM124AQ86V42 546 aa5.64□□□□□ -1.51
GTF3A-207ENST00000482655 IFNL3Q8IZI9 196 aa5.64□□□□□ -1.51
GTF3A-207ENST00000482655 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.64□□□□□ -1.511e-8■□□□□ 11.1
GTF3A-207ENST00000482655 PIP4K2CQ8TBX8 421 aa5.64□□□□□ -1.51
GTF3A-207ENST00000482655 ARMC5Q96C12 935 aa5.64□□□□□ -1.51
GTF3A-207ENST00000482655 CLIC6Q96NY7 704 aa5.64□□□□□ -1.51
GTF3A-207ENST00000482655 SLC6A20Q9NP91 592 aa5.64□□□□□ -1.51
GTF3A-207ENST00000482655 SIRPGQ9P1W8 387 aa5.64□□□□□ -1.51
GTF3A-207ENST00000482655 PPARGC1AQ9UBK2 798 aaKnown RBP5.64□□□□□ -1.51
GTF3A-207ENST00000482655 BLACEA4D250 179 aa5.63□□□□□ -1.51
GTF3A-207ENST00000482655 CYP7B1O75881 506 aa5.63□□□□□ -1.51
GTF3A-207ENST00000482655 CELA3BP08861 270 aa5.63□□□□□ -1.51
GTF3A-207ENST00000482655 PRAMEF18Q5VWM3 479 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 116.9 ms