RNA–Protein interactions for RNA: ENST00000482470.5

CALD1-220, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 3,941 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-220ENST00000482470 LRRC4BQ9NT99 713 aa10.09□□□□□ -0.79
CALD1-220ENST00000482470 ATRNO75882 1429 aa10.09□□□□□ -0.79
CALD1-220ENST00000482470 KDM3AQ9Y4C1 1321 aa10.08□□□□□ -0.8
CALD1-220ENST00000482470 HSF2BPO75031 334 aa10.08□□□□□ -0.8
CALD1-220ENST00000482470 MYCNP04198 464 aaPredicted RBP10.08□□□□□ -0.8
CALD1-220ENST00000482470 KRT13P13646 458 aa10.08□□□□□ -0.8
CALD1-220ENST00000482470 NPR1P16066 1061 aa10.08□□□□□ -0.8
CALD1-220ENST00000482470 GUCY2FP51841 1108 aa10.08□□□□□ -0.8
CALD1-220ENST00000482470 VAV2P52735 878 aa10.08□□□□□ -0.8
CALD1-220ENST00000482470 GFPT1Q06210 699 aaPredicted RBP10.08□□□□□ -0.8
CALD1-220ENST00000482470 PRKG1Q13976 671 aa10.08□□□□□ -0.8
CALD1-220ENST00000482470 STXBP4Q6ZWJ1 553 aa10.08□□□□□ -0.8
CALD1-220ENST00000482470 RAD54LQ92698 747 aa10.08□□□□□ -0.8
CALD1-220ENST00000482470 MED15Q96RN5 788 aa10.08□□□□□ -0.8
CALD1-220ENST00000482470 MTRQ99707 1265 aa10.08□□□□□ -0.8
CALD1-220ENST00000482470 KCNQ5Q9NR82 932 aa10.08□□□□□ -0.8
CALD1-220ENST00000482470 FAN1Q9Y2M0 1017 aa10.08□□□□□ -0.8
CALD1-220ENST00000482470 PCDHA13Q9Y5I0 950 aa10.08□□□□□ -0.8
CALD1-220ENST00000482470 PLEKHG2Q9H7P9 1386 aa10.08□□□□□ -0.8
CALD1-220ENST00000482470 NCK2O43639 380 aa10.08□□□□□ -0.8
CALD1-220ENST00000482470 COASYQ13057 564 aa10.08□□□□□ -0.8
CALD1-220ENST00000482470 KCNB1Q14721 858 aa10.08□□□□□ -0.8
CALD1-220ENST00000482470 WDR78Q5VTH9 848 aa10.08□□□□□ -0.8
CALD1-220ENST00000482470 TAX1BP1Q86VP1 789 aa10.08□□□□□ -0.8
CALD1-220ENST00000482470 NOA1Q8NC60 698 aaKnown RBP10.08□□□□□ -0.8
CALD1-220ENST00000482470 NAP1L4Q99733 375 aaKnown RBP10.08□□□□□ -0.8
CALD1-220ENST00000482470 NUDT12Q9BQG2 462 aa10.08□□□□□ -0.8
CALD1-220ENST00000482470 GLT8D2Q9H1C3 349 aa10.08□□□□□ -0.8
CALD1-220ENST00000482470 VSNL1P62760 191 aa10.08□□□□□ -0.8
CALD1-220ENST00000482470 LLGL1Q15334 1064 aa10.08□□□□□ -0.8
CALD1-220ENST00000482470 E2F4Q16254 413 aa10.08□□□□□ -0.8
CALD1-220ENST00000482470 ELOA2Q8IYF1 753 aaPredicted RBP10.08□□□□□ -0.8
CALD1-220ENST00000482470 U2AF1L4Q8WU68 220 aaKnown RBP10.08□□□□□ -0.8
CALD1-220ENST00000482470 SH2D3AQ9BRG2 576 aa10.08□□□□□ -0.8
CALD1-220ENST00000482470 FRMD4BQ9Y2L6 1034 aa10.08□□□□□ -0.8
CALD1-220ENST00000482470 CCDC169A6NNP5 214 aa10.07□□□□□ -0.8
CALD1-220ENST00000482470 RNF225M0QZC1 329 aaPredicted RBP10.07□□□□□ -0.8
CALD1-220ENST00000482470 KCNK3O14649 394 aa10.07□□□□□ -0.8
CALD1-220ENST00000482470 ALAS1P13196 640 aa10.07□□□□□ -0.8
CALD1-220ENST00000482470 ADRA2BP18089 450 aa10.07□□□□□ -0.8
CALD1-220ENST00000482470 ARHGAP4P98171 946 aa10.07□□□□□ -0.8
CALD1-220ENST00000482470 IFFO1Q0D2I5 559 aa10.07□□□□□ -0.8
CALD1-220ENST00000482470 TBX2Q13207 712 aaPredicted RBP10.07□□□□□ -0.8
CALD1-220ENST00000482470 SH3RF1Q7Z6J0 888 aa10.07□□□□□ -0.8
CALD1-220ENST00000482470 SP8Q8IXZ3 490 aa10.07□□□□□ -0.8
CALD1-220ENST00000482470 ZNF526Q8TF50 670 aaPredicted RBP10.07□□□□□ -0.8
CALD1-220ENST00000482470 BICD1Q96G01 975 aa10.07□□□□□ -0.8
CALD1-220ENST00000482470 DDX4Q9NQI0 724 aaKnown RBP10.07□□□□□ -0.8
CALD1-220ENST00000482470 SMARCAL1Q9NZC9 954 aa10.07□□□□□ -0.8
CALD1-220ENST00000482470 BCS1LQ9Y276 419 aa10.07□□□□□ -0.8
CALD1-220ENST00000482470 RABGAP1Q9Y3P9 1069 aa10.07□□□□□ -0.8
CALD1-220ENST00000482470 ARFGEF2Q9Y6D5 1785 aa10.07□□□□□ -0.8
CALD1-220ENST00000482470 CALUO43852 315 aaPredicted RBP10.07□□□□□ -0.8
CALD1-220ENST00000482470 BRD2P25440 801 aaKnown RBP10.07□□□□□ -0.8
CALD1-220ENST00000482470 NAA35Q5VZE5 725 aa10.07□□□□□ -0.8
CALD1-220ENST00000482470 TTC19Q6DKK2 380 aaPredicted RBP10.07□□□□□ -0.8
CALD1-220ENST00000482470 RETREG2Q8NC44 543 aa10.07□□□□□ -0.8
CALD1-220ENST00000482470 RGL1Q9NZL6 768 aa10.07□□□□□ -0.8
CALD1-220ENST00000482470 CAPN11Q9UMQ6 739 aa10.07□□□□□ -0.8
CALD1-220ENST00000482470 GJA3Q9Y6H8 435 aa10.07□□□□□ -0.8
CALD1-220ENST00000482470 PRPHP41219 470 aa10.07□□□□□ -0.8
CALD1-220ENST00000482470 TUBB4BP68371 445 aa10.07□□□□□ -0.8
CALD1-220ENST00000482470 CASP8Q14790 479 aa10.07□□□□□ -0.8
CALD1-220ENST00000482470 EXOC3L4Q17RC7 722 aa10.07□□□□□ -0.8
CALD1-220ENST00000482470 SYDE2Q5VT97 1194 aa10.07□□□□□ -0.8
CALD1-220ENST00000482470 LRCH2Q5VUJ6 765 aa10.07□□□□□ -0.8
CALD1-220ENST00000482470 EP400NLQ6ZTU2 488 aa10.07□□□□□ -0.8
CALD1-220ENST00000482470 SLFN12Q8IYM2 578 aa10.07□□□□□ -0.8
CALD1-220ENST00000482470 CTNNBL1Q8WYA6 563 aaPredicted RBP10.07□□□□□ -0.8
CALD1-220ENST00000482470 KBTBD4Q9NVX7 518 aa10.07□□□□□ -0.8
CALD1-220ENST00000482470 PACSIN2Q9UNF0 486 aaPredicted RBP10.07□□□□□ -0.8
CALD1-220ENST00000482470 PCDHAC2Q9Y5I4 1007 aa10.07□□□□□ -0.8
CALD1-220ENST00000482470 GOLGA6BA6NDN3 693 aa10.06□□□□□ -0.8
CALD1-220ENST00000482470 SMIM23A6NLE4 172 aa10.06□□□□□ -0.8
CALD1-220ENST00000482470 ERLIN2O94905 339 aa10.06□□□□□ -0.8
CALD1-220ENST00000482470 TM4SF1P30408 202 aa10.06□□□□□ -0.8
CALD1-220ENST00000482470 SFR1Q86XK3 245 aa10.06□□□□□ -0.8
CALD1-220ENST00000482470 ZFPM1Q8IX07 1006 aa10.06□□□□□ -0.8
CALD1-220ENST00000482470 FAM178BQ8IXR5 827 aa10.06□□□□□ -0.8
CALD1-220ENST00000482470 CNPY4Q8N129 248 aa10.06□□□□□ -0.8
CALD1-220ENST00000482470 MASTLQ96GX5 879 aa10.06□□□□□ -0.8
CALD1-220ENST00000482470 MMS19Q96T76 1030 aa10.06□□□□□ -0.8
CALD1-220ENST00000482470 LACRTQ9GZZ8 138 aa10.06□□□□□ -0.8
CALD1-220ENST00000482470 RIC8AQ9NPQ8 531 aa10.06□□□□□ -0.8
CALD1-220ENST00000482470 MYO1AQ9UBC5 1043 aa10.06□□□□□ -0.8
CALD1-220ENST00000482470 ATP6V0A2Q9Y487 856 aa10.06□□□□□ -0.8
CALD1-220ENST00000482470 ECE2O60344 883 aa10.06□□□□□ -0.8
CALD1-220ENST00000482470 SRGNP10124 158 aa10.06□□□□□ -0.8
CALD1-220ENST00000482470 GCFC2P16383 781 aaKnown RBP10.06□□□□□ -0.8
CALD1-220ENST00000482470 SF3A3Q12874 501 aaKnown RBP eCLIP10.06□□□□□ -0.8
CALD1-220ENST00000482470 NPY5RQ15761 445 aa10.06□□□□□ -0.8
CALD1-220ENST00000482470 CFAP221Q4G0U5 840 aa10.06□□□□□ -0.8
CALD1-220ENST00000482470 NAALADL2Q58DX5 795 aa10.06□□□□□ -0.8
CALD1-220ENST00000482470 ODR4Q5SWX8 454 aa10.06□□□□□ -0.8
CALD1-220ENST00000482470 TTI2Q6NXR4 508 aa10.06□□□□□ -0.8
CALD1-220ENST00000482470 NFRKBQ6P4R8 1299 aa10.06□□□□□ -0.8
CALD1-220ENST00000482470 C10orf67Q8IYJ2 551 aa10.06□□□□□ -0.8
CALD1-220ENST00000482470 GPATCH11Q8N954 259 aa10.06□□□□□ -0.8
CALD1-220ENST00000482470 SELENOOQ9BVL4 669 aa10.06□□□□□ -0.8
CALD1-220ENST00000482470 HYOU1Q9Y4L1 999 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms