RNA–Protein interactions for RNA: ENST00000482420.1

TMEM139-208, Transcript of transmembrane protein 139, humanhuman

TSL 1 (best)

Gene TMEM139, Length 510 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM139-208ENST00000482420 SPATA33Q96N06 139 aa22.1■■□□□ 1.13
TMEM139-208ENST00000482420 PIGSQ96S52 555 aa22.1■■□□□ 1.13
TMEM139-208ENST00000482420 ZBED2Q9BTP6 218 aa22.1■■□□□ 1.13
TMEM139-208ENST00000482420 SENP2Q9HC62 589 aa22.1■■□□□ 1.13
TMEM139-208ENST00000482420 GGPS1O95749 300 aa22.09■■□□□ 1.13
TMEM139-208ENST00000482420 KCNQ1P51787 676 aa22.09■■□□□ 1.13
TMEM139-208ENST00000482420 GHRHRQ02643 423 aa22.09■■□□□ 1.13
TMEM139-208ENST00000482420 TCTN1Q2MV58 587 aa22.09■■□□□ 1.13
TMEM139-208ENST00000482420 HSDL1Q3SXM5 330 aa22.09■■□□□ 1.13
TMEM139-208ENST00000482420 TTC22Q5TAA0 569 aa22.09■■□□□ 1.13
TMEM139-208ENST00000482420 CNKSR3Q6P9H4 555 aa22.09■■□□□ 1.13
TMEM139-208ENST00000482420 STOX1Q6ZVD7 989 aa22.09■■□□□ 1.13
TMEM139-208ENST00000482420 FCHSD1Q86WN1 690 aa22.09■■□□□ 1.13
TMEM139-208ENST00000482420 GPKOWQ92917 476 aaPredicted RBP eCLIP22.09■■□□□ 1.13
TMEM139-208ENST00000482420 MYH7BA7E2Y1 1941 aa22.09■■□□□ 1.13
TMEM139-208ENST00000482420 HAS3O00219 553 aa22.08■■□□□ 1.13
TMEM139-208ENST00000482420 IFIT3O14879 490 aaKnown RBP22.08■■□□□ 1.13
TMEM139-208ENST00000482420 UBA1P22314 1058 aaKnown RBP22.08■■□□□ 1.13
TMEM139-208ENST00000482420 SP2Q02086 613 aa22.08■■□□□ 1.13
TMEM139-208ENST00000482420 PTH1RQ03431 593 aa22.08■■□□□ 1.13
TMEM139-208ENST00000482420 RBL2Q08999 1139 aa22.08■■□□□ 1.13
TMEM139-208ENST00000482420 GRM4Q14833 912 aa22.08■■□□□ 1.13
TMEM139-208ENST00000482420 CELF3Q5SZQ8 465 aaKnown RBP22.08■■□□□ 1.13
TMEM139-208ENST00000482420 MYSM1Q5VVJ2 828 aa22.08■■□□□ 1.13
TMEM139-208ENST00000482420 PRRC2BQ5JSZ5 2229 aaKnown RBP22.08■■□□□ 1.13
TMEM139-208ENST00000482420 COL4A4P53420 1690 aaPredicted RBP22.07■■□□□ 1.12
TMEM139-208ENST00000482420 TCF20Q9UGU0 1960 aaKnown RBP22.07■■□□□ 1.12
TMEM139-208ENST00000482420 ERICH2A1L162 156 aa22.07■■□□□ 1.12
TMEM139-208ENST00000482420 GCOM1H8Y6P7 765 aaPredicted RBP22.07■■□□□ 1.12
TMEM139-208ENST00000482420 CXCL10P02778 98 aa22.07■■□□□ 1.12
TMEM139-208ENST00000482420 CYP21A2P08686 494 aa22.07■■□□□ 1.12
TMEM139-208ENST00000482420 POLR2MP0CAP2 368 aa22.07■■□□□ 1.12
TMEM139-208ENST00000482420 PTK7Q13308 1070 aa22.07■■□□□ 1.12
TMEM139-208ENST00000482420 GRB10Q13322 594 aa22.07■■□□□ 1.12
TMEM139-208ENST00000482420 HIC1Q14526 733 aa22.07■■□□□ 1.12
TMEM139-208ENST00000482420 ZNF618Q5T7W0 954 aa22.07■■□□□ 1.12
TMEM139-208ENST00000482420 VSIG10LQ86VR7 867 aa22.07■■□□□ 1.12
TMEM139-208ENST00000482420 PIBF1Q8WXW3 757 aa22.07■■□□□ 1.12
TMEM139-208ENST00000482420 MAP3K20Q9NYL2 800 aaKnown RBP22.07■■□□□ 1.12
TMEM139-208ENST00000482420 MTUS1Q9ULD2 1270 aa22.07■■□□□ 1.12
TMEM139-208ENST00000482420 TAF6LQ9Y6J9 622 aa22.07■■□□□ 1.12
TMEM139-208ENST00000482420 U3KPZ7 1027 aaPredicted RBP22.07■■□□□ 1.12
TMEM139-208ENST00000482420 CYTH3O43739 400 aa22.06■■□□□ 1.12
TMEM139-208ENST00000482420 PARNO95453 639 aaKnown RBP22.06■■□□□ 1.12
TMEM139-208ENST00000482420 BMP1P13497 986 aa22.06■■□□□ 1.12
TMEM139-208ENST00000482420 POU3F3P20264 500 aaPredicted RBP22.06■■□□□ 1.12
TMEM139-208ENST00000482420 CCND2P30279 289 aa22.06■■□□□ 1.12
TMEM139-208ENST00000482420 FAM117BQ6P1L5 589 aa22.06■■□□□ 1.12
TMEM139-208ENST00000482420 KCNV1Q6PIU1 500 aa22.06■■□□□ 1.12
TMEM139-208ENST00000482420 RALYLQ86SE5 291 aaKnown RBP22.06■■□□□ 1.12
TMEM139-208ENST00000482420 GDPD5Q8WTR4 605 aa22.06■■□□□ 1.12
TMEM139-208ENST00000482420 RIOX1Q9H6W3 641 aa22.06■■□□□ 1.12
TMEM139-208ENST00000482420 MLXIPQ9HAP2 919 aa22.06■■□□□ 1.12
TMEM139-208ENST00000482420 PPFIA4O75335 1185 aa22.05■■□□□ 1.12
TMEM139-208ENST00000482420 HOXD8P13378 290 aaPredicted RBP22.05■■□□□ 1.12
TMEM139-208ENST00000482420 MBTPS1Q14703 1052 aa22.05■■□□□ 1.12
TMEM139-208ENST00000482420 WTAPQ15007 396 aa22.05■■□□□ 1.12
TMEM139-208ENST00000482420 AAK1Q2M2I8 961 aa22.05■■□□□ 1.12
TMEM139-208ENST00000482420 TRIM71Q2Q1W2 868 aaKnown RBP22.05■■□□□ 1.12
TMEM139-208ENST00000482420 TRAF7Q6Q0C0 670 aa22.05■■□□□ 1.12
TMEM139-208ENST00000482420 RUFY2Q8WXA3 655 aa22.05■■□□□ 1.12
TMEM139-208ENST00000482420 TRANK1O15050 2925 aa22.05■■□□□ 1.12
TMEM139-208ENST00000482420 ABHD14A-ACY1A0A1B0GW23 586 aa22.04■■□□□ 1.12
TMEM139-208ENST00000482420 LPXNO60711 386 aa22.04■■□□□ 1.12
TMEM139-208ENST00000482420 COL9A1P20849 921 aa22.04■■□□□ 1.12
TMEM139-208ENST00000482420 THPOP40225 353 aa22.04■■□□□ 1.12
TMEM139-208ENST00000482420 IKBKEQ14164 716 aa22.04■■□□□ 1.12
TMEM139-208ENST00000482420 C16orf70Q9BSU1 422 aa22.04■■□□□ 1.12
TMEM139-208ENST00000482420 BCAS3Q9H6U6 928 aa22.04■■□□□ 1.12
TMEM139-208ENST00000482420 PNMA6FA0A0J9YX94 578 aa22.03■■□□□ 1.12
TMEM139-208ENST00000482420 E7EWF7 191 aa22.03■■□□□ 1.12
TMEM139-208ENST00000482420 GJB5O95377 273 aa22.03■■□□□ 1.12
TMEM139-208ENST00000482420 CHMLP26374 656 aa22.03■■□□□ 1.12
TMEM139-208ENST00000482420 TROAPQ12815 778 aa22.03■■□□□ 1.12
TMEM139-208ENST00000482420 SART3Q15020 963 aaKnown RBP22.03■■□□□ 1.12
TMEM139-208ENST00000482420 SAMD3Q8N6K7 520 aa22.03■■□□□ 1.12
TMEM139-208ENST00000482420 NCOA7Q8NI08 942 aa22.03■■□□□ 1.12
TMEM139-208ENST00000482420 BAZ2BQ9UIF8 2168 aaKnown RBP22.03■■□□□ 1.12
TMEM139-208ENST00000482420 NOP56O00567 594 aaKnown RBP22.02■■□□□ 1.12
TMEM139-208ENST00000482420 TGFB3P10600 412 aa22.02■■□□□ 1.12
TMEM139-208ENST00000482420 TRAF1Q13077 416 aa22.02■■□□□ 1.12
TMEM139-208ENST00000482420 ATP6V0A1Q93050 837 aa22.02■■□□□ 1.12
TMEM139-208ENST00000482420 RAD9AQ99638 391 aa22.02■■□□□ 1.12
TMEM139-208ENST00000482420 RTEL1Q9NZ71 1219 aa22.02■■□□□ 1.12
TMEM139-208ENST00000482420 RAPGEFL1Q9UHV5 662 aa22.02■■□□□ 1.12
TMEM139-208ENST00000482420 C17orf102A2RUQ5 167 aa22.01■■□□□ 1.11
TMEM139-208ENST00000482420 H3BRB1 525 aa22.01■■□□□ 1.11
TMEM139-208ENST00000482420 LGR5O75473 907 aa22.01■■□□□ 1.11
TMEM139-208ENST00000482420 LGALS2P05162 132 aa22.01■■□□□ 1.11
TMEM139-208ENST00000482420 SMIM10L2AP0DMW4 78 aa22.01■■□□□ 1.11
TMEM139-208ENST00000482420 SMIM10L2BP0DMW5 78 aa22.01■■□□□ 1.11
TMEM139-208ENST00000482420 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.01■■□□□ 1.11
TMEM139-208ENST00000482420 CATIPQ7Z7H3 387 aa22.01■■□□□ 1.11
TMEM139-208ENST00000482420 SERINC5Q86VE9 423 aa22.01■■□□□ 1.11
TMEM139-208ENST00000482420 MYL10Q9BUA6 226 aa22.01■■□□□ 1.11
TMEM139-208ENST00000482420 TUT1Q9H6E5 874 aaKnown RBP22.01■■□□□ 1.11
TMEM139-208ENST00000482420 COG5Q9UP83 839 aa22.01■■□□□ 1.11
TMEM139-208ENST00000482420 LINC01553A4QN01 128 aa22■■□□□ 1.11
TMEM139-208ENST00000482420 RSPH10B2B2RC85 870 aa22■■□□□ 1.11
TMEM139-208ENST00000482420 EFCAB14O75071 495 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms