RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 COPS5Q92905 334 aa15.03■□□□□ -0
HDAC1-208ENST00000482310 UNC93B1Q9H1C4 597 aa15.03■□□□□ -0
HDAC1-208ENST00000482310 DDX25Q9UHL0 483 aaKnown RBP15.03■□□□□ -0
HDAC1-208ENST00000482310 UBIAD1Q9Y5Z9 338 aa15.03■□□□□ -0
HDAC1-208ENST00000482310 MKI67P46013 3256 aaKnown RBP15.03■□□□□ -0
HDAC1-208ENST00000482310 LOC102724159A0A0B4J2E5 919 aa15.02■□□□□ -0
HDAC1-208ENST00000482310 DDX39AO00148 427 aaKnown RBP15.02■□□□□ -0
HDAC1-208ENST00000482310 CYP3A4P08684 503 aa15.02■□□□□ -0
HDAC1-208ENST00000482310 ARP10275 920 aa15.02■□□□□ -0
HDAC1-208ENST00000482310 SP4Q02446 784 aa15.02■□□□□ -0
HDAC1-208ENST00000482310 CEBPZQ03701 1054 aaKnown RBP15.02■□□□□ -0
HDAC1-208ENST00000482310 SEMA3FQ13275 785 aa15.02■□□□□ -0
HDAC1-208ENST00000482310 PWP2Q15269 919 aaKnown RBP15.02■□□□□ -0
HDAC1-208ENST00000482310 BRAPQ7Z569 592 aa15.02■□□□□ -0
HDAC1-208ENST00000482310 POTEDQ86YR6 584 aa15.02■□□□□ -0
HDAC1-208ENST00000482310 FTOQ9C0B1 505 aaKnown RBP eCLIP15.02■□□□□ -0
HDAC1-208ENST00000482310 HMX1Q9NP08 348 aaPredicted RBP15.02■□□□□ -0
HDAC1-208ENST00000482310 JADE2Q9NQC1 790 aa15.02■□□□□ -0
HDAC1-208ENST00000482310 ZDHHC9Q9Y397 364 aa15.02■□□□□ -0
HDAC1-208ENST00000482310 PCDHB6Q9Y5E3 794 aa15.02■□□□□ -0
HDAC1-208ENST00000482310 MARCH6O60337 910 aa15.01□□□□□ -0.01
HDAC1-208ENST00000482310 IGHA2P01877 340 aa15.01□□□□□ -0.01
HDAC1-208ENST00000482310 TXNP10599 105 aaKnown RBP15.01□□□□□ -0.01
HDAC1-208ENST00000482310 CCL5P13501 91 aa15.01□□□□□ -0.01
HDAC1-208ENST00000482310 SMPD1P17405 629 aa15.01□□□□□ -0.01
HDAC1-208ENST00000482310 TOB1P50616 345 aaPredicted RBP15.01□□□□□ -0.01
HDAC1-208ENST00000482310 USP11P51784 963 aa15.01□□□□□ -0.01
HDAC1-208ENST00000482310 TNFAIP2Q03169 654 aa15.01□□□□□ -0.01
HDAC1-208ENST00000482310 TTLL4Q14679 1199 aa15.01□□□□□ -0.01
HDAC1-208ENST00000482310 PRPF38BQ5VTL8 546 aaKnown RBP15.01□□□□□ -0.01
HDAC1-208ENST00000482310 MYSM1Q5VVJ2 828 aa15.01□□□□□ -0.01
HDAC1-208ENST00000482310 XRRA1Q6P2D8 792 aa15.01□□□□□ -0.01
HDAC1-208ENST00000482310 SCFD2Q8WU76 684 aa15.01□□□□□ -0.01
HDAC1-208ENST00000482310 CHAMP1Q96JM3 812 aa15.01□□□□□ -0.01
HDAC1-208ENST00000482310 INPP4AQ96PE3 977 aaPredicted RBP15.01□□□□□ -0.01
HDAC1-208ENST00000482310 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.01□□□□□ -0.01
HDAC1-208ENST00000482310 RNF208Q9H0X6 261 aa15.01□□□□□ -0.01
HDAC1-208ENST00000482310 KCNH7Q9NS40 1196 aa15.01□□□□□ -0.01
HDAC1-208ENST00000482310 BRCA2P51587 3418 aa15.01□□□□□ -0.01
HDAC1-208ENST00000482310 IGLV3-22A0A075B6J6 115 aa15□□□□□ -0.01
HDAC1-208ENST00000482310 FIBPO43427 364 aa15□□□□□ -0.01
HDAC1-208ENST00000482310 NEMFO60524 1076 aa15□□□□□ -0.01
HDAC1-208ENST00000482310 STAM2O75886 525 aa15□□□□□ -0.01
HDAC1-208ENST00000482310 BRD1O95696 1058 aa15□□□□□ -0.01
HDAC1-208ENST00000482310 AKR1A1P14550 325 aa15□□□□□ -0.01
HDAC1-208ENST00000482310 UBA1P22314 1058 aaKnown RBP15□□□□□ -0.01
HDAC1-208ENST00000482310 SETQ01105 290 aaPredicted RBP15□□□□□ -0.01
HDAC1-208ENST00000482310 SP2Q02086 613 aa15□□□□□ -0.01
HDAC1-208ENST00000482310 MAP3K21Q5TCX8 1036 aa15□□□□□ -0.01
HDAC1-208ENST00000482310 GPRASP2Q96D09 838 aa15□□□□□ -0.01
HDAC1-208ENST00000482310 ZNF577Q9BSK1 485 aa15□□□□□ -0.01
HDAC1-208ENST00000482310 ZSCAN16Q9H4T2 348 aaPredicted RBP15□□□□□ -0.01
HDAC1-208ENST00000482310 BCAS3Q9H6U6 928 aa15□□□□□ -0.01
HDAC1-208ENST00000482310 PCDH10Q9P2E7 1040 aa15□□□□□ -0.01
HDAC1-208ENST00000482310 FAM184BQ9ULE4 1060 aa15□□□□□ -0.01
HDAC1-208ENST00000482310 KAT6AQ92794 2004 aa14.99□□□□□ -0.01
HDAC1-208ENST00000482310 SPATA31C2B4DYI2 1134 aa14.99□□□□□ -0.01
HDAC1-208ENST00000482310 MEIS1O00470 390 aa14.99□□□□□ -0.01
HDAC1-208ENST00000482310 MSH4O15457 936 aa14.99□□□□□ -0.01
HDAC1-208ENST00000482310 SEPT4O43236 478 aa14.99□□□□□ -0.01
HDAC1-208ENST00000482310 CHMP2AO43633 222 aa14.99□□□□□ -0.01
HDAC1-208ENST00000482310 ATP9AO75110 1047 aa14.99□□□□□ -0.01
HDAC1-208ENST00000482310 GGPS1O95749 300 aa14.99□□□□□ -0.01
HDAC1-208ENST00000482310 NCLP19338 710 aaKnown RBP14.99□□□□□ -0.01
HDAC1-208ENST00000482310 CIITAP33076 1130 aa14.99□□□□□ -0.01
HDAC1-208ENST00000482310 DDIT3P35638 169 aa14.99□□□□□ -0.01
HDAC1-208ENST00000482310 IRX5P78411 483 aaPredicted RBP14.99□□□□□ -0.01
HDAC1-208ENST00000482310 CYFIP1Q7L576 1253 aa14.99□□□□□ -0.01
HDAC1-208ENST00000482310 TLK2Q86UE8 772 aa14.99□□□□□ -0.01
HDAC1-208ENST00000482310 OR6J1Q8NGC5 347 aa14.99□□□□□ -0.01
HDAC1-208ENST00000482310 LENG9Q96B70 501 aa14.99□□□□□ -0.01
HDAC1-208ENST00000482310 ZNF333Q96JL9 665 aa14.99□□□□□ -0.01
HDAC1-208ENST00000482310 AGO4Q9HCK5 861 aaKnown RBP14.99□□□□□ -0.01
HDAC1-208ENST00000482310 DDX20Q9UHI6 824 aaKnown RBP14.99□□□□□ -0.01
HDAC1-208ENST00000482310 DDX41Q9UJV9 622 aaKnown RBP14.99□□□□□ -0.01
HDAC1-208ENST00000482310 CLIC4Q9Y696 253 aa14.99□□□□□ -0.01
HDAC1-208ENST00000482310 DYNC1LI2O43237 492 aaPredicted RBP14.98□□□□□ -0.01
HDAC1-208ENST00000482310 PGK1P00558 417 aa14.98□□□□□ -0.01
HDAC1-208ENST00000482310 RARBP10826 455 aa14.98□□□□□ -0.01
HDAC1-208ENST00000482310 GCFC2P16383 781 aaKnown RBP14.98□□□□□ -0.01
HDAC1-208ENST00000482310 NUCB2P80303 420 aa14.98□□□□□ -0.01
HDAC1-208ENST00000482310 ITGB3BPQ13352 177 aaPredicted RBP14.98□□□□□ -0.01
HDAC1-208ENST00000482310 CALCRLQ16602 461 aa14.98□□□□□ -0.01
HDAC1-208ENST00000482310 Q4G0T1 1027 aa14.98□□□□□ -0.01
HDAC1-208ENST00000482310 RILPL1Q5EBL4 403 aa14.98□□□□□ -0.01
HDAC1-208ENST00000482310 IQSEC1Q6DN90 963 aa14.98□□□□□ -0.01
HDAC1-208ENST00000482310 DHX37Q8IY37 1157 aaKnown RBP14.98□□□□□ -0.01
HDAC1-208ENST00000482310 DEFB118Q96PH6 123 aa14.98□□□□□ -0.01
HDAC1-208ENST00000482310 NAP1L4Q99733 375 aaKnown RBP14.98□□□□□ -0.01
HDAC1-208ENST00000482310 TMEM60Q9H2L4 133 aa14.98□□□□□ -0.01
HDAC1-208ENST00000482310 MLXIPQ9HAP2 919 aa14.98□□□□□ -0.01
HDAC1-208ENST00000482310 TFIP11Q9UBB9 837 aaKnown RBP14.98□□□□□ -0.01
HDAC1-208ENST00000482310 NRBP1Q9UHY1 535 aa14.98□□□□□ -0.01
HDAC1-208ENST00000482310 TELO2Q9Y4R8 837 aa14.98□□□□□ -0.01
HDAC1-208ENST00000482310 KIAA0100Q14667 2235 aaKnown RBP14.97□□□□□ -0.01
HDAC1-208ENST00000482310 SYNRGQ9UMZ2 1314 aa14.97□□□□□ -0.01
HDAC1-208ENST00000482310 CYP3A7-CYP3A51PA0A087WV96 503 aa14.97□□□□□ -0.01
HDAC1-208ENST00000482310 RBM47A0AV96 593 aaKnown RBP14.97□□□□□ -0.01
HDAC1-208ENST00000482310 POTEFA5A3E0 1075 aa14.97□□□□□ -0.01
HDAC1-208ENST00000482310 IPO5O00410 1097 aaKnown RBP14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms