RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 CELF3Q5SZQ8 465 aaKnown RBP12.07□□□□□ -0.48
CPSF4-212ENST00000482251 RASIP1Q5U651 963 aa12.07□□□□□ -0.48
CPSF4-212ENST00000482251 TMTC2Q8N394 836 aa12.07□□□□□ -0.48
CPSF4-212ENST00000482251 FANCBQ8NB91 859 aa12.07□□□□□ -0.48
CPSF4-212ENST00000482251 HERVK_113Q902F9 699 aa12.07□□□□□ -0.48
CPSF4-212ENST00000482251 EMID1Q96A84 441 aaPredicted RBP12.07□□□□□ -0.48
CPSF4-212ENST00000482251 TIFAQ96CG3 184 aa12.07□□□□□ -0.48
CPSF4-212ENST00000482251 VWCEQ96DN2 955 aa12.07□□□□□ -0.48
CPSF4-212ENST00000482251 LZTS2Q9BRK4 669 aa12.07□□□□□ -0.48
CPSF4-212ENST00000482251 HDAC6Q9UBN7 1215 aa12.07□□□□□ -0.48
CPSF4-212ENST00000482251 BRPF3Q9ULD4 1205 aa12.07□□□□□ -0.48
CPSF4-212ENST00000482251 A0A0C4DFX4 3053 aa12.07□□□□□ -0.48
CPSF4-212ENST00000482251 KLF18A0A0U1RQI7 1052 aa12.06□□□□□ -0.48
CPSF4-212ENST00000482251 GOLGA8AA7E2F4 631 aa12.06□□□□□ -0.48
CPSF4-212ENST00000482251 GOLGA8BA8MQT2 603 aa12.06□□□□□ -0.48
CPSF4-212ENST00000482251 MEIS2O14770 477 aa12.06□□□□□ -0.48
CPSF4-212ENST00000482251 F2P00734 622 aa12.06□□□□□ -0.48
CPSF4-212ENST00000482251 NEFLP07196 543 aa12.06□□□□□ -0.48
CPSF4-212ENST00000482251 RABGGTBP53611 331 aa12.06□□□□□ -0.48
CPSF4-212ENST00000482251 SEMA3FQ13275 785 aa12.06□□□□□ -0.48
CPSF4-212ENST00000482251 RTN1Q16799 776 aa12.06□□□□□ -0.48
CPSF4-212ENST00000482251 GNPTABQ3T906 1256 aa12.06□□□□□ -0.48
CPSF4-212ENST00000482251 MYSM1Q5VVJ2 828 aa12.06□□□□□ -0.48
CPSF4-212ENST00000482251 SYNE3Q6ZMZ3 975 aa12.06□□□□□ -0.48
CPSF4-212ENST00000482251 SGMS1Q86VZ5 419 aa12.06□□□□□ -0.48
CPSF4-212ENST00000482251 SAMD3Q8N6K7 520 aa12.06□□□□□ -0.48
CPSF4-212ENST00000482251 C7orf31Q8N865 590 aa12.06□□□□□ -0.48
CPSF4-212ENST00000482251 CTAGE1Q96RT6 745 aa12.06□□□□□ -0.48
CPSF4-212ENST00000482251 MTIF3Q9H2K0 278 aaKnown RBP12.06□□□□□ -0.48
CPSF4-212ENST00000482251 MLXIPQ9HAP2 919 aa12.06□□□□□ -0.48
CPSF4-212ENST00000482251 PKD2L1Q9P0L9 805 aa12.06□□□□□ -0.48
CPSF4-212ENST00000482251 GTF2IRD1Q9UHL9 959 aa12.06□□□□□ -0.48
CPSF4-212ENST00000482251 TELO2Q9Y4R8 837 aa12.06□□□□□ -0.48
CPSF4-212ENST00000482251 NOP56O00567 594 aaKnown RBP12.05□□□□□ -0.48
CPSF4-212ENST00000482251 ZBTB43O43298 467 aa12.05□□□□□ -0.48
CPSF4-212ENST00000482251 IQCF3P0C7M6 154 aa12.05□□□□□ -0.48
CPSF4-212ENST00000482251 FOSL2P15408 326 aa12.05□□□□□ -0.48
CPSF4-212ENST00000482251 SMARCA1P28370 1054 aa12.05□□□□□ -0.48
CPSF4-212ENST00000482251 FGD1P98174 961 aa12.05□□□□□ -0.48
CPSF4-212ENST00000482251 ZNF200P98182 395 aaPredicted RBP12.05□□□□□ -0.48
CPSF4-212ENST00000482251 EXOSC10Q01780 885 aaKnown RBP12.05□□□□□ -0.48
CPSF4-212ENST00000482251 PTPN11Q06124 597 aaPredicted RBP12.05□□□□□ -0.48
CPSF4-212ENST00000482251 BFSP2Q13515 415 aa12.05□□□□□ -0.48
CPSF4-212ENST00000482251 GRIN2CQ14957 1233 aa12.05□□□□□ -0.48
CPSF4-212ENST00000482251 WWC2Q6AWC2 1192 aa12.05□□□□□ -0.48
CPSF4-212ENST00000482251 KCNV1Q6PIU1 500 aa12.05□□□□□ -0.48
CPSF4-212ENST00000482251 CYFIP1Q7L576 1253 aa12.05□□□□□ -0.48
CPSF4-212ENST00000482251 DHX32Q7L7V1 743 aaKnown RBP12.05□□□□□ -0.48
CPSF4-212ENST00000482251 TRIM50Q86XT4 487 aa12.05□□□□□ -0.48
CPSF4-212ENST00000482251 RETREG2Q8NC44 543 aa12.05□□□□□ -0.48
CPSF4-212ENST00000482251 DHX38Q92620 1227 aaKnown RBP12.05□□□□□ -0.48
CPSF4-212ENST00000482251 PGBD1Q96JS3 809 aa12.05□□□□□ -0.48
CPSF4-212ENST00000482251 JAKMIP1Q96N16 626 aaKnown RBP12.05□□□□□ -0.48
CPSF4-212ENST00000482251 INPP4AQ96PE3 977 aaPredicted RBP12.05□□□□□ -0.48
CPSF4-212ENST00000482251 KATNAL1Q9BW62 490 aa12.05□□□□□ -0.48
CPSF4-212ENST00000482251 FTOQ9C0B1 505 aaKnown RBP eCLIP12.05□□□□□ -0.48
CPSF4-212ENST00000482251 NKX2-4Q9H2Z4 354 aa12.05□□□□□ -0.48
CPSF4-212ENST00000482251 ZNF576Q9H609 170 aa12.05□□□□□ -0.48
CPSF4-212ENST00000482251 PSTPIP2Q9H939 334 aa12.05□□□□□ -0.48
CPSF4-212ENST00000482251 YBX2Q9Y2T7 364 aaKnown RBP12.05□□□□□ -0.48
CPSF4-212ENST00000482251 UNC80Q8N2C7 3258 aa12.04□□□□□ -0.48
CPSF4-212ENST00000482251 PIK3CDO00329 1044 aa12.04□□□□□ -0.48
CPSF4-212ENST00000482251 PITPNM1O00562 1244 aa12.04□□□□□ -0.48
CPSF4-212ENST00000482251 FIBPO43427 364 aa12.04□□□□□ -0.48
CPSF4-212ENST00000482251 LGALS2P05162 132 aa12.04□□□□□ -0.48
CPSF4-212ENST00000482251 MYOGP15173 224 aa12.04□□□□□ -0.48
CPSF4-212ENST00000482251 NAPAP54920 295 aa12.04□□□□□ -0.48
CPSF4-212ENST00000482251 APOBRQ0VD83 1088 aa12.04□□□□□ -0.48
CPSF4-212ENST00000482251 HIC1Q14526 733 aa12.04□□□□□ -0.48
CPSF4-212ENST00000482251 KRT32Q14532 448 aa12.04□□□□□ -0.48
CPSF4-212ENST00000482251 PCNX4Q63HM2 1172 aa12.04□□□□□ -0.48
CPSF4-212ENST00000482251 TYW1BQ6NUM6 668 aa12.04□□□□□ -0.48
CPSF4-212ENST00000482251 SESTD1Q86VW0 696 aa12.04□□□□□ -0.48
CPSF4-212ENST00000482251 RPUSD2Q8IZ73 545 aaKnown RBP12.04□□□□□ -0.48
CPSF4-212ENST00000482251 MAFAQ8NHW3 353 aaPredicted RBP12.04□□□□□ -0.48
CPSF4-212ENST00000482251 WNT8BQ93098 351 aa12.04□□□□□ -0.48
CPSF4-212ENST00000482251 RBM28Q9NW13 759 aaKnown RBP12.04□□□□□ -0.48
CPSF4-212ENST00000482251 SNX14Q9Y5W7 946 aa12.04□□□□□ -0.48
CPSF4-212ENST00000482251 SLC4A7Q9Y6M7 1214 aa12.04□□□□□ -0.48
CPSF4-212ENST00000482251 TRIP12Q14669 1992 aaPredicted RBP12.04□□□□□ -0.48
CPSF4-212ENST00000482251 TMEM265A0A087WTH1 108 aa12.03□□□□□ -0.48
CPSF4-212ENST00000482251 SPDYE3A6NKU9 549 aa12.03□□□□□ -0.48
CPSF4-212ENST00000482251 SPATA31C2B4DYI2 1134 aa12.03□□□□□ -0.48
CPSF4-212ENST00000482251 HAS3O00219 553 aa12.03□□□□□ -0.48
CPSF4-212ENST00000482251 PPFIA3O75145 1194 aa12.03□□□□□ -0.48
CPSF4-212ENST00000482251 TGFB3P10600 412 aa12.03□□□□□ -0.48
CPSF4-212ENST00000482251 HOXD8P13378 290 aaPredicted RBP12.03□□□□□ -0.48
CPSF4-212ENST00000482251 CDC27P30260 824 aa12.03□□□□□ -0.48
CPSF4-212ENST00000482251 UTP14CQ5TAP6 766 aaKnown RBP12.03□□□□□ -0.48
CPSF4-212ENST00000482251 Q6ZUG5 572 aa12.03□□□□□ -0.48
CPSF4-212ENST00000482251 LRRC8DQ7L1W4 858 aa12.03□□□□□ -0.48
CPSF4-212ENST00000482251 CCDC155Q8N6L0 562 aa12.03□□□□□ -0.48
CPSF4-212ENST00000482251 BRF1Q92994 677 aa12.03□□□□□ -0.48
CPSF4-212ENST00000482251 C16orf70Q9BSU1 422 aa12.03□□□□□ -0.48
CPSF4-212ENST00000482251 MSRAQ9UJ68 235 aa12.03□□□□□ -0.48
CPSF4-212ENST00000482251 TET1Q8NFU7 2136 aa12.02□□□□□ -0.48
CPSF4-212ENST00000482251 CUL9Q8IWT3 2517 aa12.02□□□□□ -0.48
CPSF4-212ENST00000482251 STAM2O75886 525 aa12.02□□□□□ -0.49
CPSF4-212ENST00000482251 PFKMP08237 780 aa12.02□□□□□ -0.49
CPSF4-212ENST00000482251 SMIM10L2AP0DMW4 78 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms