RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 TRMT13Q9NUP7 481 aaKnown RBP13.65□□□□□ -0.22
HMGN1-213ENST00000482192 TRIOBPQ9H2D6 2365 aa13.65□□□□□ -0.22
HMGN1-213ENST00000482192 BAZ2BQ9UIF8 2168 aaKnown RBP13.64□□□□□ -0.23
HMGN1-213ENST00000482192 SPATA31C2B4DYI2 1134 aa13.64□□□□□ -0.23
HMGN1-213ENST00000482192 STXBP3O00186 592 aa13.64□□□□□ -0.23
HMGN1-213ENST00000482192 EIF5BO60841 1220 aaKnown RBP13.64□□□□□ -0.23
HMGN1-213ENST00000482192 PPFIA4O75335 1185 aa13.64□□□□□ -0.23
HMGN1-213ENST00000482192 HOXD8P13378 290 aaPredicted RBP13.64□□□□□ -0.23
HMGN1-213ENST00000482192 CYP2C18P33260 490 aa13.64□□□□□ -0.23
HMGN1-213ENST00000482192 ADD1P35611 737 aaKnown RBP13.64□□□□□ -0.23
HMGN1-213ENST00000482192 ADCY7P51828 1080 aa13.64□□□□□ -0.23
HMGN1-213ENST00000482192 EPHB4P54760 987 aa13.64□□□□□ -0.23
HMGN1-213ENST00000482192 CHMP4BP1P59074 171 aa13.64□□□□□ -0.23
HMGN1-213ENST00000482192 SP2Q02086 613 aa13.64□□□□□ -0.23
HMGN1-213ENST00000482192 PPIGQ13427 754 aaKnown RBP eCLIP13.64□□□□□ -0.235e-19■■□□□ 12
HMGN1-213ENST00000482192 NEDD9Q14511 834 aa13.64□□□□□ -0.23
HMGN1-213ENST00000482192 UBE2SQ16763 222 aa13.64□□□□□ -0.23
HMGN1-213ENST00000482192 NLRX1Q86UT6 975 aa13.64□□□□□ -0.23
HMGN1-213ENST00000482192 SPATA33Q96N06 139 aa13.64□□□□□ -0.23
HMGN1-213ENST00000482192 NOC4LQ9BVI4 516 aaKnown RBP13.64□□□□□ -0.23
HMGN1-213ENST00000482192 KATNAL1Q9BW62 490 aa13.64□□□□□ -0.23
HMGN1-213ENST00000482192 GLT8D2Q9H1C3 349 aa13.64□□□□□ -0.23
HMGN1-213ENST00000482192 EHMT1Q9H9B1 1298 aa13.64□□□□□ -0.23
HMGN1-213ENST00000482192 MLXIPQ9HAP2 919 aa13.64□□□□□ -0.23
HMGN1-213ENST00000482192 RIC8AQ9NPQ8 531 aa13.64□□□□□ -0.23
HMGN1-213ENST00000482192 BARHL2Q9NY43 387 aa13.64□□□□□ -0.23
HMGN1-213ENST00000482192 RTEL1Q9NZ71 1219 aa13.64□□□□□ -0.23
HMGN1-213ENST00000482192 F2P00734 622 aa13.63□□□□□ -0.23
HMGN1-213ENST00000482192 ZNF286BP0CG31 522 aa13.63□□□□□ -0.23
HMGN1-213ENST00000482192 SCG2P13521 617 aa13.63□□□□□ -0.23
HMGN1-213ENST00000482192 CSF2RAP15509 400 aa13.63□□□□□ -0.23
HMGN1-213ENST00000482192 PFKFB3Q16875 520 aaPredicted RBP13.63□□□□□ -0.23
HMGN1-213ENST00000482192 HSDL1Q3SXM5 330 aa13.63□□□□□ -0.23
HMGN1-213ENST00000482192 TYW1BQ6NUM6 668 aa13.63□□□□□ -0.23
HMGN1-213ENST00000482192 METTL7BQ6UX53 244 aa13.63□□□□□ -0.23
HMGN1-213ENST00000482192 SESTD1Q86VW0 696 aa13.63□□□□□ -0.23
HMGN1-213ENST00000482192 GIMAP8Q8ND71 665 aaPredicted RBP13.63□□□□□ -0.23
HMGN1-213ENST00000482192 KAT2BQ92831 832 aa13.63□□□□□ -0.23
HMGN1-213ENST00000482192 CDHR1Q96JP9 859 aa13.63□□□□□ -0.23
HMGN1-213ENST00000482192 RNPC3Q96LT9 517 aaKnown RBP13.63□□□□□ -0.23
HMGN1-213ENST00000482192 UPF3BQ9BZI7 483 aaKnown RBP13.63□□□□□ -0.23
HMGN1-213ENST00000482192 PCDHA6Q9UN73 950 aa13.63□□□□□ -0.23
HMGN1-213ENST00000482192 NOD1Q9Y239 953 aa13.63□□□□□ -0.23
HMGN1-213ENST00000482192 PCDHA8Q9Y5H6 950 aa13.63□□□□□ -0.23
HMGN1-213ENST00000482192 SMCO2A6NFE2 343 aa13.62□□□□□ -0.23
HMGN1-213ENST00000482192 NOP56O00567 594 aaKnown RBP13.62□□□□□ -0.23
HMGN1-213ENST00000482192 SORBS3O60504 671 aa13.62□□□□□ -0.23
HMGN1-213ENST00000482192 FOSP01100 380 aaPredicted RBP13.62□□□□□ -0.23
HMGN1-213ENST00000482192 PDIA3P30101 505 aaKnown RBP13.62□□□□□ -0.23
HMGN1-213ENST00000482192 AKAP17AQ02040 695 aaKnown RBP13.62□□□□□ -0.23
HMGN1-213ENST00000482192 SEMA3FQ13275 785 aa13.62□□□□□ -0.23
HMGN1-213ENST00000482192 TOB2Q14106 344 aaPredicted RBP13.62□□□□□ -0.23
HMGN1-213ENST00000482192 MFSD10Q14728 455 aa13.62□□□□□ -0.23
HMGN1-213ENST00000482192 PSRC1Q6PGN9 363 aaPredicted RBP13.62□□□□□ -0.23
HMGN1-213ENST00000482192 C7orf31Q8N865 590 aa13.62□□□□□ -0.23
HMGN1-213ENST00000482192 CCDC12Q8WUD4 166 aaPredicted RBP13.62□□□□□ -0.23
HMGN1-213ENST00000482192 GPRASP2Q96D09 838 aa13.62□□□□□ -0.23
HMGN1-213ENST00000482192 SENP7Q9BQF6 1050 aa13.62□□□□□ -0.23
HMGN1-213ENST00000482192 UMODL1Q5DID0 1318 aa13.62□□□□□ -0.23
HMGN1-213ENST00000482192 RANBP2P49792 3224 aaKnown RBP13.62□□□□□ -0.23
HMGN1-213ENST00000482192 SCN10AQ9Y5Y9 1956 aa13.62□□□□□ -0.23
HMGN1-213ENST00000482192 PRPF3O43395 683 aaKnown RBP13.61□□□□□ -0.23
HMGN1-213ENST00000482192 CYP2C9P11712 490 aa13.61□□□□□ -0.23
HMGN1-213ENST00000482192 ITGB5P18084 799 aa13.61□□□□□ -0.23
HMGN1-213ENST00000482192 PSEN2P49810 448 aa13.61□□□□□ -0.23
HMGN1-213ENST00000482192 ANAPC15P60006 121 aa13.61□□□□□ -0.23
HMGN1-213ENST00000482192 AP3B2Q13367 1082 aa13.61□□□□□ -0.23
HMGN1-213ENST00000482192 MTMR1Q13613 665 aa13.61□□□□□ -0.23
HMGN1-213ENST00000482192 PTGISQ16647 500 aa13.61□□□□□ -0.23
HMGN1-213ENST00000482192 KIAA0753Q2KHM9 967 aa13.61□□□□□ -0.23
HMGN1-213ENST00000482192 PPP1R13LQ8WUF5 828 aa13.61□□□□□ -0.23
HMGN1-213ENST00000482192 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.61□□□□□ -0.235e-10■■■□□ 16.5
HMGN1-213ENST00000482192 RNF26Q9BY78 433 aaPredicted RBP13.61□□□□□ -0.23
HMGN1-213ENST00000482192 WNT8AQ9H1J5 351 aa13.61□□□□□ -0.23
HMGN1-213ENST00000482192 IL23AQ9NPF7 189 aa13.61□□□□□ -0.23
HMGN1-213ENST00000482192 PDRG1Q9NUG6 133 aa13.61□□□□□ -0.23
HMGN1-213ENST00000482192 GTF2IRD1Q9UHL9 959 aa13.61□□□□□ -0.23
HMGN1-213ENST00000482192 UBIAD1Q9Y5Z9 338 aa13.61□□□□□ -0.23
HMGN1-213ENST00000482192 ESYT2A0FGR8 921 aa13.6□□□□□ -0.23
HMGN1-213ENST00000482192 HAS3O00219 553 aa13.6□□□□□ -0.23
HMGN1-213ENST00000482192 PITPNM1O00562 1244 aa13.6□□□□□ -0.23
HMGN1-213ENST00000482192 MAFGO15525 162 aa13.6□□□□□ -0.23
HMGN1-213ENST00000482192 IFNAR1P17181 557 aa13.6□□□□□ -0.23
HMGN1-213ENST00000482192 CCL23P55773 120 aa13.6□□□□□ -0.23
HMGN1-213ENST00000482192 CCT2P78371 535 aaKnown RBP13.6□□□□□ -0.23
HMGN1-213ENST00000482192 BFSP2Q13515 415 aa13.6□□□□□ -0.23
HMGN1-213ENST00000482192 NTRK3Q16288 839 aa13.6□□□□□ -0.23
HMGN1-213ENST00000482192 MCTP2Q6DN12 878 aa13.6□□□□□ -0.23
HMGN1-213ENST00000482192 C16orf59Q7L2K0 433 aa13.6□□□□□ -0.23
HMGN1-213ENST00000482192 CYFIP1Q7L576 1253 aa13.6□□□□□ -0.23
HMGN1-213ENST00000482192 CCDC155Q8N6L0 562 aa13.6□□□□□ -0.23
HMGN1-213ENST00000482192 PHKBQ93100 1093 aa13.6□□□□□ -0.23
HMGN1-213ENST00000482192 ZNF274Q96GC6 653 aaPredicted RBP13.6□□□□□ -0.23
HMGN1-213ENST00000482192 C16orf70Q9BSU1 422 aa13.6□□□□□ -0.23
HMGN1-213ENST00000482192 ALG1Q9BT22 464 aa13.6□□□□□ -0.23
HMGN1-213ENST00000482192 ANO3Q9BYT9 981 aa13.6□□□□□ -0.23
HMGN1-213ENST00000482192 BCAS3Q9H6U6 928 aa13.6□□□□□ -0.23
HMGN1-213ENST00000482192 NCOA5Q9HCD5 579 aaKnown RBP13.6□□□□□ -0.23
HMGN1-213ENST00000482192 C6orf50Q9HD87 102 aa13.6□□□□□ -0.23
HMGN1-213ENST00000482192 H3BRB1 525 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms