RNA–Protein interactions for RNA: ENST00000482000.1

PRKCB-206, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 541 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-206ENST00000482000 RNF4P78317 190 aa6.55□□□□□ -1.36
PRKCB-206ENST00000482000 TEFQ10587 303 aa6.55□□□□□ -1.36
PRKCB-206ENST00000482000 RAB33AQ14088 237 aa6.55□□□□□ -1.36
PRKCB-206ENST00000482000 NKPD1Q17RQ9 610 aa6.55□□□□□ -1.36
PRKCB-206ENST00000482000 PPFIBP1Q86W92 1011 aa6.55□□□□□ -1.36
PRKCB-206ENST00000482000 CKAP2LQ8IYA6 745 aa6.55□□□□□ -1.36
PRKCB-206ENST00000482000 HNRNPLLQ8WVV9 542 aaKnown RBP6.55□□□□□ -1.36
PRKCB-206ENST00000482000 UBXN4Q92575 508 aa6.55□□□□□ -1.36
PRKCB-206ENST00000482000 ZNF512BQ96KM6 892 aaPredicted RBP6.55□□□□□ -1.36
PRKCB-206ENST00000482000 NUP98P52948 1817 aa6.55□□□□□ -1.36
PRKCB-206ENST00000482000 WDR90Q96KV7 1748 aa6.54□□□□□ -1.36
PRKCB-206ENST00000482000 KCNQ3O43525 872 aa6.54□□□□□ -1.36
PRKCB-206ENST00000482000 STARD3NLO95772 234 aa6.54□□□□□ -1.36
PRKCB-206ENST00000482000 CANXP27824 592 aaKnown RBP6.54□□□□□ -1.36
PRKCB-206ENST00000482000 CHMP4BP1P59074 171 aa6.54□□□□□ -1.36
PRKCB-206ENST00000482000 TNK2Q07912 1038 aa6.54□□□□□ -1.36
PRKCB-206ENST00000482000 NBPF9Q3BBW0 867 aa6.54□□□□□ -1.36
PRKCB-206ENST00000482000 BBS9Q3SYG4 887 aa6.54□□□□□ -1.36
PRKCB-206ENST00000482000 ANKRD39Q53RE8 183 aa6.54□□□□□ -1.36
PRKCB-206ENST00000482000 ARHGAP27Q6ZUM4 889 aa6.54□□□□□ -1.36
PRKCB-206ENST00000482000 SPACA3Q8IXA5 215 aa6.54□□□□□ -1.36
PRKCB-206ENST00000482000 TTC5Q8N0Z6 440 aa6.54□□□□□ -1.36
PRKCB-206ENST00000482000 MFSD4AQ8N468 514 aa6.54□□□□□ -1.36
PRKCB-206ENST00000482000 NETO1Q8TDF5 533 aa6.54□□□□□ -1.36
PRKCB-206ENST00000482000 KLHL6Q8WZ60 621 aa6.54□□□□□ -1.36
PRKCB-206ENST00000482000 PCDHB10Q9UN67 800 aa6.54□□□□□ -1.36
PRKCB-206ENST00000482000 PCNTO95613 3336 aa6.54□□□□□ -1.36
PRKCB-206ENST00000482000 COBLO75128 1261 aa6.53□□□□□ -1.36
PRKCB-206ENST00000482000 MED26O95402 600 aa6.53□□□□□ -1.36
PRKCB-206ENST00000482000 A1BGP04217 495 aa6.53□□□□□ -1.36
PRKCB-206ENST00000482000 SERPINB2P05120 415 aa6.53□□□□□ -1.36
PRKCB-206ENST00000482000 CEACAM5P06731 702 aa6.53□□□□□ -1.36
PRKCB-206ENST00000482000 HSPA6P17066 643 aa6.53□□□□□ -1.36
PRKCB-206ENST00000482000 PRELPP51888 382 aa6.53□□□□□ -1.36
PRKCB-206ENST00000482000 SLC7A5Q01650 507 aa6.53□□□□□ -1.36
PRKCB-206ENST00000482000 FXNQ16595 210 aa6.53□□□□□ -1.36
PRKCB-206ENST00000482000 MSMPQ1L6U9 139 aa6.53□□□□□ -1.36
PRKCB-206ENST00000482000 DALRD3Q5D0E6 543 aaKnown RBP6.53□□□□□ -1.36
PRKCB-206ENST00000482000 SOGA3Q5TF21 947 aa6.53□□□□□ -1.36
PRKCB-206ENST00000482000 TBC1D9BQ66K14 1250 aa6.53□□□□□ -1.36
PRKCB-206ENST00000482000 PLD6Q8N2A8 252 aaKnown RBP6.53□□□□□ -1.36
PRKCB-206ENST00000482000 CELF2-AS1Q8N7Q2 184 aa6.53□□□□□ -1.36
PRKCB-206ENST00000482000 DTWD2Q8NBA8 298 aa6.53□□□□□ -1.36
PRKCB-206ENST00000482000 PIWIL2Q8TC59 973 aaKnown RBP6.53□□□□□ -1.36
PRKCB-206ENST00000482000 MICAL1Q8TDZ2 1067 aa6.53□□□□□ -1.36
PRKCB-206ENST00000482000 CFAP53Q96M91 514 aa6.53□□□□□ -1.36
PRKCB-206ENST00000482000 FMNL2Q96PY5 1086 aa6.53□□□□□ -1.36
PRKCB-206ENST00000482000 KCNH3Q9ULD8 1083 aa6.53□□□□□ -1.36
PRKCB-206ENST00000482000 R3HCC1Q9Y3T6 440 aaKnown RBP6.53□□□□□ -1.36
PRKCB-206ENST00000482000 ST14Q9Y5Y6 855 aa6.53□□□□□ -1.36
PRKCB-206ENST00000482000 PRAMEF22A3QJZ6 481 aa6.52□□□□□ -1.37
PRKCB-206ENST00000482000 BTBD11A6QL63 1104 aa6.52□□□□□ -1.37
PRKCB-206ENST00000482000 CAMTA2O94983 1202 aa6.52□□□□□ -1.37
PRKCB-206ENST00000482000 U2AF1L5P0DN76 240 aaPredicted RBP6.52□□□□□ -1.37
PRKCB-206ENST00000482000 SRFP11831 508 aa6.52□□□□□ -1.37
PRKCB-206ENST00000482000 ITIH2P19823 946 aa6.52□□□□□ -1.37
PRKCB-206ENST00000482000 GRIK1P39086 918 aa6.52□□□□□ -1.37
PRKCB-206ENST00000482000 IL6STP40189 918 aaPredicted RBP6.52□□□□□ -1.37
PRKCB-206ENST00000482000 U2AF1Q01081 240 aaKnown RBP eCLIP6.52□□□□□ -1.37
PRKCB-206ENST00000482000 AUHQ13825 339 aaKnown RBP6.52□□□□□ -1.37
PRKCB-206ENST00000482000 DCTN1Q14203 1278 aa6.52□□□□□ -1.37
PRKCB-206ENST00000482000 IFI16Q16666 785 aaKnown RBP6.52□□□□□ -1.37
PRKCB-206ENST00000482000 GNPTABQ3T906 1256 aa6.52□□□□□ -1.37
PRKCB-206ENST00000482000 AXDND1Q5T1B0 1012 aaPredicted RBP6.52□□□□□ -1.37
PRKCB-206ENST00000482000 TDRD10Q5VZ19 366 aaKnown RBP6.52□□□□□ -1.37
PRKCB-206ENST00000482000 VHLLQ6RSH7 139 aa6.52□□□□□ -1.37
PRKCB-206ENST00000482000 MCM10Q7L590 875 aa6.52□□□□□ -1.37
PRKCB-206ENST00000482000 DNAJC2Q99543 621 aaKnown RBP6.52□□□□□ -1.37
PRKCB-206ENST00000482000 TEX13AQ9BXU3 409 aaPredicted RBP6.52□□□□□ -1.37
PRKCB-206ENST00000482000 GPR62Q9BZJ7 368 aa6.52□□□□□ -1.37
PRKCB-206ENST00000482000 MKRN2Q9H000 416 aaKnown RBP6.52□□□□□ -1.37
PRKCB-206ENST00000482000 DUSP15Q9H1R2 295 aaPredicted RBP6.52□□□□□ -1.37
PRKCB-206ENST00000482000 NMRK2Q9NPI5 230 aa6.52□□□□□ -1.37
PRKCB-206ENST00000482000 USP16Q9Y5T5 823 aa6.52□□□□□ -1.37
PRKCB-206ENST00000482000 SNX11Q9Y5W9 270 aa6.52□□□□□ -1.37
PRKCB-206ENST00000482000 TMEM265A0A087WTH1 108 aa6.51□□□□□ -1.37
PRKCB-206ENST00000482000 A0A087WZG4 1122 aa6.51□□□□□ -1.37
PRKCB-206ENST00000482000 FAM155AB1AL88 458 aaPredicted RBP6.51□□□□□ -1.37
PRKCB-206ENST00000482000 SHOXO15266 292 aa6.51□□□□□ -1.37
PRKCB-206ENST00000482000 TP53P04637 393 aaPredicted RBP6.51□□□□□ -1.37
PRKCB-206ENST00000482000 PIP4K2AP48426 406 aaPredicted RBP6.51□□□□□ -1.37
PRKCB-206ENST00000482000 CD97P48960 835 aa6.51□□□□□ -1.37
PRKCB-206ENST00000482000 NCAPHQ15003 741 aa6.51□□□□□ -1.37
PRKCB-206ENST00000482000 LARP1BQ659C4 914 aaKnown RBP6.51□□□□□ -1.37
PRKCB-206ENST00000482000 PRR5LQ6MZQ0 368 aa6.51□□□□□ -1.37
PRKCB-206ENST00000482000 KIAA1211LQ6NV74 962 aa6.51□□□□□ -1.37
PRKCB-206ENST00000482000 C6orf15Q6UXA7 325 aaPredicted RBP6.51□□□□□ -1.37
PRKCB-206ENST00000482000 FAM178BQ8IXR5 827 aa6.51□□□□□ -1.37
PRKCB-206ENST00000482000 CCDC144CPQ8IYA2 1237 aa6.51□□□□□ -1.37
PRKCB-206ENST00000482000 C7orf61Q8IZ16 206 aa6.51□□□□□ -1.37
PRKCB-206ENST00000482000 PLEKHF1Q96S99 279 aa6.51□□□□□ -1.37
PRKCB-206ENST00000482000 RNF181Q9P0P0 153 aa6.51□□□□□ -1.37
PRKCB-206ENST00000482000 NUDCQ9Y266 331 aa6.51□□□□□ -1.37
PRKCB-206ENST00000482000 ANKRD36CQ5JPF3 1778 aa6.5□□□□□ -1.37
PRKCB-206ENST00000482000 CBFA2T2O43439 604 aa6.5□□□□□ -1.37
PRKCB-206ENST00000482000 HTATSF1O43719 755 aaKnown RBP6.5□□□□□ -1.37
PRKCB-206ENST00000482000 DDAH1O94760 285 aa6.5□□□□□ -1.37
PRKCB-206ENST00000482000 TOMM70O94826 608 aa6.5□□□□□ -1.37
PRKCB-206ENST00000482000 GJB6O95452 261 aa6.5□□□□□ -1.37
PRKCB-206ENST00000482000 CLCN7P51798 805 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms