RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 PRMT2P55345 433 aa13.14□□□□□ -0.31
HPS4-212ENST00000481910 IRF5Q13568 498 aa13.14□□□□□ -0.31
HPS4-212ENST00000481910 OLFML2BQ68BL8 750 aa13.14□□□□□ -0.31
HPS4-212ENST00000481910 MORC4Q8TE76 937 aa13.14□□□□□ -0.31
HPS4-212ENST00000481910 NAP1L4Q99733 375 aaKnown RBP13.14□□□□□ -0.31
HPS4-212ENST00000481910 GTPBP4Q9BZE4 634 aaKnown RBP13.14□□□□□ -0.31
HPS4-212ENST00000481910 FAM86B1E9PN63 330 aa13.13□□□□□ -0.31
HPS4-212ENST00000481910 STAM2O75886 525 aa13.13□□□□□ -0.31
HPS4-212ENST00000481910 FAM86B2P0C5J1 330 aa13.13□□□□□ -0.31
HPS4-212ENST00000481910 CIITAP33076 1130 aa13.13□□□□□ -0.31
HPS4-212ENST00000481910 ZNF174Q15697 407 aa13.13□□□□□ -0.31
HPS4-212ENST00000481910 CEP55Q53EZ4 464 aa13.13□□□□□ -0.31
HPS4-212ENST00000481910 TTC38Q5R3I4 469 aa13.13□□□□□ -0.31
HPS4-212ENST00000481910 PPP4R3AQ6IN85 833 aa13.13□□□□□ -0.31
HPS4-212ENST00000481910 TRMT44Q8IYL2 757 aaKnown RBP13.13□□□□□ -0.31
HPS4-212ENST00000481910 CYP2W1Q8TAV3 490 aa13.13□□□□□ -0.31
HPS4-212ENST00000481910 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.13□□□□□ -0.31
HPS4-212ENST00000481910 PCDHB6Q9Y5E3 794 aa13.13□□□□□ -0.31
HPS4-212ENST00000481910 SYNGAP1Q96PV0 1343 aa13.13□□□□□ -0.31
HPS4-212ENST00000481910 WNT7AO00755 349 aa13.13□□□□□ -0.31
HPS4-212ENST00000481910 GTPBP6O43824 516 aaPredicted RBP13.13□□□□□ -0.31
HPS4-212ENST00000481910 ADCY3O60266 1144 aa13.13□□□□□ -0.31
HPS4-212ENST00000481910 TDP2O95551 362 aa13.13□□□□□ -0.31
HPS4-212ENST00000481910 SNAI1O95863 264 aaPredicted RBP13.13□□□□□ -0.31
HPS4-212ENST00000481910 GCFC2P16383 781 aaKnown RBP13.13□□□□□ -0.31
HPS4-212ENST00000481910 ITGB5P18084 799 aa13.13□□□□□ -0.31
HPS4-212ENST00000481910 CYP2C19P33261 490 aa13.13□□□□□ -0.31
HPS4-212ENST00000481910 MCM7P33993 719 aa13.13□□□□□ -0.31
HPS4-212ENST00000481910 PRR16Q569H4 304 aa13.13□□□□□ -0.31
HPS4-212ENST00000481910 MOXD1Q6UVY6 613 aa13.13□□□□□ -0.31
HPS4-212ENST00000481910 TRIB2Q92519 343 aa13.13□□□□□ -0.31
HPS4-212ENST00000481910 MXRA8Q9BRK3 442 aa13.13□□□□□ -0.31
HPS4-212ENST00000481910 WDR11Q9BZH6 1224 aa13.13□□□□□ -0.31
HPS4-212ENST00000481910 DDX25Q9UHL0 483 aaKnown RBP13.13□□□□□ -0.31
HPS4-212ENST00000481910 CNPY2Q9Y2B0 182 aa13.13□□□□□ -0.31
HPS4-212ENST00000481910 UBIAD1Q9Y5Z9 338 aa13.13□□□□□ -0.31
HPS4-212ENST00000481910 CYP3A7-CYP3A51PA0A087WV96 503 aa13.12□□□□□ -0.31
HPS4-212ENST00000481910 LETM1O95202 739 aaPredicted RBP13.12□□□□□ -0.31
HPS4-212ENST00000481910 ELNP15502 786 aa13.12□□□□□ -0.31
HPS4-212ENST00000481910 CYP3A7P24462 503 aa13.12□□□□□ -0.31
HPS4-212ENST00000481910 CEBPZQ03701 1054 aaKnown RBP13.12□□□□□ -0.31
HPS4-212ENST00000481910 DNTTIP2Q5QJE6 756 aaKnown RBP13.12□□□□□ -0.31
HPS4-212ENST00000481910 MFSD14CQ5VZR4 134 aa13.12□□□□□ -0.31
HPS4-212ENST00000481910 SEPT14Q6ZU15 432 aa13.12□□□□□ -0.31
HPS4-212ENST00000481910 NLRX1Q86UT6 975 aa13.12□□□□□ -0.31
HPS4-212ENST00000481910 FBXO16Q8IX29 292 aaPredicted RBP13.12□□□□□ -0.31
HPS4-212ENST00000481910 PXYLP1Q8TE99 480 aa13.12□□□□□ -0.31
HPS4-212ENST00000481910 ZNF396Q96N95 335 aaPredicted RBP13.12□□□□□ -0.31
HPS4-212ENST00000481910 ABHD16BQ9H3Z7 469 aa13.12□□□□□ -0.31
HPS4-212ENST00000481910 TFIP11Q9UBB9 837 aaKnown RBP13.12□□□□□ -0.31
HPS4-212ENST00000481910 MEIS1O00470 390 aa13.11□□□□□ -0.31
HPS4-212ENST00000481910 RGS20O76081 388 aa13.11□□□□□ -0.31
HPS4-212ENST00000481910 TERF1P54274 439 aa13.11□□□□□ -0.31
HPS4-212ENST00000481910 MTMR1Q13613 665 aa13.11□□□□□ -0.31
HPS4-212ENST00000481910 GNPTABQ3T906 1256 aa13.11□□□□□ -0.31
HPS4-212ENST00000481910 PLA2G4DQ86XP0 818 aa13.11□□□□□ -0.31
HPS4-212ENST00000481910 EGFL6Q8IUX8 553 aa13.11□□□□□ -0.31
HPS4-212ENST00000481910 INPP4AQ96PE3 977 aaPredicted RBP13.11□□□□□ -0.31
HPS4-212ENST00000481910 JADE2Q9NQC1 790 aa13.11□□□□□ -0.31
HPS4-212ENST00000481910 PTPN22Q9Y2R2 807 aa13.11□□□□□ -0.31
HPS4-212ENST00000481910 PTCH2Q9Y6C5 1203 aa13.11□□□□□ -0.31
HPS4-212ENST00000481910 KIAA1217Q5T5P2 1943 aa13.11□□□□□ -0.31
HPS4-212ENST00000481910 MYH15Q9Y2K3 1946 aa13.11□□□□□ -0.31
HPS4-212ENST00000481910 IGLV3-22A0A075B6J6 115 aa13.11□□□□□ -0.31
HPS4-212ENST00000481910 SLC37A4O43826 429 aa13.11□□□□□ -0.31
HPS4-212ENST00000481910 IGHA2P01877 340 aa13.11□□□□□ -0.31
HPS4-212ENST00000481910 DNM1Q05193 864 aaKnown RBP13.11□□□□□ -0.31
HPS4-212ENST00000481910 ACVR2BQ13705 512 aa13.11□□□□□ -0.31
HPS4-212ENST00000481910 SF3A1Q15459 793 aaKnown RBP13.11□□□□□ -0.31
HPS4-212ENST00000481910 Q4G0T1 1027 aa13.11□□□□□ -0.31
HPS4-212ENST00000481910 PRAMEF19Q5SWL8 479 aa13.11□□□□□ -0.31
HPS4-212ENST00000481910 CTU1Q7Z7A3 348 aaKnown RBP13.11□□□□□ -0.31
HPS4-212ENST00000481910 GPRASP2Q96D09 838 aa13.11□□□□□ -0.31
HPS4-212ENST00000481910 FTOQ9C0B1 505 aaKnown RBP eCLIP13.11□□□□□ -0.31
HPS4-212ENST00000481910 SLC24A3Q9HC58 644 aa13.11□□□□□ -0.31
HPS4-212ENST00000481910 VTA1Q9NP79 307 aa13.11□□□□□ -0.31
HPS4-212ENST00000481910 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.11□□□□□ -0.31
HPS4-212ENST00000481910 KCNH7Q9NS40 1196 aa13.11□□□□□ -0.31
HPS4-212ENST00000481910 NEMFO60524 1076 aa13.1□□□□□ -0.31
HPS4-212ENST00000481910 ARP10275 920 aa13.1□□□□□ -0.31
HPS4-212ENST00000481910 GRK4P32298 578 aa13.1□□□□□ -0.31
HPS4-212ENST00000481910 ANO1Q5XXA6 986 aa13.1□□□□□ -0.31
HPS4-212ENST00000481910 ATL3Q6DD88 541 aa13.1□□□□□ -0.31
HPS4-212ENST00000481910 NIPA1Q7RTP0 329 aa13.1□□□□□ -0.31
HPS4-212ENST00000481910 SLAIN1Q8ND83 568 aa13.1□□□□□ -0.31
HPS4-212ENST00000481910 TNPO1Q92973 898 aaKnown RBP13.1□□□□□ -0.31
HPS4-212ENST00000481910 CHAMP1Q96JM3 812 aa13.1□□□□□ -0.31
HPS4-212ENST00000481910 MBOAT7Q96N66 472 aa13.1□□□□□ -0.31
HPS4-212ENST00000481910 USP28Q96RU2 1077 aa13.1□□□□□ -0.31
HPS4-212ENST00000481910 PDGFCQ9NRA1 345 aa13.1□□□□□ -0.31
HPS4-212ENST00000481910 ZHX1Q9UKY1 873 aaPredicted RBP13.1□□□□□ -0.31
HPS4-212ENST00000481910 CFAP45Q9UL16 551 aa13.1□□□□□ -0.31
HPS4-212ENST00000481910 CLIC4Q9Y696 253 aa13.1□□□□□ -0.31
HPS4-212ENST00000481910 TCHHQ07283 1943 aa13.1□□□□□ -0.31
HPS4-212ENST00000481910 LRRC37A2A6NM11 1700 aa13.1□□□□□ -0.31
HPS4-212ENST00000481910 FIBPO43427 364 aa13.09□□□□□ -0.31
HPS4-212ENST00000481910 MARCH6O60337 910 aa13.09□□□□□ -0.31
HPS4-212ENST00000481910 HMGCRP04035 888 aa13.09□□□□□ -0.31
HPS4-212ENST00000481910 PTGDRQ13258 359 aa13.09□□□□□ -0.31
HPS4-212ENST00000481910 ORC2Q13416 577 aaPredicted RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms