RNA–Protein interactions for RNA: ENST00000481212.5

SPTA1-205, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-205ENST00000481212 ARHGEF39Q8N4T4 335 aa8.87□□□□□ -0.99
SPTA1-205ENST00000481212 CRACR2BQ8N4Y2 399 aaPredicted RBP8.87□□□□□ -0.99
SPTA1-205ENST00000481212 ZNF513Q8N8E2 541 aaPredicted RBP8.87□□□□□ -0.99
SPTA1-205ENST00000481212 ZSWIM2Q8NEG5 633 aa8.87□□□□□ -0.99
SPTA1-205ENST00000481212 ADCY4Q8NFM4 1077 aa8.87□□□□□ -0.99
SPTA1-205ENST00000481212 PIWIL2Q8TC59 973 aaKnown RBP8.87□□□□□ -0.99
SPTA1-205ENST00000481212 ENOX1Q8TC92 643 aaKnown RBP8.87□□□□□ -0.99
SPTA1-205ENST00000481212 SYTL5Q8TDW5 730 aaPredicted RBP8.87□□□□□ -0.99
SPTA1-205ENST00000481212 IPO9Q96P70 1041 aaKnown RBP8.87□□□□□ -0.99
SPTA1-205ENST00000481212 TMEM260Q9NX78 707 aa8.87□□□□□ -0.99
SPTA1-205ENST00000481212 GFOD1Q9NXC2 390 aa8.87□□□□□ -0.99
SPTA1-205ENST00000481212 FHOD1Q9Y613 1164 aa8.87□□□□□ -0.99
SPTA1-205ENST00000481212 RTL1A6NKG5 1358 aa8.86□□□□□ -0.99
SPTA1-205ENST00000481212 FLT4P35916 1363 aa8.86□□□□□ -0.99
SPTA1-205ENST00000481212 PRR33A8MZF0 331 aa8.86□□□□□ -0.99
SPTA1-205ENST00000481212 ZNF865P0CJ78 1059 aaPredicted RBP8.86□□□□□ -0.99
SPTA1-205ENST00000481212 PHKG2P15735 406 aa8.86□□□□□ -0.99
SPTA1-205ENST00000481212 HTRA3P83110 453 aa8.86□□□□□ -0.99
SPTA1-205ENST00000481212 SNW1Q13573 536 aaKnown RBP8.86□□□□□ -0.99
SPTA1-205ENST00000481212 CLEC16AQ2KHT3 1053 aa8.86□□□□□ -0.99
SPTA1-205ENST00000481212 SLC51AQ86UW1 340 aa8.86□□□□□ -0.99
SPTA1-205ENST00000481212 IFNL2Q8IZJ0 200 aa8.86□□□□□ -0.99
SPTA1-205ENST00000481212 MFSD4AQ8N468 514 aa8.86□□□□□ -0.99
SPTA1-205ENST00000481212 SHKBP1Q8TBC3 707 aa8.86□□□□□ -0.99
SPTA1-205ENST00000481212 DSCC1Q9BVC3 393 aa8.86□□□□□ -0.99
SPTA1-205ENST00000481212 NMRK2Q9NPI5 230 aa8.86□□□□□ -0.99
SPTA1-205ENST00000481212 SF3B6Q9Y3B4 125 aaKnown RBP8.86□□□□□ -0.99
SPTA1-205ENST00000481212 EMC9Q9Y3B6 208 aa8.86□□□□□ -0.99
SPTA1-205ENST00000481212 PTCH2Q9Y6C5 1203 aa8.86□□□□□ -0.99
SPTA1-205ENST00000481212 CAPN6Q9Y6Q1 641 aa8.86□□□□□ -0.99
SPTA1-205ENST00000481212 UTRNP46939 3433 aa8.86□□□□□ -0.99
SPTA1-205ENST00000481212 CHD4Q14839 1912 aa8.86□□□□□ -0.99
SPTA1-205ENST00000481212 SHANK3Q9BYB0 1731 aa8.85□□□□□ -0.99
SPTA1-205ENST00000481212 TRAV20A0A0B4J274 112 aa8.85□□□□□ -0.99
SPTA1-205ENST00000481212 CCDC163A0A0D9SF12 145 aa8.85□□□□□ -0.99
SPTA1-205ENST00000481212 RBAK-RBAKDNI3L0D1 243 aa8.85□□□□□ -0.99
SPTA1-205ENST00000481212 SIGLEC6O43699 453 aa8.85□□□□□ -0.99
SPTA1-205ENST00000481212 ADCY3O60266 1144 aa8.85□□□□□ -0.99
SPTA1-205ENST00000481212 FSTP19883 344 aa8.85□□□□□ -0.99
SPTA1-205ENST00000481212 HMGB2P26583 209 aaKnown RBP8.85□□□□□ -0.99
SPTA1-205ENST00000481212 PPP2R2AP63151 447 aa8.85□□□□□ -0.99
SPTA1-205ENST00000481212 TNK2Q07912 1038 aa8.85□□□□□ -0.99
SPTA1-205ENST00000481212 NMIQ13287 307 aaPredicted RBP8.85□□□□□ -0.99
SPTA1-205ENST00000481212 PPP2R5DQ14738 602 aa8.85□□□□□ -0.99
SPTA1-205ENST00000481212 TMC3Q7Z5M5 1100 aa8.85□□□□□ -0.99
SPTA1-205ENST00000481212 FIBCD1Q8N539 461 aa8.85□□□□□ -0.99
SPTA1-205ENST00000481212 CDC6Q99741 560 aa8.85□□□□□ -0.99
SPTA1-205ENST00000481212 NOL6Q9H6R4 1146 aaKnown RBP8.85□□□□□ -0.99
SPTA1-205ENST00000481212 CHST7Q9NS84 486 aa8.85□□□□□ -0.99
SPTA1-205ENST00000481212 POLKQ9UBT6 870 aa8.85□□□□□ -0.99
SPTA1-205ENST00000481212 RFC4P35249 363 aa8.84□□□□□ -0.99
SPTA1-205ENST00000481212 EIF4A2Q14240 407 aaKnown RBP8.84□□□□□ -0.99
SPTA1-205ENST00000481212 PLEKHG4Q58EX7 1191 aa8.84□□□□□ -0.99
SPTA1-205ENST00000481212 GPAT2Q6NUI2 795 aa8.84□□□□□ -0.99
SPTA1-205ENST00000481212 ZNF662Q6ZS27 426 aa8.84□□□□□ -0.99
SPTA1-205ENST00000481212 C16orf86Q6ZW13 317 aa8.84□□□□□ -0.99
SPTA1-205ENST00000481212 ZNF227Q86WZ6 799 aa8.84□□□□□ -0.99
SPTA1-205ENST00000481212 DOT1LQ8TEK3 1739 aa8.84□□□□□ -0.99
SPTA1-205ENST00000481212 MRGPRX3Q96LB0 322 aa8.84□□□□□ -0.99
SPTA1-205ENST00000481212 AARSD1Q9BTE6 412 aaKnown RBP8.84□□□□□ -0.99
SPTA1-205ENST00000481212 NSD3Q9BZ95 1437 aa8.84□□□□□ -0.99
SPTA1-205ENST00000481212 MKNK2Q9HBH9 465 aa8.84□□□□□ -0.99
SPTA1-205ENST00000481212 SRP68Q9UHB9 627 aaKnown RBP8.84□□□□□ -0.99
SPTA1-205ENST00000481212 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.84□□□□□ -0.99
SPTA1-205ENST00000481212 FAM208AQ9UK61 1670 aaKnown RBP8.84□□□□□ -0.99
SPTA1-205ENST00000481212 WASHC2AQ641Q2 1341 aa8.83□□□□□ -1
SPTA1-205ENST00000481212 OXCT1P55809 520 aa8.83□□□□□ -1
SPTA1-205ENST00000481212 TMEM67Q5HYA8 995 aa8.83□□□□□ -1
SPTA1-205ENST00000481212 ZNF530Q6P9A1 599 aaPredicted RBP8.83□□□□□ -1
SPTA1-205ENST00000481212 SCUBE1Q8IWY4 988 aa8.83□□□□□ -1
SPTA1-205ENST00000481212 LGR4Q9BXB1 951 aa8.83□□□□□ -1
SPTA1-205ENST00000481212 GPR62Q9BZJ7 368 aa8.83□□□□□ -1
SPTA1-205ENST00000481212 SLKQ9H2G2 1235 aaPredicted RBP8.83□□□□□ -1
SPTA1-205ENST00000481212 TRIT1Q9H3H1 467 aaKnown RBP8.83□□□□□ -1
SPTA1-205ENST00000481212 LRRC4CQ9HCJ2 640 aa8.83□□□□□ -1
SPTA1-205ENST00000481212 GPATCH2Q9NW75 528 aa8.83□□□□□ -1
SPTA1-205ENST00000481212 CGGBP1Q9UFW8 167 aaPredicted RBP8.83□□□□□ -1
SPTA1-205ENST00000481212 RGPD2P0DJD1 1756 aa8.83□□□□□ -1
SPTA1-205ENST00000481212 ADCY9O60503 1353 aa8.83□□□□□ -1
SPTA1-205ENST00000481212 ANKRD62A6NC57 917 aa8.82□□□□□ -1
SPTA1-205ENST00000481212 KCNH1O95259 989 aa8.82□□□□□ -1
SPTA1-205ENST00000481212 PRAMEF1O95521 474 aa8.82□□□□□ -1
SPTA1-205ENST00000481212 GYS1P13807 737 aa8.82□□□□□ -1
SPTA1-205ENST00000481212 CHRNA5P30532 468 aa8.82□□□□□ -1
SPTA1-205ENST00000481212 TGFB2P61812 414 aa8.82□□□□□ -1
SPTA1-205ENST00000481212 TCEA2Q15560 299 aa8.82□□□□□ -1
SPTA1-205ENST00000481212 CPSF6Q16630 551 aaKnown RBP eCLIP8.82□□□□□ -1
SPTA1-205ENST00000481212 CDKAL1Q5VV42 579 aa8.82□□□□□ -1
SPTA1-205ENST00000481212 TRIM59Q8IWR1 403 aa8.82□□□□□ -1
SPTA1-205ENST00000481212 SYNPOQ8N3V7 929 aa8.82□□□□□ -1
SPTA1-205ENST00000481212 DAGLBQ8NCG7 672 aa8.82□□□□□ -1
SPTA1-205ENST00000481212 DHRS4Q9BTZ2 278 aa8.82□□□□□ -1
SPTA1-205ENST00000481212 DUSP15Q9H1R2 295 aaPredicted RBP8.82□□□□□ -1
SPTA1-205ENST00000481212 ARHGEF4Q9NR80 690 aa8.82□□□□□ -1
SPTA1-205ENST00000481212 TUBGCP6Q96RT7 1819 aa8.82□□□□□ -1
SPTA1-205ENST00000481212 MEIS1O00470 390 aa8.81□□□□□ -1
SPTA1-205ENST00000481212 MSTNO14793 375 aa8.81□□□□□ -1
SPTA1-205ENST00000481212 CYP26A1O43174 497 aa8.81□□□□□ -1
SPTA1-205ENST00000481212 PRODHO43272 600 aa8.81□□□□□ -1
SPTA1-205ENST00000481212 VAMP4O75379 141 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms