RNA–Protein interactions for RNA: ENST00000481131.5

UPF3A-207, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 678 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-207ENST00000481131 CHST14Q8NCH0 376 aa7.21□□□□□ -1.26
UPF3A-207ENST00000481131 SMC1BQ8NDV3 1235 aa7.21□□□□□ -1.26
UPF3A-207ENST00000481131 OR2W6PQ8NHA6 318 aa7.21□□□□□ -1.26
UPF3A-207ENST00000481131 PI4K2BQ8TCG2 481 aa7.21□□□□□ -1.26
UPF3A-207ENST00000481131 TRMT2BQ96GJ1 504 aaKnown RBP7.21□□□□□ -1.26
UPF3A-207ENST00000481131 SMURF1Q9HCE7 757 aa7.21□□□□□ -1.26
UPF3A-207ENST00000481131 CRTAC1Q9NQ79 661 aa7.21□□□□□ -1.26
UPF3A-207ENST00000481131 HOMER2Q9NSB8 354 aa7.21□□□□□ -1.26
UPF3A-207ENST00000481131 CATSPERZQ9NTU4 200 aa7.21□□□□□ -1.26
UPF3A-207ENST00000481131 MBNL3Q9NUK0 354 aaKnown RBP7.21□□□□□ -1.26
UPF3A-207ENST00000481131 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.21□□□□□ -1.26
UPF3A-207ENST00000481131 TAF6LQ9Y6J9 622 aa7.21□□□□□ -1.26
UPF3A-207ENST00000481131 ZCCHC6Q5VYS8 1495 aaKnown RBP7.21□□□□□ -1.26
UPF3A-207ENST00000481131 ZNF561-AS1K7EIQ3 104 aa7.2□□□□□ -1.26
UPF3A-207ENST00000481131 GPR39O43194 453 aa7.2□□□□□ -1.26
UPF3A-207ENST00000481131 HPXP02790 462 aa7.2□□□□□ -1.26
UPF3A-207ENST00000481131 COL6A2P12110 1019 aa7.2□□□□□ -1.26
UPF3A-207ENST00000481131 PDE6AP16499 860 aa7.2□□□□□ -1.26
UPF3A-207ENST00000481131 TRHRP34981 398 aaPredicted RBP7.2□□□□□ -1.26
UPF3A-207ENST00000481131 ADCYAP1R1P41586 468 aa7.2□□□□□ -1.26
UPF3A-207ENST00000481131 ST5P78524 1137 aa7.2□□□□□ -1.26
UPF3A-207ENST00000481131 LACTBP83111 547 aaPredicted RBP7.2□□□□□ -1.26
UPF3A-207ENST00000481131 CHRNEQ04844 493 aa7.2□□□□□ -1.26
UPF3A-207ENST00000481131 SLC14A2Q15849 920 aa7.2□□□□□ -1.26
UPF3A-207ENST00000481131 GALNT18Q6P9A2 607 aa7.2□□□□□ -1.26
UPF3A-207ENST00000481131 FERMT3Q86UX7 667 aa7.2□□□□□ -1.26
UPF3A-207ENST00000481131 OSTM1Q86WC4 334 aa7.2□□□□□ -1.26
UPF3A-207ENST00000481131 LZTR1Q8N653 840 aa7.2□□□□□ -1.26
UPF3A-207ENST00000481131 IRF2BPLQ9H1B7 796 aa7.2□□□□□ -1.26
UPF3A-207ENST00000481131 C19orf44Q9H6X5 657 aa7.2□□□□□ -1.26
UPF3A-207ENST00000481131 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.2□□□□□ -1.26
UPF3A-207ENST00000481131 KLHL42Q9P2K6 505 aa7.2□□□□□ -1.26
UPF3A-207ENST00000481131 ANGEL1Q9UNK9 670 aaKnown RBP7.2□□□□□ -1.26
UPF3A-207ENST00000481131 PHLDB1Q86UU1 1377 aa7.2□□□□□ -1.26
UPF3A-207ENST00000481131 NKRFO15226 690 aaKnown RBP eCLIP7.19□□□□□ -1.26
UPF3A-207ENST00000481131 PSPNO60542 156 aa7.19□□□□□ -1.26
UPF3A-207ENST00000481131 ATP2A2P16615 1042 aaKnown RBP7.19□□□□□ -1.26
UPF3A-207ENST00000481131 PRKCAP17252 672 aa7.19□□□□□ -1.26
UPF3A-207ENST00000481131 PMLP29590 882 aa7.19□□□□□ -1.26
UPF3A-207ENST00000481131 SCNN1BP51168 640 aa7.19□□□□□ -1.26
UPF3A-207ENST00000481131 JAM2P57087 298 aa7.19□□□□□ -1.26
UPF3A-207ENST00000481131 NR0B2Q15466 257 aa7.19□□□□□ -1.26
UPF3A-207ENST00000481131 WWC2Q6AWC2 1192 aa7.19□□□□□ -1.26
UPF3A-207ENST00000481131 OTOP1Q7RTM1 612 aa7.19□□□□□ -1.26
UPF3A-207ENST00000481131 OTOP3Q7RTS5 596 aa7.19□□□□□ -1.26
UPF3A-207ENST00000481131 RIOX2Q8IUF8 465 aa7.19□□□□□ -1.26
UPF3A-207ENST00000481131 NUP43Q8NFH3 380 aa7.19□□□□□ -1.26
UPF3A-207ENST00000481131 PIP4K2CQ8TBX8 421 aa7.19□□□□□ -1.26
UPF3A-207ENST00000481131 WDR66Q8TBY9 1149 aa7.19□□□□□ -1.26
UPF3A-207ENST00000481131 SH3RF2Q8TEC5 729 aa7.19□□□□□ -1.26
UPF3A-207ENST00000481131 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.19□□□□□ -1.26
UPF3A-207ENST00000481131 USP7Q93009 1102 aa7.19□□□□□ -1.26
UPF3A-207ENST00000481131 SHISA4Q96DD7 197 aa7.19□□□□□ -1.26
UPF3A-207ENST00000481131 TTC1Q99614 292 aa7.19□□□□□ -1.26
UPF3A-207ENST00000481131 IFT22Q9H7X7 185 aa7.19□□□□□ -1.26
UPF3A-207ENST00000481131 PDLIM7Q9NR12 457 aa7.19□□□□□ -1.26
UPF3A-207ENST00000481131 PTPDC1A2A3K4 754 aa7.18□□□□□ -1.26
UPF3A-207ENST00000481131 FITM1A5D6W6 292 aa7.18□□□□□ -1.26
UPF3A-207ENST00000481131 GSTA4O15217 222 aa7.18□□□□□ -1.26
UPF3A-207ENST00000481131 BRINP1O60477 761 aa7.18□□□□□ -1.26
UPF3A-207ENST00000481131 RNASE1P07998 156 aaKnown RBP7.18□□□□□ -1.26
UPF3A-207ENST00000481131 GNAT1P11488 350 aa7.18□□□□□ -1.26
UPF3A-207ENST00000481131 TAL1P17542 331 aaPredicted RBP7.18□□□□□ -1.26
UPF3A-207ENST00000481131 GDNFP39905 211 aa7.18□□□□□ -1.26
UPF3A-207ENST00000481131 IRAK1P51617 712 aa7.18□□□□□ -1.26
UPF3A-207ENST00000481131 PLCL1Q15111 1095 aa7.18□□□□□ -1.26
UPF3A-207ENST00000481131 CRY1Q16526 586 aa7.18□□□□□ -1.26
UPF3A-207ENST00000481131 NLRX1Q86UT6 975 aa7.18□□□□□ -1.26
UPF3A-207ENST00000481131 SPPL2CQ8IUH8 684 aa7.18□□□□□ -1.26
UPF3A-207ENST00000481131 CHTF18Q8WVB6 975 aa7.18□□□□□ -1.26
UPF3A-207ENST00000481131 EPB41L1Q9H4G0 881 aa7.18□□□□□ -1.26
UPF3A-207ENST00000481131 CABP5Q9NP86 173 aa7.18□□□□□ -1.26
UPF3A-207ENST00000481131 THG1LQ9NWX6 298 aaKnown RBP7.18□□□□□ -1.26
UPF3A-207ENST00000481131 H2AFY2Q9P0M6 372 aaPredicted RBP7.18□□□□□ -1.26
UPF3A-207ENST00000481131 WASHC2CQ9Y4E1 1318 aa7.18□□□□□ -1.26
UPF3A-207ENST00000481131 RB1CC1Q8TDY2 1594 aa7.17□□□□□ -1.26
UPF3A-207ENST00000481131 ALG1L2C9J202 215 aa7.17□□□□□ -1.26
UPF3A-207ENST00000481131 KCNK3O14649 394 aa7.17□□□□□ -1.26
UPF3A-207ENST00000481131 KATNA1O75449 491 aa7.17□□□□□ -1.26
UPF3A-207ENST00000481131 FKBP9O95302 570 aa7.17□□□□□ -1.26
UPF3A-207ENST00000481131 NTRK1P04629 796 aa7.17□□□□□ -1.26
UPF3A-207ENST00000481131 GLI4P10075 376 aa7.17□□□□□ -1.26
UPF3A-207ENST00000481131 CPEP16870 476 aa7.17□□□□□ -1.26
UPF3A-207ENST00000481131 KRT15P19012 456 aa7.17□□□□□ -1.26
UPF3A-207ENST00000481131 GALK1P51570 392 aa7.17□□□□□ -1.26
UPF3A-207ENST00000481131 GUCY2FP51841 1108 aa7.17□□□□□ -1.26
UPF3A-207ENST00000481131 GPR19Q15760 415 aa7.17□□□□□ -1.26
UPF3A-207ENST00000481131 MROH9Q5TGP6 573 aa7.17□□□□□ -1.26
UPF3A-207ENST00000481131 ARHGAP36Q6ZRI8 547 aa7.17□□□□□ -1.26
UPF3A-207ENST00000481131 FKBP9P1Q75LS8 142 aa7.17□□□□□ -1.26
UPF3A-207ENST00000481131 PTRH1Q86Y79 214 aaKnown RBP7.17□□□□□ -1.26
UPF3A-207ENST00000481131 OXR1Q8N573 874 aa7.17□□□□□ -1.26
UPF3A-207ENST00000481131 C2orf69Q8N8R5 385 aa7.17□□□□□ -1.26
UPF3A-207ENST00000481131 COG1Q8WTW3 980 aa7.17□□□□□ -1.26
UPF3A-207ENST00000481131 GPR101Q96P66 508 aaPredicted RBP7.17□□□□□ -1.26
UPF3A-207ENST00000481131 TRIM8Q9BZR9 551 aa7.17□□□□□ -1.26
UPF3A-207ENST00000481131 CTNND2Q9UQB3 1225 aa7.17□□□□□ -1.26
UPF3A-207ENST00000481131 COA3Q9Y2R0 106 aaPredicted RBP7.17□□□□□ -1.26
UPF3A-207ENST00000481131 MAN2B1O00754 1011 aa7.16□□□□□ -1.26
UPF3A-207ENST00000481131 PAX4O43316 350 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms