RNA–Protein interactions for RNA: ENST00000481002.5

SHROOM3-205, Transcript of shroom family member 3, humanhuman

TSL 4

Gene SHROOM3, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-205ENST00000481002 TRAPPC10P48553 1259 aa14.07□□□□□ -0.16
SHROOM3-205ENST00000481002 SP2Q02086 613 aa14.07□□□□□ -0.16
SHROOM3-205ENST00000481002 TNFAIP2Q03169 654 aa14.07□□□□□ -0.16
SHROOM3-205ENST00000481002 Q4G0T1 1027 aa14.07□□□□□ -0.16
SHROOM3-205ENST00000481002 LHX8Q68G74 356 aa14.07□□□□□ -0.16
SHROOM3-205ENST00000481002 BRAPQ7Z569 592 aa14.07□□□□□ -0.16
SHROOM3-205ENST00000481002 PLA2G4DQ86XP0 818 aa14.07□□□□□ -0.16
SHROOM3-205ENST00000481002 CDHR1Q96JP9 859 aa14.07□□□□□ -0.16
SHROOM3-205ENST00000481002 NAP1L4Q99733 375 aaKnown RBP14.07□□□□□ -0.16
SHROOM3-205ENST00000481002 SENP7Q9BQF6 1050 aa14.07□□□□□ -0.16
SHROOM3-205ENST00000481002 RNF208Q9H0X6 261 aa14.07□□□□□ -0.16
SHROOM3-205ENST00000481002 KCNH7Q9NS40 1196 aa14.07□□□□□ -0.16
SHROOM3-205ENST00000481002 DDX20Q9UHI6 824 aaKnown RBP14.07□□□□□ -0.16
SHROOM3-205ENST00000481002 GNEQ9Y223 722 aaKnown RBP14.07□□□□□ -0.16
SHROOM3-205ENST00000481002 Q9Y3F1 56 aa14.07□□□□□ -0.16
SHROOM3-205ENST00000481002 MYH15Q9Y2K3 1946 aa14.06□□□□□ -0.16
SHROOM3-205ENST00000481002 TDP2O95551 362 aa14.06□□□□□ -0.16
SHROOM3-205ENST00000481002 GJB1P08034 283 aa14.06□□□□□ -0.16
SHROOM3-205ENST00000481002 ARP10275 920 aa14.06□□□□□ -0.16
SHROOM3-205ENST00000481002 DDIT3P35638 169 aa14.06□□□□□ -0.16
SHROOM3-205ENST00000481002 TOB1P50616 345 aaPredicted RBP14.06□□□□□ -0.16
SHROOM3-205ENST00000481002 RESTQ13127 1097 aa14.06□□□□□ -0.16
SHROOM3-205ENST00000481002 MTMR1Q13613 665 aa14.06□□□□□ -0.16
SHROOM3-205ENST00000481002 LETM2Q2VYF4 491 aa14.06□□□□□ -0.16
SHROOM3-205ENST00000481002 TMEM63BQ5T3F8 832 aa14.06□□□□□ -0.16
SHROOM3-205ENST00000481002 LENG9Q96B70 501 aa14.06□□□□□ -0.16
SHROOM3-205ENST00000481002 ZSCAN16Q9H4T2 348 aaPredicted RBP14.06□□□□□ -0.16
SHROOM3-205ENST00000481002 DAXXQ9UER7 740 aaPredicted RBP14.06□□□□□ -0.16
SHROOM3-205ENST00000481002 MRVI1Q9Y6F6 885 aa14.06□□□□□ -0.16
SHROOM3-205ENST00000481002 WNT7AO00755 349 aa14.05□□□□□ -0.16
SHROOM3-205ENST00000481002 CCNT1O60563 726 aaKnown RBP14.05□□□□□ -0.16
SHROOM3-205ENST00000481002 ATP9AO75110 1047 aa14.05□□□□□ -0.16
SHROOM3-205ENST00000481002 MYCP01106 439 aaPredicted RBP14.05□□□□□ -0.16
SHROOM3-205ENST00000481002 ZSCAN22P10073 491 aaPredicted RBP14.05□□□□□ -0.16
SHROOM3-205ENST00000481002 RARBP10826 455 aa14.05□□□□□ -0.16
SHROOM3-205ENST00000481002 NKX3-2P78367 333 aa14.05□□□□□ -0.16
SHROOM3-205ENST00000481002 SETQ01105 290 aaPredicted RBP14.05□□□□□ -0.16
SHROOM3-205ENST00000481002 ORC2Q13416 577 aaPredicted RBP14.05□□□□□ -0.16
SHROOM3-205ENST00000481002 LY6KQ17RY6 165 aa14.05□□□□□ -0.16
SHROOM3-205ENST00000481002 PRR16Q569H4 304 aa14.05□□□□□ -0.16
SHROOM3-205ENST00000481002 RILPL1Q5EBL4 403 aa14.05□□□□□ -0.16
SHROOM3-205ENST00000481002 FERMT3Q86UX7 667 aa14.05□□□□□ -0.16
SHROOM3-205ENST00000481002 AGO4Q9HCK5 861 aaKnown RBP14.05□□□□□ -0.16
SHROOM3-205ENST00000481002 DDX25Q9UHL0 483 aaKnown RBP14.05□□□□□ -0.16
SHROOM3-205ENST00000481002 NOL7Q9UMY1 257 aaKnown RBP14.05□□□□□ -0.16
SHROOM3-205ENST00000481002 WDR81Q562E7 1941 aa14.05□□□□□ -0.16
SHROOM3-205ENST00000481002 POTEFA5A3E0 1075 aa14.04□□□□□ -0.16
SHROOM3-205ENST00000481002 SLC37A4O43826 429 aa14.04□□□□□ -0.16
SHROOM3-205ENST00000481002 KCNA2P16389 499 aa14.04□□□□□ -0.16
SHROOM3-205ENST00000481002 CAPN2P17655 700 aa14.04□□□□□ -0.16
SHROOM3-205ENST00000481002 UBA1P22314 1058 aaKnown RBP14.04□□□□□ -0.16
SHROOM3-205ENST00000481002 GJA9P57773 515 aa14.04□□□□□ -0.16
SHROOM3-205ENST00000481002 PKP1Q13835 747 aa14.04□□□□□ -0.16
SHROOM3-205ENST00000481002 NEDD9Q14511 834 aa14.04□□□□□ -0.16
SHROOM3-205ENST00000481002 CELF3Q5SZQ8 465 aaKnown RBP14.04□□□□□ -0.16
SHROOM3-205ENST00000481002 GJC2Q5T442 439 aaPredicted RBP14.04□□□□□ -0.16
SHROOM3-205ENST00000481002 ANO1Q5XXA6 986 aa14.04□□□□□ -0.16
SHROOM3-205ENST00000481002 GIMAP8Q8ND71 665 aaPredicted RBP14.04□□□□□ -0.16
SHROOM3-205ENST00000481002 COPS5Q92905 334 aa14.04□□□□□ -0.16
SHROOM3-205ENST00000481002 EMID1Q96A84 441 aaPredicted RBP14.04□□□□□ -0.16
SHROOM3-205ENST00000481002 DEFB118Q96PH6 123 aa14.04□□□□□ -0.16
SHROOM3-205ENST00000481002 CRISPLD2Q9H0B8 497 aa14.04□□□□□ -0.16
SHROOM3-205ENST00000481002 UPF3AQ9H1J1 476 aaKnown RBP14.04□□□□□ -0.16
SHROOM3-205ENST00000481002 IPO5O00410 1097 aaKnown RBP14.03□□□□□ -0.16
SHROOM3-205ENST00000481002 TBX3O15119 743 aa14.03□□□□□ -0.16
SHROOM3-205ENST00000481002 MSH4O15457 936 aa14.03□□□□□ -0.16
SHROOM3-205ENST00000481002 DYNC1LI2O43237 492 aaPredicted RBP14.03□□□□□ -0.16
SHROOM3-205ENST00000481002 SGPL1O95470 568 aa14.03□□□□□ -0.16
SHROOM3-205ENST00000481002 BRD1O95696 1058 aa14.03□□□□□ -0.16
SHROOM3-205ENST00000481002 GGPS1O95749 300 aa14.03□□□□□ -0.16
SHROOM3-205ENST00000481002 GH1P01241 217 aa14.03□□□□□ -0.16
SHROOM3-205ENST00000481002 ATP2B1P20020 1258 aa14.03□□□□□ -0.16
SHROOM3-205ENST00000481002 ARHGAP1Q07960 439 aa14.03□□□□□ -0.16
SHROOM3-205ENST00000481002 LAMC2Q13753 1193 aa14.03□□□□□ -0.16
SHROOM3-205ENST00000481002 TTC38Q5R3I4 469 aa14.03□□□□□ -0.16
SHROOM3-205ENST00000481002 MYSM1Q5VVJ2 828 aa14.03□□□□□ -0.16
SHROOM3-205ENST00000481002 DHX37Q8IY37 1157 aaKnown RBP14.03□□□□□ -0.16
SHROOM3-205ENST00000481002 ETNPPLQ8TBG4 499 aa14.03□□□□□ -0.16
SHROOM3-205ENST00000481002 SLC5A5Q92911 643 aa14.03□□□□□ -0.16
SHROOM3-205ENST00000481002 LENG1Q96BZ8 264 aaPredicted RBP14.03□□□□□ -0.16
SHROOM3-205ENST00000481002 ABHD8Q96I13 439 aa14.03□□□□□ -0.16
SHROOM3-205ENST00000481002 ZNF577Q9BSK1 485 aa14.03□□□□□ -0.16
SHROOM3-205ENST00000481002 TMEM106CQ9BVX2 250 aa14.03□□□□□ -0.16
SHROOM3-205ENST00000481002 BCAS3Q9H6U6 928 aa14.03□□□□□ -0.16
SHROOM3-205ENST00000481002 KCNMB3Q9NPA1 279 aa14.03□□□□□ -0.16
SHROOM3-205ENST00000481002 XPNPEP3Q9NQH7 507 aa14.03□□□□□ -0.16
SHROOM3-205ENST00000481002 OGDHLQ9ULD0 1010 aa14.03□□□□□ -0.16
SHROOM3-205ENST00000481002 ZDHHC9Q9Y397 364 aa14.03□□□□□ -0.16
SHROOM3-205ENST00000481002 NFASCO94856 1347 aa14.03□□□□□ -0.16
SHROOM3-205ENST00000481002 TCHHQ07283 1943 aa14.03□□□□□ -0.16
SHROOM3-205ENST00000481002 SYNRGQ9UMZ2 1314 aa14.02□□□□□ -0.17
SHROOM3-205ENST00000481002 CTAGE5O15320 804 aa14.02□□□□□ -0.17
SHROOM3-205ENST00000481002 DHX15O43143 795 aaKnown RBP14.02□□□□□ -0.17
SHROOM3-205ENST00000481002 ADAMTS4O75173 837 aa14.02□□□□□ -0.17
SHROOM3-205ENST00000481002 FARP2O94887 1054 aaPredicted RBP14.02□□□□□ -0.17
SHROOM3-205ENST00000481002 F13A1P00488 732 aa14.02□□□□□ -0.17
SHROOM3-205ENST00000481002 PTGS1P23219 599 aa14.02□□□□□ -0.17
SHROOM3-205ENST00000481002 MCM7P33993 719 aa14.02□□□□□ -0.17
SHROOM3-205ENST00000481002 GJA8P48165 433 aa14.02□□□□□ -0.17
SHROOM3-205ENST00000481002 ITGB3BPQ13352 177 aaPredicted RBP14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms