RNA–Protein interactions for RNA: ENST00000480210.1

USP54-212, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 640 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-212ENST00000480210 NFASCO94856 1347 aa9.37□□□□□ -0.91
USP54-212ENST00000480210 BAG4O95429 457 aaKnown RBP9.37□□□□□ -0.91
USP54-212ENST00000480210 GH1P01241 217 aa9.37□□□□□ -0.91
USP54-212ENST00000480210 GJA8P48165 433 aa9.37□□□□□ -0.91
USP54-212ENST00000480210 GJA9P57773 515 aa9.37□□□□□ -0.91
USP54-212ENST00000480210 MTMR1Q13613 665 aa9.37□□□□□ -0.91
USP54-212ENST00000480210 PRAMEF19Q5SWL8 479 aa9.37□□□□□ -0.91
USP54-212ENST00000480210 MCTP1Q6DN14 999 aa9.37□□□□□ -0.91
USP54-212ENST00000480210 CCDC62Q6P9F0 684 aa9.37□□□□□ -0.91
USP54-212ENST00000480210 SEPT14Q6ZU15 432 aa9.37□□□□□ -0.91
USP54-212ENST00000480210 EEPD1Q7L9B9 569 aa9.37□□□□□ -0.91
USP54-212ENST00000480210 RNF180Q86T96 592 aa9.37□□□□□ -0.91
USP54-212ENST00000480210 PLA2G4DQ86XP0 818 aa9.37□□□□□ -0.91
USP54-212ENST00000480210 FBXO16Q8IX29 292 aaPredicted RBP9.37□□□□□ -0.91
USP54-212ENST00000480210 TNS4Q8IZW8 715 aa9.37□□□□□ -0.91
USP54-212ENST00000480210 PCSK9Q8NBP7 692 aaKnown RBP9.37□□□□□ -0.91
USP54-212ENST00000480210 TRPV1Q8NER1 839 aa9.37□□□□□ -0.91
USP54-212ENST00000480210 RASGRP4Q8TDF6 673 aa9.37□□□□□ -0.91
USP54-212ENST00000480210 EMID1Q96A84 441 aaPredicted RBP9.37□□□□□ -0.91
USP54-212ENST00000480210 FAM20AQ96MK3 541 aa9.37□□□□□ -0.91
USP54-212ENST00000480210 MBOAT7Q96N66 472 aa9.37□□□□□ -0.91
USP54-212ENST00000480210 TSEN34Q9BSV6 310 aaKnown RBP9.37□□□□□ -0.91
USP54-212ENST00000480210 UNC93B1Q9H1C4 597 aa9.37□□□□□ -0.91
USP54-212ENST00000480210 UPF3AQ9H1J1 476 aaKnown RBP9.37□□□□□ -0.91
USP54-212ENST00000480210 TBC1D22BQ9NU19 505 aa9.37□□□□□ -0.91
USP54-212ENST00000480210 RTEL1Q9NZ71 1219 aa9.37□□□□□ -0.91
USP54-212ENST00000480210 TCEAL9Q9UHQ7 104 aa9.37□□□□□ -0.91
USP54-212ENST00000480210 OGDHLQ9ULD0 1010 aa9.37□□□□□ -0.91
USP54-212ENST00000480210 GNEQ9Y223 722 aaKnown RBP9.37□□□□□ -0.91
USP54-212ENST00000480210 MYH15Q9Y2K3 1946 aa9.37□□□□□ -0.91
USP54-212ENST00000480210 LAD1O00515 517 aa9.36□□□□□ -0.91
USP54-212ENST00000480210 BMP15O95972 392 aa9.36□□□□□ -0.91
USP54-212ENST00000480210 ITGB5P18084 799 aa9.36□□□□□ -0.91
USP54-212ENST00000480210 CST5P28325 142 aaPredicted RBP9.36□□□□□ -0.91
USP54-212ENST00000480210 CCND3P30281 292 aaPredicted RBP9.36□□□□□ -0.91
USP54-212ENST00000480210 ADCYAP1R1P41586 468 aa9.36□□□□□ -0.91
USP54-212ENST00000480210 CPT1AP50416 773 aa9.36□□□□□ -0.91
USP54-212ENST00000480210 NUCB2P80303 420 aa9.36□□□□□ -0.91
USP54-212ENST00000480210 GUCY1B3Q02153 619 aa9.36□□□□□ -0.91
USP54-212ENST00000480210 TRIM32Q13049 653 aa9.36□□□□□ -0.91
USP54-212ENST00000480210 NR5A1Q13285 461 aa9.36□□□□□ -0.91
USP54-212ENST00000480210 MTFR1Q15390 333 aa9.36□□□□□ -0.91
USP54-212ENST00000480210 INF2Q27J81 1249 aa9.36□□□□□ -0.91
USP54-212ENST00000480210 LETM2Q2VYF4 491 aa9.36□□□□□ -0.91
USP54-212ENST00000480210 LHX8Q68G74 356 aa9.36□□□□□ -0.91
USP54-212ENST00000480210 ATL3Q6DD88 541 aa9.36□□□□□ -0.91
USP54-212ENST00000480210 DHX37Q8IY37 1157 aaKnown RBP9.36□□□□□ -0.91
USP54-212ENST00000480210 SLFN12Q8IYM2 578 aa9.36□□□□□ -0.91
USP54-212ENST00000480210 IL31RAQ8NI17 732 aa9.36□□□□□ -0.91
USP54-212ENST00000480210 OXER1Q8TDS5 423 aa9.36□□□□□ -0.91
USP54-212ENST00000480210 ABHD8Q96I13 439 aa9.36□□□□□ -0.91
USP54-212ENST00000480210 PGBD1Q96JS3 809 aa9.36□□□□□ -0.91
USP54-212ENST00000480210 RIT2Q99578 217 aa9.36□□□□□ -0.91
USP54-212ENST00000480210 SDF4Q9BRK5 362 aa9.36□□□□□ -0.91
USP54-212ENST00000480210 CRISPLD2Q9H0B8 497 aa9.36□□□□□ -0.91
USP54-212ENST00000480210 MLXIPQ9HAP2 919 aa9.36□□□□□ -0.91
USP54-212ENST00000480210 KCNH7Q9NS40 1196 aa9.36□□□□□ -0.91
USP54-212ENST00000480210 GJB4Q9NTQ9 266 aa9.36□□□□□ -0.91
USP54-212ENST00000480210 CEP131Q9UPN4 1083 aa9.36□□□□□ -0.91
USP54-212ENST00000480210 ATP6V1DQ9Y5K8 247 aa9.36□□□□□ -0.91
USP54-212ENST00000480210 STK24Q9Y6E0 443 aa9.36□□□□□ -0.91
USP54-212ENST00000480210 TCHHQ07283 1943 aa9.36□□□□□ -0.91
USP54-212ENST00000480210 DOCK5Q9H7D0 1870 aa9.36□□□□□ -0.91
USP54-212ENST00000480210 IGLV3-22A0A075B6J6 115 aa9.35□□□□□ -0.91
USP54-212ENST00000480210 VPS37CA5D8V6 355 aaPredicted RBP9.35□□□□□ -0.91
USP54-212ENST00000480210 MOXD2PA6NHM9 499 aa9.35□□□□□ -0.91
USP54-212ENST00000480210 MARCH6O60337 910 aa9.35□□□□□ -0.91
USP54-212ENST00000480210 CCNT1O60563 726 aaKnown RBP9.35□□□□□ -0.91
USP54-212ENST00000480210 PPFIA4O75335 1185 aa9.35□□□□□ -0.91
USP54-212ENST00000480210 CABYRO75952 493 aa9.35□□□□□ -0.91
USP54-212ENST00000480210 RGS20O76081 388 aa9.35□□□□□ -0.91
USP54-212ENST00000480210 TFRCP02786 760 aaKnown RBP9.35□□□□□ -0.91
USP54-212ENST00000480210 SMPD1P17405 629 aa9.35□□□□□ -0.91
USP54-212ENST00000480210 NCLP19338 710 aaKnown RBP9.35□□□□□ -0.91
USP54-212ENST00000480210 FOSBP53539 338 aa9.35□□□□□ -0.91
USP54-212ENST00000480210 PRR16Q569H4 304 aa9.35□□□□□ -0.91
USP54-212ENST00000480210 CELF3Q5SZQ8 465 aaKnown RBP9.35□□□□□ -0.91
USP54-212ENST00000480210 METTL7BQ6UX53 244 aa9.35□□□□□ -0.91
USP54-212ENST00000480210 TLK2Q86UE8 772 aa9.35□□□□□ -0.91
USP54-212ENST00000480210 RDM1Q8NG50 284 aa9.35□□□□□ -0.91
USP54-212ENST00000480210 OR6J1Q8NGC5 347 aa9.35□□□□□ -0.91
USP54-212ENST00000480210 U2AF1L4Q8WU68 220 aaKnown RBP9.35□□□□□ -0.91
USP54-212ENST00000480210 TNPO1Q92973 898 aaKnown RBP9.35□□□□□ -0.91
USP54-212ENST00000480210 DEFB118Q96PH6 123 aa9.35□□□□□ -0.91
USP54-212ENST00000480210 XPNPEP3Q9NQH7 507 aa9.35□□□□□ -0.91
USP54-212ENST00000480210 PDGFCQ9NRA1 345 aa9.35□□□□□ -0.91
USP54-212ENST00000480210 POLR3EQ9NVU0 708 aa9.35□□□□□ -0.91
USP54-212ENST00000480210 DDX25Q9UHL0 483 aaKnown RBP9.35□□□□□ -0.91
USP54-212ENST00000480210 A6NJR5 290 aa9.34□□□□□ -0.91
USP54-212ENST00000480210 KBTBD13C9JR72 458 aa9.34□□□□□ -0.91
USP54-212ENST00000480210 FAM86B1E9PN63 330 aa9.34□□□□□ -0.91
USP54-212ENST00000480210 IPO5O00410 1097 aaKnown RBP9.34□□□□□ -0.91
USP54-212ENST00000480210 DNM1LO00429 736 aa9.34□□□□□ -0.91
USP54-212ENST00000480210 DYNC1LI2O43237 492 aaPredicted RBP9.34□□□□□ -0.91
USP54-212ENST00000480210 FAM86B2P0C5J1 330 aa9.34□□□□□ -0.91
USP54-212ENST00000480210 KCNA2P16389 499 aa9.34□□□□□ -0.91
USP54-212ENST00000480210 SFNP31947 248 aa9.34□□□□□ -0.91
USP54-212ENST00000480210 KRT76Q01546 638 aa9.34□□□□□ -0.91
USP54-212ENST00000480210 DGKDQ16760 1214 aa9.34□□□□□ -0.91
USP54-212ENST00000480210 LY6KQ17RY6 165 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms