RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 FAM43AQ8N2R8 423 aa12.34□□□□□ -0.43
VTI1A-204ENST00000480057 GIMAP8Q8ND71 665 aaPredicted RBP12.34□□□□□ -0.43
VTI1A-204ENST00000480057 LRRC15Q8TF66 581 aa12.34□□□□□ -0.43
VTI1A-204ENST00000480057 TUFT1Q9NNX1 390 aa12.34□□□□□ -0.43
VTI1A-204ENST00000480057 RNF146Q9NTX7 359 aa12.34□□□□□ -0.43
VTI1A-204ENST00000480057 IMPACTQ9P2X3 320 aa12.34□□□□□ -0.43
VTI1A-204ENST00000480057 KCNH4Q9UQ05 1017 aa12.34□□□□□ -0.43
VTI1A-204ENST00000480057 SYNRGQ9UMZ2 1314 aa12.34□□□□□ -0.43
VTI1A-204ENST00000480057 SPDYE16A6NNV3 312 aaPredicted RBP12.33□□□□□ -0.44
VTI1A-204ENST00000480057 ESPNB1AK53 854 aa12.33□□□□□ -0.44
VTI1A-204ENST00000480057 IRF6O14896 467 aa12.33□□□□□ -0.44
VTI1A-204ENST00000480057 PSMD10O75832 226 aa12.33□□□□□ -0.44
VTI1A-204ENST00000480057 CASP1P29466 404 aa12.33□□□□□ -0.44
VTI1A-204ENST00000480057 RPS6P62753 249 aaKnown RBP12.33□□□□□ -0.44
VTI1A-204ENST00000480057 FANCCQ00597 558 aa12.33□□□□□ -0.44
VTI1A-204ENST00000480057 FMR1Q06787 632 aaKnown RBP eCLIP12.33□□□□□ -0.44
VTI1A-204ENST00000480057 PSMD2Q13200 908 aa12.33□□□□□ -0.44
VTI1A-204ENST00000480057 MUM1L1Q5H9M0 696 aa12.33□□□□□ -0.44
VTI1A-204ENST00000480057 FOXR2Q6PJQ5 311 aa12.33□□□□□ -0.44
VTI1A-204ENST00000480057 CHST13Q8NET6 341 aa12.33□□□□□ -0.44
VTI1A-204ENST00000480057 NEK9Q8TD19 979 aa12.33□□□□□ -0.44
VTI1A-204ENST00000480057 STAMQ92783 540 aa12.33□□□□□ -0.44
VTI1A-204ENST00000480057 DHTKD1Q96HY7 919 aaPredicted RBP12.33□□□□□ -0.44
VTI1A-204ENST00000480057 NUDT12Q9BQG2 462 aa12.33□□□□□ -0.44
VTI1A-204ENST00000480057 JADE2Q9NQC1 790 aa12.33□□□□□ -0.44
VTI1A-204ENST00000480057 BMP2KQ9NSY1 1161 aaPredicted RBP12.33□□□□□ -0.44
VTI1A-204ENST00000480057 EXOC1Q9NV70 894 aa12.33□□□□□ -0.44
VTI1A-204ENST00000480057 COL20A1Q9P218 1284 aa12.33□□□□□ -0.44
VTI1A-204ENST00000480057 FZD1Q9UP38 647 aa12.33□□□□□ -0.44
VTI1A-204ENST00000480057 ZKSCAN5Q9Y2L8 839 aa12.33□□□□□ -0.44
VTI1A-204ENST00000480057 NFE2L3Q9Y4A8 694 aa12.33□□□□□ -0.44
VTI1A-204ENST00000480057 UBIAD1Q9Y5Z9 338 aa12.33□□□□□ -0.44
VTI1A-204ENST00000480057 COL11A1P12107 1806 aaPredicted RBP12.32□□□□□ -0.44
VTI1A-204ENST00000480057 POTECB2RU33 542 aa12.32□□□□□ -0.44
VTI1A-204ENST00000480057 PSMA7O14818 248 aa12.32□□□□□ -0.44
VTI1A-204ENST00000480057 MAFGO15525 162 aa12.32□□□□□ -0.44
VTI1A-204ENST00000480057 STAM2O75886 525 aa12.32□□□□□ -0.44
VTI1A-204ENST00000480057 CD44P16070 742 aaKnown RBP12.32□□□□□ -0.44
VTI1A-204ENST00000480057 COPB2P35606 906 aa12.32□□□□□ -0.44
VTI1A-204ENST00000480057 FKBP1BP68106 108 aa12.32□□□□□ -0.44
VTI1A-204ENST00000480057 ASIC1P78348 528 aa12.32□□□□□ -0.44
VTI1A-204ENST00000480057 SPAG1Q07617 926 aa12.32□□□□□ -0.44
VTI1A-204ENST00000480057 PAK1Q13153 545 aa12.32□□□□□ -0.44
VTI1A-204ENST00000480057 PABPC4Q13310 644 aaKnown RBP eCLIP12.32□□□□□ -0.444e-7■■■□□ 17.1
VTI1A-204ENST00000480057 PRKG1Q13976 671 aa12.32□□□□□ -0.44
VTI1A-204ENST00000480057 MCM6Q14566 821 aa12.32□□□□□ -0.44
VTI1A-204ENST00000480057 TMEM132BQ14DG7 1078 aa12.32□□□□□ -0.44
VTI1A-204ENST00000480057 LDLRAD1Q5T700 205 aa12.32□□□□□ -0.44
VTI1A-204ENST00000480057 LRCH2Q5VUJ6 765 aa12.32□□□□□ -0.44
VTI1A-204ENST00000480057 SNRNP48Q6IEG0 339 aaKnown RBP12.32□□□□□ -0.44
VTI1A-204ENST00000480057 B3GNT9Q6UX72 402 aa12.32□□□□□ -0.44
VTI1A-204ENST00000480057 FASTKD5Q7L8L6 764 aaKnown RBP12.32□□□□□ -0.44
VTI1A-204ENST00000480057 OTOP1Q7RTM1 612 aa12.32□□□□□ -0.44
VTI1A-204ENST00000480057 ADSSL1Q8N142 457 aa12.32□□□□□ -0.44
VTI1A-204ENST00000480057 NOC3LQ8WTT2 800 aaKnown RBP12.32□□□□□ -0.44
VTI1A-204ENST00000480057 PLIN2Q99541 437 aa12.32□□□□□ -0.44
VTI1A-204ENST00000480057 ZNF577Q9BSK1 485 aa12.32□□□□□ -0.44
VTI1A-204ENST00000480057 TEKT3Q9BXF9 490 aa12.32□□□□□ -0.44
VTI1A-204ENST00000480057 ACAD9Q9H845 621 aa12.32□□□□□ -0.44
VTI1A-204ENST00000480057 FANCLQ9NW38 375 aa12.32□□□□□ -0.44
VTI1A-204ENST00000480057 FBXO40Q9UH90 709 aa12.32□□□□□ -0.44
VTI1A-204ENST00000480057 GOLGB1Q14789 3259 aaKnown RBP12.31□□□□□ -0.44
VTI1A-204ENST00000480057 BICDL2A1A5D9 508 aa12.31□□□□□ -0.44
VTI1A-204ENST00000480057 MYMKA6NI61 221 aa12.31□□□□□ -0.44
VTI1A-204ENST00000480057 GAS7O60861 476 aa12.31□□□□□ -0.44
VTI1A-204ENST00000480057 MED24O75448 989 aa12.31□□□□□ -0.44
VTI1A-204ENST00000480057 CAPN15O75808 1086 aa12.31□□□□□ -0.44
VTI1A-204ENST00000480057 STAT3P40763 770 aa12.31□□□□□ -0.44
VTI1A-204ENST00000480057 GSDMDP57764 484 aa12.31□□□□□ -0.44
VTI1A-204ENST00000480057 PDE4DQ08499 809 aa12.31□□□□□ -0.44
VTI1A-204ENST00000480057 PGM5Q15124 567 aa12.31□□□□□ -0.44
VTI1A-204ENST00000480057 EPHA7Q15375 998 aa12.31□□□□□ -0.44
VTI1A-204ENST00000480057 ECM1Q16610 540 aa12.31□□□□□ -0.44
VTI1A-204ENST00000480057 CDKAL1Q5VV42 579 aa12.31□□□□□ -0.44
VTI1A-204ENST00000480057 NCAPH2Q6IBW4 605 aa12.31□□□□□ -0.44
VTI1A-204ENST00000480057 SLC30A10Q6XR72 485 aa12.31□□□□□ -0.44
VTI1A-204ENST00000480057 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.31□□□□□ -0.44
VTI1A-204ENST00000480057 CATSPER3Q86XQ3 398 aa12.31□□□□□ -0.44
VTI1A-204ENST00000480057 DRC7Q8IY82 874 aa12.31□□□□□ -0.44
VTI1A-204ENST00000480057 CYP2W1Q8TAV3 490 aa12.31□□□□□ -0.44
VTI1A-204ENST00000480057 MED15Q96RN5 788 aa12.31□□□□□ -0.44
VTI1A-204ENST00000480057 CTAGE1Q96RT6 745 aa12.31□□□□□ -0.44
VTI1A-204ENST00000480057 PDCD2LQ9BRP1 358 aa12.31□□□□□ -0.44
VTI1A-204ENST00000480057 ELP3Q9H9T3 547 aa12.31□□□□□ -0.44
VTI1A-204ENST00000480057 PXMP2Q9NR77 195 aa12.31□□□□□ -0.44
VTI1A-204ENST00000480057 AGTPBP1Q9UPW5 1226 aa12.31□□□□□ -0.44
VTI1A-204ENST00000480057 KIAA1024Q9UPX6 916 aa12.31□□□□□ -0.44
VTI1A-204ENST00000480057 DNM3Q9UQ16 869 aa12.31□□□□□ -0.44
VTI1A-204ENST00000480057 SERPINC1P01008 464 aa12.3□□□□□ -0.44
VTI1A-204ENST00000480057 PLA2G4BP0C869 781 aa12.3□□□□□ -0.44
VTI1A-204ENST00000480057 SPATA31C1P0DKV0 1188 aa12.3□□□□□ -0.44
VTI1A-204ENST00000480057 ITGB5P18084 799 aa12.3□□□□□ -0.44
VTI1A-204ENST00000480057 MSNP26038 577 aaKnown RBP12.3□□□□□ -0.44
VTI1A-204ENST00000480057 PRCPP42785 496 aa12.3□□□□□ -0.44
VTI1A-204ENST00000480057 UBASH3AP57075 661 aa12.3□□□□□ -0.44
VTI1A-204ENST00000480057 EHHADHQ08426 723 aa12.3□□□□□ -0.44
VTI1A-204ENST00000480057 TTLL12Q14166 644 aaPredicted RBP12.3□□□□□ -0.44
VTI1A-204ENST00000480057 EAPPQ56P03 285 aaPredicted RBP12.3□□□□□ -0.44
VTI1A-204ENST00000480057 ARHGEF16Q5VV41 709 aa12.3□□□□□ -0.44
VTI1A-204ENST00000480057 KCNK18Q7Z418 384 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms