RNA–Protein interactions for RNA: ENST00000479899.5

CCDC58-205, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3 BASIC

Gene CCDC58, Length 545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-205ENST00000479899 PTPRSQ13332 1948 aa12.68□□□□□ -0.38
CCDC58-205ENST00000479899 RAD50Q92878 1312 aa12.67□□□□□ -0.38
CCDC58-205ENST00000479899 ERC2O15083 957 aa12.67□□□□□ -0.38
CCDC58-205ENST00000479899 FUT2Q10981 343 aa12.67□□□□□ -0.38
CCDC58-205ENST00000479899 NBPF20Q3BBV1 942 aa12.67□□□□□ -0.38
CCDC58-205ENST00000479899 BRDTQ58F21 947 aaPredicted RBP12.67□□□□□ -0.38
CCDC58-205ENST00000479899 ZMYM1Q5SVZ6 1142 aa12.67□□□□□ -0.38
CCDC58-205ENST00000479899 RETREG2Q8NC44 543 aa12.67□□□□□ -0.38
CCDC58-205ENST00000479899 MORC4Q8TE76 937 aa12.67□□□□□ -0.38
CCDC58-205ENST00000479899 DCAF4Q8WV16 495 aa12.67□□□□□ -0.38
CCDC58-205ENST00000479899 DCTPP1Q9H773 170 aa12.67□□□□□ -0.38
CCDC58-205ENST00000479899 IL21Q9HBE4 155 aa12.67□□□□□ -0.38
CCDC58-205ENST00000479899 TTC41PQ6P2S7 1318 aa12.66□□□□□ -0.38
CCDC58-205ENST00000479899 RBAK-RBAKDNI3L0D1 243 aa12.66□□□□□ -0.38
CCDC58-205ENST00000479899 FOXP2O15409 715 aa12.66□□□□□ -0.38
CCDC58-205ENST00000479899 KCNJ6P48051 423 aa12.66□□□□□ -0.38
CCDC58-205ENST00000479899 USP46P62068 366 aa12.66□□□□□ -0.38
CCDC58-205ENST00000479899 TAP1Q03518 808 aa12.66□□□□□ -0.38
CCDC58-205ENST00000479899 VPS53Q5VIR6 699 aa12.66□□□□□ -0.38
CCDC58-205ENST00000479899 RNF207Q6ZRF8 634 aa12.66□□□□□ -0.38
CCDC58-205ENST00000479899 SPRED2Q7Z698 418 aa12.66□□□□□ -0.38
CCDC58-205ENST00000479899 TMCO2Q7Z6W1 182 aaPredicted RBP12.66□□□□□ -0.38
CCDC58-205ENST00000479899 HERC6Q8IVU3 1022 aa12.66□□□□□ -0.38
CCDC58-205ENST00000479899 PI4K2BQ8TCG2 481 aa12.66□□□□□ -0.38
CCDC58-205ENST00000479899 C1QTNF1Q9BXJ1 281 aa12.66□□□□□ -0.38
CCDC58-205ENST00000479899 PLA2G2EQ9NZK7 142 aa12.66□□□□□ -0.38
CCDC58-205ENST00000479899 SCN10AQ9Y5Y9 1956 aa12.65□□□□□ -0.38
CCDC58-205ENST00000479899 KIF28PB7ZC32 967 aa12.65□□□□□ -0.38
CCDC58-205ENST00000479899 IQCF3P0C7M6 154 aa12.65□□□□□ -0.38
CCDC58-205ENST00000479899 RFC2P35250 354 aa12.65□□□□□ -0.38
CCDC58-205ENST00000479899 USH1GQ495M9 461 aa12.65□□□□□ -0.38
CCDC58-205ENST00000479899 MPHOSPH6Q99547 160 aaKnown RBP12.65□□□□□ -0.38
CCDC58-205ENST00000479899 EPHX3Q9H6B9 360 aa12.65□□□□□ -0.38
CCDC58-205ENST00000479899 MTUS1Q9ULD2 1270 aa12.65□□□□□ -0.38
CCDC58-205ENST00000479899 LCHNA4D1U4 455 aa12.64□□□□□ -0.39
CCDC58-205ENST00000479899 TLL1O43897 1013 aa12.64□□□□□ -0.39
CCDC58-205ENST00000479899 TXNP10599 105 aaKnown RBP12.64□□□□□ -0.39
CCDC58-205ENST00000479899 RPS6P62753 249 aaKnown RBP12.64□□□□□ -0.39
CCDC58-205ENST00000479899 KCNC4Q03721 635 aa12.64□□□□□ -0.39
CCDC58-205ENST00000479899 GRB10Q13322 594 aa12.64□□□□□ -0.39
CCDC58-205ENST00000479899 BFSP2Q13515 415 aa12.64□□□□□ -0.39
CCDC58-205ENST00000479899 BLOC1S3Q6QNY0 202 aa12.64□□□□□ -0.39
CCDC58-205ENST00000479899 GDPD5Q8WTR4 605 aa12.64□□□□□ -0.39
CCDC58-205ENST00000479899 SCFD2Q8WU76 684 aa12.64□□□□□ -0.39
CCDC58-205ENST00000479899 CLEC4DQ8WXI8 215 aa12.64□□□□□ -0.39
CCDC58-205ENST00000479899 TMEM47Q9BQJ4 181 aa12.64□□□□□ -0.39
CCDC58-205ENST00000479899 RBM47A0AV96 593 aaKnown RBP12.63□□□□□ -0.39
CCDC58-205ENST00000479899 FAM86C2PA6NEL3 165 aa12.63□□□□□ -0.39
CCDC58-205ENST00000479899 NKRFO15226 690 aaKnown RBP eCLIP12.63□□□□□ -0.39
CCDC58-205ENST00000479899 NR1I2O75469 434 aa12.63□□□□□ -0.39
CCDC58-205ENST00000479899 ARIH2O95376 493 aa12.63□□□□□ -0.39
CCDC58-205ENST00000479899 TOP1P11387 765 aaKnown RBP12.63□□□□□ -0.39
CCDC58-205ENST00000479899 MX1P20591 662 aa12.63□□□□□ -0.39
CCDC58-205ENST00000479899 COPS2P61201 443 aa12.63□□□□□ -0.39
CCDC58-205ENST00000479899 PTGISQ16647 500 aa12.63□□□□□ -0.39
CCDC58-205ENST00000479899 DIEXFQ68CQ4 756 aaKnown RBP12.63□□□□□ -0.39
CCDC58-205ENST00000479899 NFRKBQ6P4R8 1299 aa12.63□□□□□ -0.39
CCDC58-205ENST00000479899 CHST3Q7LGC8 479 aa12.63□□□□□ -0.39
CCDC58-205ENST00000479899 PHOSPHO2Q8TCD6 241 aa12.63□□□□□ -0.39
CCDC58-205ENST00000479899 HLA-CQ95604 372 aa12.63□□□□□ -0.39
CCDC58-205ENST00000479899 COG5Q9UP83 839 aa12.63□□□□□ -0.39
CCDC58-205ENST00000479899 HCN4Q9Y3Q4 1203 aa12.63□□□□□ -0.39
CCDC58-205ENST00000479899 PRRC2BQ5JSZ5 2229 aaKnown RBP12.63□□□□□ -0.39
CCDC58-205ENST00000479899 ORC4O43929 436 aa12.62□□□□□ -0.39
CCDC58-205ENST00000479899 BAIAP3O94812 1187 aa12.62□□□□□ -0.39
CCDC58-205ENST00000479899 GOLGA8HP0CJ92 632 aa12.62□□□□□ -0.39
CCDC58-205ENST00000479899 PDHBP11177 359 aa12.62□□□□□ -0.39
CCDC58-205ENST00000479899 HAND2P61296 217 aa12.62□□□□□ -0.39
CCDC58-205ENST00000479899 DEFB103AP81534 67 aa12.62□□□□□ -0.39
CCDC58-205ENST00000479899 PUS10Q3MIT2 529 aaKnown RBP12.62□□□□□ -0.39
CCDC58-205ENST00000479899 BTNL9Q6UXG8 535 aa12.62□□□□□ -0.39
CCDC58-205ENST00000479899 SEPT14Q6ZU15 432 aa12.62□□□□□ -0.39
CCDC58-205ENST00000479899 CCDC155Q8N6L0 562 aa12.62□□□□□ -0.39
CCDC58-205ENST00000479899 LRFN3Q9BTN0 628 aa12.62□□□□□ -0.39
CCDC58-205ENST00000479899 CPVLQ9H3G5 476 aa12.62□□□□□ -0.39
CCDC58-205ENST00000479899 ANAPC4Q9UJX5 808 aa12.62□□□□□ -0.39
CCDC58-205ENST00000479899 TET1Q8NFU7 2136 aa12.62□□□□□ -0.39
CCDC58-205ENST00000479899 TRIP12Q14669 1992 aaPredicted RBP12.61□□□□□ -0.39
CCDC58-205ENST00000479899 LOC102724159A0A0B4J2E5 919 aa12.61□□□□□ -0.39
CCDC58-205ENST00000479899 A6NJR5 290 aa12.61□□□□□ -0.39
CCDC58-205ENST00000479899 KPNA6O60684 536 aa12.61□□□□□ -0.39
CCDC58-205ENST00000479899 MMP3P08254 477 aa12.61□□□□□ -0.39
CCDC58-205ENST00000479899 POU3F3P20264 500 aaPredicted RBP12.61□□□□□ -0.39
CCDC58-205ENST00000479899 EDNRBP24530 442 aa12.61□□□□□ -0.39
CCDC58-205ENST00000479899 NOVP48745 357 aa12.61□□□□□ -0.39
CCDC58-205ENST00000479899 WDR5P61964 334 aaKnown RBP12.61□□□□□ -0.39
CCDC58-205ENST00000479899 PTPN11Q06124 597 aaPredicted RBP12.61□□□□□ -0.39
CCDC58-205ENST00000479899 PWP2Q15269 919 aaKnown RBP12.61□□□□□ -0.39
CCDC58-205ENST00000479899 TMEM31Q5JXX7 168 aa12.61□□□□□ -0.39
CCDC58-205ENST00000479899 GDF6Q6KF10 455 aaPredicted RBP12.61□□□□□ -0.39
CCDC58-205ENST00000479899 FAM117BQ6P1L5 589 aa12.61□□□□□ -0.39
CCDC58-205ENST00000479899 LRRC8DQ7L1W4 858 aa12.61□□□□□ -0.39
CCDC58-205ENST00000479899 AFG1LQ8WV93 481 aa12.61□□□□□ -0.39
CCDC58-205ENST00000479899 SPIRE2Q8WWL2 714 aa12.61□□□□□ -0.39
CCDC58-205ENST00000479899 CRBNQ96SW2 442 aa12.61□□□□□ -0.39
CCDC58-205ENST00000479899 SIP14410 1827 aa12.6□□□□□ -0.39
CCDC58-205ENST00000479899 A0A0D9SFI3 127 aa12.6□□□□□ -0.39
CCDC58-205ENST00000479899 B4DLN1 442 aa12.6□□□□□ -0.39
CCDC58-205ENST00000479899 LPXNO60711 386 aa12.6□□□□□ -0.39
CCDC58-205ENST00000479899 MRPL12P52815 198 aaKnown RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms