RNA–Protein interactions for RNA: ENST00000479539.1

SP140-210, Transcript of SP140 nuclear body protein, humanhuman

TSL 5

Gene SP140, Length 550 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-210ENST00000479539 ALPK3Q96L96 1907 aa12.1□□□□□ -0.47
SP140-210ENST00000479539 FRMPD3Q5JV73 1810 aa12.1□□□□□ -0.47
SP140-210ENST00000479539 STXBP3O00186 592 aa12.1□□□□□ -0.47
SP140-210ENST00000479539 PRPF3O43395 683 aaKnown RBP12.1□□□□□ -0.47
SP140-210ENST00000479539 EIF5BO60841 1220 aaKnown RBP12.1□□□□□ -0.47
SP140-210ENST00000479539 PPFIA4O75335 1185 aa12.1□□□□□ -0.47
SP140-210ENST00000479539 UBA1P22314 1058 aaKnown RBP12.1□□□□□ -0.47
SP140-210ENST00000479539 ANAPC15P60006 121 aa12.1□□□□□ -0.47
SP140-210ENST00000479539 SEMA3FQ13275 785 aa12.1□□□□□ -0.47
SP140-210ENST00000479539 NTRK3Q16288 839 aa12.1□□□□□ -0.47
SP140-210ENST00000479539 PKN1Q16512 942 aa12.1□□□□□ -0.47
SP140-210ENST00000479539 UBE2SQ16763 222 aa12.1□□□□□ -0.47
SP140-210ENST00000479539 PFKFB3Q16875 520 aaPredicted RBP12.1□□□□□ -0.47
SP140-210ENST00000479539 NBPF20Q3BBV1 942 aa12.1□□□□□ -0.47
SP140-210ENST00000479539 NFRKBQ6P4R8 1299 aa12.1□□□□□ -0.47
SP140-210ENST00000479539 KAT2BQ92831 832 aa12.1□□□□□ -0.47
SP140-210ENST00000479539 IL17RAQ96F46 866 aa12.1□□□□□ -0.47
SP140-210ENST00000479539 ZNF274Q96GC6 653 aaPredicted RBP12.1□□□□□ -0.47
SP140-210ENST00000479539 UPF3BQ9BZI7 483 aaKnown RBP12.1□□□□□ -0.47
SP140-210ENST00000479539 ALDH8A1Q9H2A2 487 aaPredicted RBP12.1□□□□□ -0.47
SP140-210ENST00000479539 RIC8AQ9NPQ8 531 aa12.1□□□□□ -0.47
SP140-210ENST00000479539 PCDHA6Q9UN73 950 aa12.1□□□□□ -0.47
SP140-210ENST00000479539 PCDHA8Q9Y5H6 950 aa12.1□□□□□ -0.47
SP140-210ENST00000479539 DNAH12Q6ZR08 3092 aa12.1□□□□□ -0.47
SP140-210ENST00000479539 MCM3APO60318 1980 aa12.1□□□□□ -0.47
SP140-210ENST00000479539 SMCO2A6NFE2 343 aa12.09□□□□□ -0.47
SP140-210ENST00000479539 SPDYE3A6NKU9 549 aa12.09□□□□□ -0.47
SP140-210ENST00000479539 FIBPO43427 364 aa12.09□□□□□ -0.47
SP140-210ENST00000479539 B4GALT4O60513 344 aa12.09□□□□□ -0.47
SP140-210ENST00000479539 GGPS1O95749 300 aa12.09□□□□□ -0.47
SP140-210ENST00000479539 SUPT20HL2P0C7V6 817 aa12.09□□□□□ -0.47
SP140-210ENST00000479539 SCG2P13521 617 aa12.09□□□□□ -0.47
SP140-210ENST00000479539 IFNAR1P17181 557 aa12.09□□□□□ -0.47
SP140-210ENST00000479539 VASPP50552 380 aaPredicted RBP12.09□□□□□ -0.47
SP140-210ENST00000479539 NAPAP54920 295 aa12.09□□□□□ -0.47
SP140-210ENST00000479539 PTPN11Q06124 597 aaPredicted RBP12.09□□□□□ -0.47
SP140-210ENST00000479539 DGKDQ16760 1214 aa12.09□□□□□ -0.47
SP140-210ENST00000479539 HSDL1Q3SXM5 330 aa12.09□□□□□ -0.47
SP140-210ENST00000479539 MFSD5Q6N075 450 aa12.09□□□□□ -0.47
SP140-210ENST00000479539 PLCD3Q8N3E9 789 aa12.09□□□□□ -0.47
SP140-210ENST00000479539 SPATA33Q96N06 139 aa12.09□□□□□ -0.47
SP140-210ENST00000479539 SENP7Q9BQF6 1050 aa12.09□□□□□ -0.47
SP140-210ENST00000479539 GLT8D2Q9H1C3 349 aa12.09□□□□□ -0.47
SP140-210ENST00000479539 TRPV6Q9H1D0 765 aa12.09□□□□□ -0.47
SP140-210ENST00000479539 PDRG1Q9NUG6 133 aa12.09□□□□□ -0.47
SP140-210ENST00000479539 RTEL1Q9NZ71 1219 aa12.09□□□□□ -0.47
SP140-210ENST00000479539 SOX1O00570 391 aaPredicted RBP12.08□□□□□ -0.48
SP140-210ENST00000479539 FOSP01100 380 aaPredicted RBP12.08□□□□□ -0.48
SP140-210ENST00000479539 ITGB5P18084 799 aa12.08□□□□□ -0.48
SP140-210ENST00000479539 CLK2P49760 499 aaKnown RBP12.08□□□□□ -0.48
SP140-210ENST00000479539 ADCY7P51828 1080 aa12.08□□□□□ -0.48
SP140-210ENST00000479539 EPHB4P54760 987 aa12.08□□□□□ -0.48
SP140-210ENST00000479539 CCT2P78371 535 aaKnown RBP12.08□□□□□ -0.48
SP140-210ENST00000479539 FPGSQ05932 587 aa12.08□□□□□ -0.48
SP140-210ENST00000479539 NEDD9Q14511 834 aa12.08□□□□□ -0.48
SP140-210ENST00000479539 SHHQ15465 462 aa12.08□□□□□ -0.48
SP140-210ENST00000479539 NLRX1Q86UT6 975 aa12.08□□□□□ -0.48
SP140-210ENST00000479539 SESTD1Q86VW0 696 aa12.08□□□□□ -0.48
SP140-210ENST00000479539 GPRASP2Q96D09 838 aa12.08□□□□□ -0.48
SP140-210ENST00000479539 RNF26Q9BY78 433 aaPredicted RBP12.08□□□□□ -0.48
SP140-210ENST00000479539 BCAS3Q9H6U6 928 aa12.08□□□□□ -0.48
SP140-210ENST00000479539 MLXIPQ9HAP2 919 aa12.08□□□□□ -0.48
SP140-210ENST00000479539 TRMT13Q9NUP7 481 aaKnown RBP12.08□□□□□ -0.48
SP140-210ENST00000479539 UBIAD1Q9Y5Z9 338 aa12.08□□□□□ -0.48
SP140-210ENST00000479539 LRRC37A2A6NM11 1700 aa12.08□□□□□ -0.48
SP140-210ENST00000479539 ESYT2A0FGR8 921 aa12.07□□□□□ -0.48
SP140-210ENST00000479539 HAS3O00219 553 aa12.07□□□□□ -0.48
SP140-210ENST00000479539 MAFGO15525 162 aa12.07□□□□□ -0.48
SP140-210ENST00000479539 F2P00734 622 aa12.07□□□□□ -0.48
SP140-210ENST00000479539 AP3B2Q13367 1082 aa12.07□□□□□ -0.48
SP140-210ENST00000479539 C9orf50Q5SZB4 431 aa12.07□□□□□ -0.48
SP140-210ENST00000479539 METTL7BQ6UX53 244 aa12.07□□□□□ -0.48
SP140-210ENST00000479539 TMEM199Q8N511 208 aa12.07□□□□□ -0.48
SP140-210ENST00000479539 PHKBQ93100 1093 aa12.07□□□□□ -0.48
SP140-210ENST00000479539 CDHR1Q96JP9 859 aa12.07□□□□□ -0.48
SP140-210ENST00000479539 NOC4LQ9BVI4 516 aaKnown RBP12.07□□□□□ -0.48
SP140-210ENST00000479539 ZMYND12Q9H0C1 365 aa12.07□□□□□ -0.48
SP140-210ENST00000479539 HIPK3Q9H422 1215 aa12.07□□□□□ -0.48
SP140-210ENST00000479539 EHMT1Q9H9B1 1298 aa12.07□□□□□ -0.48
SP140-210ENST00000479539 NCOA5Q9HCD5 579 aaKnown RBP12.07□□□□□ -0.48
SP140-210ENST00000479539 JADE2Q9NQC1 790 aa12.07□□□□□ -0.48
SP140-210ENST00000479539 SZT2Q5T011 3432 aa12.07□□□□□ -0.48
SP140-210ENST00000479539 SORBS3O60504 671 aa12.06□□□□□ -0.48
SP140-210ENST00000479539 SEC24BO95487 1268 aa12.06□□□□□ -0.48
SP140-210ENST00000479539 CYP2C18P33260 490 aa12.06□□□□□ -0.48
SP140-210ENST00000479539 PSEN2P49810 448 aa12.06□□□□□ -0.48
SP140-210ENST00000479539 AKAP17AQ02040 695 aaKnown RBP12.06□□□□□ -0.48
SP140-210ENST00000479539 PPIGQ13427 754 aaKnown RBP eCLIP12.06□□□□□ -0.48
SP140-210ENST00000479539 FAM47CQ5HY64 1035 aa12.06□□□□□ -0.48
SP140-210ENST00000479539 MCTP2Q6DN12 878 aa12.06□□□□□ -0.48
SP140-210ENST00000479539 GPR153Q6NV75 609 aa12.06□□□□□ -0.48
SP140-210ENST00000479539 C16orf59Q7L2K0 433 aa12.06□□□□□ -0.48
SP140-210ENST00000479539 CYFIP1Q7L576 1253 aa12.06□□□□□ -0.48
SP140-210ENST00000479539 GIMAP8Q8ND71 665 aaPredicted RBP12.06□□□□□ -0.48
SP140-210ENST00000479539 CCDC12Q8WUD4 166 aaPredicted RBP12.06□□□□□ -0.48
SP140-210ENST00000479539 LRCH3Q96II8 777 aa12.06□□□□□ -0.48
SP140-210ENST00000479539 LARP6Q9BRS8 491 aaKnown RBP12.06□□□□□ -0.48
SP140-210ENST00000479539 C16orf70Q9BSU1 422 aa12.06□□□□□ -0.48
SP140-210ENST00000479539 KATNAL1Q9BW62 490 aa12.06□□□□□ -0.48
SP140-210ENST00000479539 SLC26A6Q9BXS9 759 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms