RNA–Protein interactions for RNA: ENST00000478896.2

VCL-205, Transcript of vinculin, humanhuman

TSL 5

Gene VCL, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-205ENST00000478896 PTK7Q13308 1070 aa15.36■□□□□ 0.05
VCL-205ENST00000478896 GRM4Q14833 912 aa15.36■□□□□ 0.05
VCL-205ENST00000478896 SART3Q15020 963 aaKnown RBP15.36■□□□□ 0.05
VCL-205ENST00000478896 TTC22Q5TAA0 569 aa15.36■□□□□ 0.05
VCL-205ENST00000478896 KRT40Q6A162 431 aa15.36■□□□□ 0.05
VCL-205ENST00000478896 TMCO2Q7Z6W1 182 aaPredicted RBP15.36■□□□□ 0.05
VCL-205ENST00000478896 FCHSD1Q86WN1 690 aa15.36■□□□□ 0.05
VCL-205ENST00000478896 SAMD3Q8N6K7 520 aa15.36■□□□□ 0.05
VCL-205ENST00000478896 MTMR8Q96EF0 704 aa15.36■□□□□ 0.05
VCL-205ENST00000478896 PIGSQ96S52 555 aa15.36■□□□□ 0.05
VCL-205ENST00000478896 MLXIPQ9HAP2 919 aa15.36■□□□□ 0.05
VCL-205ENST00000478896 PRRC2BQ5JSZ5 2229 aaKnown RBP15.35■□□□□ 0.05
VCL-205ENST00000478896 HAS3O00219 553 aa15.35■□□□□ 0.05
VCL-205ENST00000478896 RGS20O76081 388 aa15.35■□□□□ 0.05
VCL-205ENST00000478896 CXCL10P02778 98 aa15.35■□□□□ 0.05
VCL-205ENST00000478896 GSPT1P15170 499 aaKnown RBP15.35■□□□□ 0.05
VCL-205ENST00000478896 UBA1P22314 1058 aaKnown RBP15.35■□□□□ 0.05
VCL-205ENST00000478896 WTAPQ15007 396 aa15.35■□□□□ 0.05
VCL-205ENST00000478896 HSDL1Q3SXM5 330 aa15.35■□□□□ 0.05
VCL-205ENST00000478896 CELF3Q5SZQ8 465 aaKnown RBP15.35■□□□□ 0.05
VCL-205ENST00000478896 MYSM1Q5VVJ2 828 aa15.35■□□□□ 0.05
VCL-205ENST00000478896 STOX1Q6ZVD7 989 aa15.35■□□□□ 0.05
VCL-205ENST00000478896 IL31RAQ8NI17 732 aa15.35■□□□□ 0.05
VCL-205ENST00000478896 ZFP91Q96JP5 570 aaPredicted RBP15.35■□□□□ 0.05
VCL-205ENST00000478896 BAZ2BQ9UIF8 2168 aaKnown RBP15.35■□□□□ 0.05
VCL-205ENST00000478896 SIP14410 1827 aa15.34■□□□□ 0.05
VCL-205ENST00000478896 ABHD14A-ACY1A0A1B0GW23 586 aa15.34■□□□□ 0.05
VCL-205ENST00000478896 LCHNA4D1U4 455 aa15.34■□□□□ 0.05
VCL-205ENST00000478896 NOP56O00567 594 aaKnown RBP15.34■□□□□ 0.05
VCL-205ENST00000478896 EFCAB14O75071 495 aa15.34■□□□□ 0.05
VCL-205ENST00000478896 PPFIA4O75335 1185 aa15.34■□□□□ 0.05
VCL-205ENST00000478896 CYP21A2P08686 494 aa15.34■□□□□ 0.05
VCL-205ENST00000478896 POU3F3P20264 500 aaPredicted RBP15.34■□□□□ 0.05
VCL-205ENST00000478896 COL9A1P20849 921 aa15.34■□□□□ 0.05
VCL-205ENST00000478896 KCNQ1P51787 676 aa15.34■□□□□ 0.05
VCL-205ENST00000478896 ZNF200P98182 395 aaPredicted RBP15.34■□□□□ 0.05
VCL-205ENST00000478896 GRB10Q13322 594 aa15.34■□□□□ 0.05
VCL-205ENST00000478896 IKBKEQ14164 716 aa15.34■□□□□ 0.05
VCL-205ENST00000478896 GPNMBQ14956 572 aa15.34■□□□□ 0.05
VCL-205ENST00000478896 GNPTABQ3T906 1256 aa15.34■□□□□ 0.05
VCL-205ENST00000478896 ZNF618Q5T7W0 954 aa15.34■□□□□ 0.05
VCL-205ENST00000478896 FAM117BQ6P1L5 589 aa15.34■□□□□ 0.05
VCL-205ENST00000478896 SPRED2Q7Z698 418 aa15.34■□□□□ 0.05
VCL-205ENST00000478896 VSIG10LQ86VR7 867 aa15.34■□□□□ 0.05
VCL-205ENST00000478896 NCOA7Q8NI08 942 aa15.34■□□□□ 0.05
VCL-205ENST00000478896 GDPD5Q8WTR4 605 aa15.34■□□□□ 0.05
VCL-205ENST00000478896 NECAB3Q96P71 396 aaPredicted RBP15.34■□□□□ 0.05
VCL-205ENST00000478896 RIOX1Q9H6W3 641 aa15.34■□□□□ 0.05
VCL-205ENST00000478896 MTUS1Q9ULD2 1270 aa15.34■□□□□ 0.05
VCL-205ENST00000478896 COG5Q9UP83 839 aa15.34■□□□□ 0.05
VCL-205ENST00000478896 DOCK5Q9H7D0 1870 aa15.33■□□□□ 0.05
VCL-205ENST00000478896 MICAL3Q7RTP6 2002 aa15.33■□□□□ 0.04
VCL-205ENST00000478896 GJB5O95377 273 aa15.33■□□□□ 0.04
VCL-205ENST00000478896 TGFB3P10600 412 aa15.33■□□□□ 0.04
VCL-205ENST00000478896 HOXD8P13378 290 aaPredicted RBP15.33■□□□□ 0.04
VCL-205ENST00000478896 PDE4AP27815 886 aa15.33■□□□□ 0.04
VCL-205ENST00000478896 THPOP40225 353 aa15.33■□□□□ 0.04
VCL-205ENST00000478896 CATIPQ7Z7H3 387 aa15.33■□□□□ 0.04
VCL-205ENST00000478896 PIBF1Q8WXW3 757 aa15.33■□□□□ 0.04
VCL-205ENST00000478896 GPKOWQ92917 476 aaPredicted RBP eCLIP15.33■□□□□ 0.04
VCL-205ENST00000478896 WNT8BQ93098 351 aa15.33■□□□□ 0.04
VCL-205ENST00000478896 EMSYQ7Z589 1322 aa15.33■□□□□ 0.04
VCL-205ENST00000478896 PNMA6FA0A0J9YX94 578 aa15.32■□□□□ 0.04
VCL-205ENST00000478896 C17orf102A2RUQ5 167 aa15.32■□□□□ 0.04
VCL-205ENST00000478896 CYTH3O43739 400 aa15.32■□□□□ 0.04
VCL-205ENST00000478896 LGR5O75473 907 aa15.32■□□□□ 0.04
VCL-205ENST00000478896 BMP1P13497 986 aa15.32■□□□□ 0.04
VCL-205ENST00000478896 SP2Q02086 613 aa15.32■□□□□ 0.04
VCL-205ENST00000478896 PTH1RQ03431 593 aa15.32■□□□□ 0.04
VCL-205ENST00000478896 ATP6V0A1Q93050 837 aa15.32■□□□□ 0.04
VCL-205ENST00000478896 RAD9AQ99638 391 aa15.32■□□□□ 0.04
VCL-205ENST00000478896 SENP2Q9HC62 589 aa15.32■□□□□ 0.04
VCL-205ENST00000478896 RSPH10B2B2RC85 870 aa15.31■□□□□ 0.04
VCL-205ENST00000478896 E7EWF7 191 aa15.31■□□□□ 0.04
VCL-205ENST00000478896 H3BRB1 525 aa15.31■□□□□ 0.04
VCL-205ENST00000478896 AMHP03971 560 aa15.31■□□□□ 0.04
VCL-205ENST00000478896 LGALS2P05162 132 aa15.31■□□□□ 0.04
VCL-205ENST00000478896 RSPH10BP0C881 870 aa15.31■□□□□ 0.04
VCL-205ENST00000478896 CHMLP26374 656 aa15.31■□□□□ 0.04
VCL-205ENST00000478896 SLC35G1Q2M3R5 365 aa15.31■□□□□ 0.04
VCL-205ENST00000478896 TCTN1Q2MV58 587 aa15.31■□□□□ 0.04
VCL-205ENST00000478896 TRIM71Q2Q1W2 868 aaKnown RBP15.31■□□□□ 0.04
VCL-205ENST00000478896 MYOCDQ8IZQ8 938 aa15.31■□□□□ 0.04
VCL-205ENST00000478896 SMARCC2Q8TAQ2 1214 aa15.31■□□□□ 0.04
VCL-205ENST00000478896 CUL5Q93034 780 aa15.31■□□□□ 0.04
VCL-205ENST00000478896 HLA-CQ95604 372 aa15.31■□□□□ 0.04
VCL-205ENST00000478896 TGS1Q96RS0 853 aaKnown RBP15.31■□□□□ 0.04
VCL-205ENST00000478896 C16orf70Q9BSU1 422 aa15.31■□□□□ 0.04
VCL-205ENST00000478896 TUT1Q9H6E5 874 aaKnown RBP15.31■□□□□ 0.04
VCL-205ENST00000478896 LPXNO60711 386 aa15.3■□□□□ 0.04
VCL-205ENST00000478896 STAM2O75886 525 aa15.3■□□□□ 0.04
VCL-205ENST00000478896 SMIM10L2AP0DMW4 78 aa15.3■□□□□ 0.04
VCL-205ENST00000478896 SMIM10L2BP0DMW5 78 aa15.3■□□□□ 0.04
VCL-205ENST00000478896 TROAPQ12815 778 aa15.3■□□□□ 0.04
VCL-205ENST00000478896 NEDD9Q14511 834 aa15.3■□□□□ 0.04
VCL-205ENST00000478896 HIC1Q14526 733 aa15.3■□□□□ 0.04
VCL-205ENST00000478896 MBTPS1Q14703 1052 aa15.3■□□□□ 0.04
VCL-205ENST00000478896 TRAF7Q6Q0C0 670 aa15.3■□□□□ 0.04
VCL-205ENST00000478896 SERINC5Q86VE9 423 aa15.3■□□□□ 0.04
VCL-205ENST00000478896 CTCFLQ8NI51 663 aaPredicted RBP15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms