RNA–Protein interactions for RNA: ENST00000478616.1

SREBF1-212, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-212ENST00000478616 HEATR3Q7Z4Q2 680 aa21.61■■□□□ 1.05
SREBF1-212ENST00000478616 PSTPIP2Q9H939 334 aa21.61■■□□□ 1.05
SREBF1-212ENST00000478616 GGPS1O95749 300 aa21.6■■□□□ 1.05
SREBF1-212ENST00000478616 CYP2C9P11712 490 aa21.6■■□□□ 1.05
SREBF1-212ENST00000478616 FPGSQ05932 587 aa21.6■■□□□ 1.05
SREBF1-212ENST00000478616 SYNE3Q6ZMZ3 975 aa21.6■■□□□ 1.05
SREBF1-212ENST00000478616 RUFY3Q7L099 469 aa21.6■■□□□ 1.05
SREBF1-212ENST00000478616 PPTC7Q8NI37 304 aa21.6■■□□□ 1.05
SREBF1-212ENST00000478616 SMARCC2Q8TAQ2 1214 aa21.6■■□□□ 1.05
SREBF1-212ENST00000478616 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.6■■□□□ 1.053e-8■■■■□ 25.2
SREBF1-212ENST00000478616 KPNA6O60684 536 aa21.59■■□□□ 1.05
SREBF1-212ENST00000478616 PPFIA3O75145 1194 aa21.59■■□□□ 1.05
SREBF1-212ENST00000478616 ZNF286BP0CG31 522 aa21.59■■□□□ 1.05
SREBF1-212ENST00000478616 ITGB5P18084 799 aa21.59■■□□□ 1.05
SREBF1-212ENST00000478616 PDIA3P30101 505 aaKnown RBP21.59■■□□□ 1.05
SREBF1-212ENST00000478616 METAP2P50579 478 aaKnown RBP eCLIP21.59■■□□□ 1.05
SREBF1-212ENST00000478616 LAMC2Q13753 1193 aa21.59■■□□□ 1.05
SREBF1-212ENST00000478616 TMEM240Q5SV17 173 aa21.59■■□□□ 1.05
SREBF1-212ENST00000478616 RASIP1Q5U651 963 aa21.59■■□□□ 1.05
SREBF1-212ENST00000478616 NFRKBQ6P4R8 1299 aa21.59■■□□□ 1.05
SREBF1-212ENST00000478616 Q7L0L9 218 aa21.59■■□□□ 1.05
SREBF1-212ENST00000478616 PGBD1Q96JS3 809 aa21.59■■□□□ 1.05
SREBF1-212ENST00000478616 LARP6Q9BRS8 491 aaKnown RBP21.59■■□□□ 1.05
SREBF1-212ENST00000478616 SEZ6LQ9BYH1 1024 aa21.59■■□□□ 1.05
SREBF1-212ENST00000478616 UPF3BQ9BZI7 483 aaKnown RBP21.59■■□□□ 1.05
SREBF1-212ENST00000478616 TM6SF1Q9BZW5 370 aa21.59■■□□□ 1.05
SREBF1-212ENST00000478616 CDH23Q9H251 3354 aa21.59■■□□□ 1.05
SREBF1-212ENST00000478616 PTPRSQ13332 1948 aa21.59■■□□□ 1.05
SREBF1-212ENST00000478616 TLR3O15455 904 aaKnown RBP21.58■■□□□ 1.05
SREBF1-212ENST00000478616 ATP9AO75110 1047 aa21.58■■□□□ 1.05
SREBF1-212ENST00000478616 SEC24BO95487 1268 aa21.58■■□□□ 1.05
SREBF1-212ENST00000478616 F2P00734 622 aa21.58■■□□□ 1.05
SREBF1-212ENST00000478616 ACRP10323 421 aa21.58■■□□□ 1.05
SREBF1-212ENST00000478616 TGFB3P10600 412 aa21.58■■□□□ 1.05
SREBF1-212ENST00000478616 CLK2P49760 499 aaKnown RBP21.58■■□□□ 1.05
SREBF1-212ENST00000478616 SESTD1Q86VW0 696 aa21.58■■□□□ 1.05
SREBF1-212ENST00000478616 DHX37Q8IY37 1157 aaKnown RBP21.58■■□□□ 1.05
SREBF1-212ENST00000478616 C16orf70Q9BSU1 422 aa21.58■■□□□ 1.05
SREBF1-212ENST00000478616 HIPK3Q9H422 1215 aa21.58■■□□□ 1.05
SREBF1-212ENST00000478616 NCOA5Q9HCD5 579 aaKnown RBP21.58■■□□□ 1.05
SREBF1-212ENST00000478616 RIC8AQ9NPQ8 531 aa21.58■■□□□ 1.05
SREBF1-212ENST00000478616 BARHL2Q9NY43 387 aa21.58■■□□□ 1.05
SREBF1-212ENST00000478616 PCDHA6Q9UN73 950 aa21.58■■□□□ 1.05
SREBF1-212ENST00000478616 PCDHA8Q9Y5H6 950 aa21.58■■□□□ 1.05
SREBF1-212ENST00000478616 UBIAD1Q9Y5Z9 338 aa21.58■■□□□ 1.05
SREBF1-212ENST00000478616 PFKFB3Q16875 520 aaPredicted RBP21.57■■□□□ 1.04
SREBF1-212ENST00000478616 FAM109BQ6ICB4 259 aaPredicted RBP21.57■■□□□ 1.04
SREBF1-212ENST00000478616 GDF6Q6KF10 455 aaPredicted RBP21.57■■□□□ 1.04
SREBF1-212ENST00000478616 DHX38Q92620 1227 aaKnown RBP21.57■■□□□ 1.04
SREBF1-212ENST00000478616 PHKBQ93100 1093 aa21.57■■□□□ 1.04
SREBF1-212ENST00000478616 TMEM260Q9NX78 707 aa21.57■■□□□ 1.04
SREBF1-212ENST00000478616 STAM2O75886 525 aa21.56■■□□□ 1.04
SREBF1-212ENST00000478616 KCNA2P16389 499 aa21.56■■□□□ 1.04
SREBF1-212ENST00000478616 PSMA5P28066 241 aa21.56■■□□□ 1.04
SREBF1-212ENST00000478616 PSEN2P49810 448 aa21.56■■□□□ 1.04
SREBF1-212ENST00000478616 CCL23P55773 120 aa21.56■■□□□ 1.04
SREBF1-212ENST00000478616 GPNMBQ14956 572 aa21.56■■□□□ 1.04
SREBF1-212ENST00000478616 DGKDQ16760 1214 aa21.56■■□□□ 1.04
SREBF1-212ENST00000478616 PPP1R18Q6NYC8 613 aa21.56■■□□□ 1.04
SREBF1-212ENST00000478616 KCNV1Q6PIU1 500 aa21.56■■□□□ 1.04
SREBF1-212ENST00000478616 CYP2W1Q8TAV3 490 aa21.56■■□□□ 1.04
SREBF1-212ENST00000478616 CRYGNQ8WXF5 182 aa21.56■■□□□ 1.04
SREBF1-212ENST00000478616 CUL5Q93034 780 aa21.56■■□□□ 1.04
SREBF1-212ENST00000478616 WNT8BQ93098 351 aa21.56■■□□□ 1.04
SREBF1-212ENST00000478616 IL17RAQ96F46 866 aa21.56■■□□□ 1.04
SREBF1-212ENST00000478616 SCLYQ96I15 445 aa21.56■■□□□ 1.04
SREBF1-212ENST00000478616 PRPF3O43395 683 aaKnown RBP21.55■■□□□ 1.04
SREBF1-212ENST00000478616 FIBPO43427 364 aa21.55■■□□□ 1.04
SREBF1-212ENST00000478616 EDIL3O43854 480 aa21.55■■□□□ 1.04
SREBF1-212ENST00000478616 NAPAP54920 295 aa21.55■■□□□ 1.04
SREBF1-212ENST00000478616 CCT2P78371 535 aaKnown RBP21.55■■□□□ 1.04
SREBF1-212ENST00000478616 PTPN11Q06124 597 aaPredicted RBP21.55■■□□□ 1.04
SREBF1-212ENST00000478616 BRDTQ58F21 947 aaPredicted RBP21.55■■□□□ 1.04
SREBF1-212ENST00000478616 GPR153Q6NV75 609 aa21.55■■□□□ 1.04
SREBF1-212ENST00000478616 XRRA1Q6P2D8 792 aa21.55■■□□□ 1.04
SREBF1-212ENST00000478616 SPATA33Q96N06 139 aa21.55■■□□□ 1.04
SREBF1-212ENST00000478616 HDAC6Q9UBN7 1215 aa21.55■■□□□ 1.04
SREBF1-212ENST00000478616 NAP1L2Q9ULW6 460 aaPredicted RBP21.55■■□□□ 1.04
SREBF1-212ENST00000478616 PPFIA4O75335 1185 aa21.54■■□□□ 1.04
SREBF1-212ENST00000478616 SCG2P13521 617 aa21.54■■□□□ 1.04
SREBF1-212ENST00000478616 FGD1P98174 961 aa21.54■■□□□ 1.04
SREBF1-212ENST00000478616 ZNF200P98182 395 aaPredicted RBP21.54■■□□□ 1.04
SREBF1-212ENST00000478616 FAM47CQ5HY64 1035 aa21.54■■□□□ 1.04
SREBF1-212ENST00000478616 METTL7BQ6UX53 244 aa21.54■■□□□ 1.04
SREBF1-212ENST00000478616 ZNF365Q70YC5 407 aa21.54■■□□□ 1.04
SREBF1-212ENST00000478616 CYFIP1Q7L576 1253 aa21.54■■□□□ 1.04
SREBF1-212ENST00000478616 GPR20Q99678 358 aa21.54■■□□□ 1.04
SREBF1-212ENST00000478616 IL23AQ9NPF7 189 aa21.54■■□□□ 1.04
SREBF1-212ENST00000478616 CXXC1Q9P0U4 656 aaPredicted RBP21.54■■□□□ 1.04
SREBF1-212ENST00000478616 GTF2IRD1Q9UHL9 959 aa21.54■■□□□ 1.04
SREBF1-212ENST00000478616 COL6A3P12111 3177 aa21.54■■□□□ 1.04
SREBF1-212ENST00000478616 WDR81Q562E7 1941 aa21.53■■□□□ 1.04
SREBF1-212ENST00000478616 SMCO2A6NFE2 343 aa21.53■■□□□ 1.04
SREBF1-212ENST00000478616 IFNAR1P17181 557 aa21.53■■□□□ 1.04
SREBF1-212ENST00000478616 HOXC8P31273 242 aa21.53■■□□□ 1.04
SREBF1-212ENST00000478616 MFSD10Q14728 455 aa21.53■■□□□ 1.04
SREBF1-212ENST00000478616 TRIM71Q2Q1W2 868 aaKnown RBP21.53■■□□□ 1.04
SREBF1-212ENST00000478616 TRAF7Q6Q0C0 670 aa21.53■■□□□ 1.04
SREBF1-212ENST00000478616 SENP7Q9BQF6 1050 aa21.53■■□□□ 1.04
SREBF1-212ENST00000478616 ANO3Q9BYT9 981 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms