RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 IQCDQ96DY2 449 aa8.88□□□□□ -0.99
VMA21-203ENST00000477649 POLR3CQ9BUI4 534 aaPredicted RBP8.88□□□□□ -0.99
VMA21-203ENST00000477649 WDR11Q9BZH6 1224 aa8.88□□□□□ -0.99
VMA21-203ENST00000477649 THAP9Q9H5L6 903 aa8.88□□□□□ -0.99
VMA21-203ENST00000477649 ADARB2Q9NS39 739 aaKnown RBP8.88□□□□□ -0.99
VMA21-203ENST00000477649 PPP1R9AQ9ULJ8 1098 aa8.88□□□□□ -0.99
VMA21-203ENST00000477649 ITIH6Q6UXX5 1313 aa8.87□□□□□ -0.99
VMA21-203ENST00000477649 A0A087WWV3 80 aa8.87□□□□□ -0.99
VMA21-203ENST00000477649 PP2D1A8MPX8 630 aa8.87□□□□□ -0.99
VMA21-203ENST00000477649 KIF2AO00139 706 aaPredicted RBP8.87□□□□□ -0.99
VMA21-203ENST00000477649 OPLAHO14841 1288 aa8.87□□□□□ -0.99
VMA21-203ENST00000477649 KLRC4O43908 158 aa8.87□□□□□ -0.99
VMA21-203ENST00000477649 TPM1P09493 284 aa8.87□□□□□ -0.99
VMA21-203ENST00000477649 CCNE1P24864 410 aa8.87□□□□□ -0.99
VMA21-203ENST00000477649 RPA1P27694 616 aa8.87□□□□□ -0.99
VMA21-203ENST00000477649 CDC25AP30304 524 aa8.87□□□□□ -0.99
VMA21-203ENST00000477649 CCT6AP40227 531 aaKnown RBP8.87□□□□□ -0.99
VMA21-203ENST00000477649 FMR1Q06787 632 aaKnown RBP eCLIP8.87□□□□□ -0.99
VMA21-203ENST00000477649 PRR16Q569H4 304 aa8.87□□□□□ -0.99
VMA21-203ENST00000477649 ANGEL2Q5VTE6 544 aaKnown RBP8.87□□□□□ -0.99
VMA21-203ENST00000477649 SPECC1LQ69YQ0 1117 aa8.87□□□□□ -0.99
VMA21-203ENST00000477649 GPR153Q6NV75 609 aa8.87□□□□□ -0.99
VMA21-203ENST00000477649 TMC6Q7Z403 805 aa8.87□□□□□ -0.99
VMA21-203ENST00000477649 FCHSD1Q86WN1 690 aa8.87□□□□□ -0.99
VMA21-203ENST00000477649 CCDC65Q8IXS2 484 aa8.87□□□□□ -0.99
VMA21-203ENST00000477649 GUF1Q8N442 669 aaKnown RBP8.87□□□□□ -0.99
VMA21-203ENST00000477649 NLGN2Q8NFZ4 835 aa8.87□□□□□ -0.99
VMA21-203ENST00000477649 ZC3H15Q8WU90 426 aaKnown RBP8.87□□□□□ -0.99
VMA21-203ENST00000477649 NELFBQ8WX92 580 aa8.87□□□□□ -0.99
VMA21-203ENST00000477649 CCDC51Q96ER9 411 aa8.87□□□□□ -0.99
VMA21-203ENST00000477649 PNMA5Q96PV4 448 aa8.87□□□□□ -0.99
VMA21-203ENST00000477649 RIT2Q99578 217 aa8.87□□□□□ -0.99
VMA21-203ENST00000477649 BLZF1Q9H2G9 400 aa8.87□□□□□ -0.99
VMA21-203ENST00000477649 SLC38A10Q9HBR0 1119 aa8.87□□□□□ -0.99
VMA21-203ENST00000477649 TUFT1Q9NNX1 390 aa8.87□□□□□ -0.99
VMA21-203ENST00000477649 TMOD4Q9NZQ9 345 aa8.87□□□□□ -0.99
VMA21-203ENST00000477649 MAGEC2Q9UBF1 373 aaPredicted RBP8.87□□□□□ -0.99
VMA21-203ENST00000477649 HCSTQ9UBK5 93 aa8.87□□□□□ -0.99
VMA21-203ENST00000477649 LIMA1Q9UHB6 759 aaKnown RBP8.87□□□□□ -0.99
VMA21-203ENST00000477649 CCPG1Q9ULG6 757 aa8.87□□□□□ -0.99
VMA21-203ENST00000477649 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.87□□□□□ -0.99
VMA21-203ENST00000477649 ATP2A1O14983 1001 aa8.86□□□□□ -0.99
VMA21-203ENST00000477649 CFBP00751 764 aa8.86□□□□□ -0.99
VMA21-203ENST00000477649 SKILP12757 684 aa8.86□□□□□ -0.99
VMA21-203ENST00000477649 ATP1A3P13637 1013 aa8.86□□□□□ -0.99
VMA21-203ENST00000477649 PTPRAP18433 802 aa8.86□□□□□ -0.99
VMA21-203ENST00000477649 VCAM1P19320 739 aa8.86□□□□□ -0.99
VMA21-203ENST00000477649 PRCPP42785 496 aa8.86□□□□□ -0.99
VMA21-203ENST00000477649 LSM11P83369 360 aaKnown RBP eCLIP8.86□□□□□ -0.99
VMA21-203ENST00000477649 LRRC63Q05C16 580 aa8.86□□□□□ -0.99
VMA21-203ENST00000477649 PDE4DQ08499 809 aa8.86□□□□□ -0.99
VMA21-203ENST00000477649 PPP2R5CQ13362 524 aa8.86□□□□□ -0.99
VMA21-203ENST00000477649 NR1I3Q14994 352 aa8.86□□□□□ -0.99
VMA21-203ENST00000477649 CEP55Q53EZ4 464 aa8.86□□□□□ -0.99
VMA21-203ENST00000477649 KIAA1755Q5JYT7 1200 aa8.86□□□□□ -0.99
VMA21-203ENST00000477649 NBPF12Q5TAG4 269 aaPredicted RBP8.86□□□□□ -0.99
VMA21-203ENST00000477649 KLHL10Q6JEL2 608 aa8.86□□□□□ -0.99
VMA21-203ENST00000477649 CCDC174Q6PII3 467 aa8.86□□□□□ -0.99
VMA21-203ENST00000477649 FILIP1Q7Z7B0 1213 aa8.86□□□□□ -0.99
VMA21-203ENST00000477649 CACTINQ8WUQ7 758 aaKnown RBP8.86□□□□□ -0.99
VMA21-203ENST00000477649 P2RX5Q93086 422 aa8.86□□□□□ -0.99
VMA21-203ENST00000477649 LENG9Q96B70 501 aa8.86□□□□□ -0.99
VMA21-203ENST00000477649 KLRG1Q96E93 195 aa8.86□□□□□ -0.99
VMA21-203ENST00000477649 WRNIP1Q96S55 665 aa8.86□□□□□ -0.99
VMA21-203ENST00000477649 NAA15Q9BXJ9 866 aaKnown RBP8.86□□□□□ -0.99
VMA21-203ENST00000477649 KCNF1Q9H3M0 494 aa8.86□□□□□ -0.99
VMA21-203ENST00000477649 BLOC1S4Q9NUP1 217 aa8.86□□□□□ -0.99
VMA21-203ENST00000477649 HOXC10Q9NYD6 342 aa8.86□□□□□ -0.99
VMA21-203ENST00000477649 KCND2Q9NZV8 630 aa8.86□□□□□ -0.99
VMA21-203ENST00000477649 DNM3Q9UQ16 869 aa8.86□□□□□ -0.99
VMA21-203ENST00000477649 CTNND2Q9UQB3 1225 aa8.86□□□□□ -0.99
VMA21-203ENST00000477649 FRMPD4Q14CM0 1322 aa8.85□□□□□ -0.99
VMA21-203ENST00000477649 RPTORQ8N122 1335 aa8.85□□□□□ -0.99
VMA21-203ENST00000477649 IGLV3-22A0A075B6J6 115 aa8.85□□□□□ -0.99
VMA21-203ENST00000477649 SHTN1A0MZ66 631 aa8.85□□□□□ -0.99
VMA21-203ENST00000477649 UNCXA6NJT0 531 aa8.85□□□□□ -0.99
VMA21-203ENST00000477649 MEIS1O00470 390 aa8.85□□□□□ -0.99
VMA21-203ENST00000477649 MSH4O15457 936 aa8.85□□□□□ -0.99
VMA21-203ENST00000477649 MAFGO15525 162 aa8.85□□□□□ -0.99
VMA21-203ENST00000477649 PPP1R12BO60237 982 aaPredicted RBP8.85□□□□□ -0.99
VMA21-203ENST00000477649 STAM2O75886 525 aa8.85□□□□□ -0.99
VMA21-203ENST00000477649 FLOT1O75955 427 aa8.85□□□□□ -0.99
VMA21-203ENST00000477649 EGFRP00533 1210 aa8.85□□□□□ -0.99
VMA21-203ENST00000477649 INPP5BP32019 993 aa8.85□□□□□ -0.99
VMA21-203ENST00000477649 NF2P35240 595 aa8.85□□□□□ -0.99
VMA21-203ENST00000477649 PRELPP51888 382 aa8.85□□□□□ -0.99
VMA21-203ENST00000477649 SPIRE1Q08AE8 756 aa8.85□□□□□ -0.99
VMA21-203ENST00000477649 SPP2Q13103 211 aa8.85□□□□□ -0.99
VMA21-203ENST00000477649 ZYXQ15942 572 aaKnown RBP8.85□□□□□ -0.99
VMA21-203ENST00000477649 TCP11X2Q5H9J9 407 aa8.85□□□□□ -0.99
VMA21-203ENST00000477649 SH3D19Q5HYK7 790 aa8.85□□□□□ -0.99
VMA21-203ENST00000477649 ZNF467Q7Z7K2 595 aaPredicted RBP8.85□□□□□ -0.99
VMA21-203ENST00000477649 SULF1Q8IWU6 871 aa8.85□□□□□ -0.99
VMA21-203ENST00000477649 STAMQ92783 540 aa8.85□□□□□ -0.99
VMA21-203ENST00000477649 SLC5A5Q92911 643 aa8.85□□□□□ -0.99
VMA21-203ENST00000477649 DCPSQ96C86 337 aaKnown RBP8.85□□□□□ -0.99
VMA21-203ENST00000477649 PRIMPOLQ96LW4 560 aa8.85□□□□□ -0.99
VMA21-203ENST00000477649 TSG101Q99816 390 aa8.85□□□□□ -0.99
VMA21-203ENST00000477649 TANGO6Q9C0B7 1094 aa8.85□□□□□ -0.99
VMA21-203ENST00000477649 RTN4Q9NQC3 1192 aaKnown RBP8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms