RNA–Protein interactions for RNA: ENST00000477531.3

CLDN11-204, Transcript of claudin 11, humanhuman

TSL 3

Gene CLDN11, Length 1,065 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-204ENST00000477531 FTOQ9C0B1 505 aaKnown RBP eCLIP18.11■□□□□ 0.49
CLDN11-204ENST00000477531 CXXC1Q9P0U4 656 aaPredicted RBP18.11■□□□□ 0.49
CLDN11-204ENST00000477531 PIK3CDO00329 1044 aa18.1■□□□□ 0.49
CLDN11-204ENST00000477531 NOP56O00567 594 aaKnown RBP18.1■□□□□ 0.49
CLDN11-204ENST00000477531 SORBS3O60504 671 aa18.1■□□□□ 0.49
CLDN11-204ENST00000477531 IQCF3P0C7M6 154 aa18.1■□□□□ 0.49
CLDN11-204ENST00000477531 UBA1P22314 1058 aaKnown RBP18.1■□□□□ 0.49
CLDN11-204ENST00000477531 NEDD9Q14511 834 aa18.1■□□□□ 0.49
CLDN11-204ENST00000477531 KIAA0753Q2KHM9 967 aa18.1■□□□□ 0.49
CLDN11-204ENST00000477531 GDF6Q6KF10 455 aaPredicted RBP18.1■□□□□ 0.49
CLDN11-204ENST00000477531 XRRA1Q6P2D8 792 aa18.1■□□□□ 0.49
CLDN11-204ENST00000477531 USP17L6PQ6QN14 398 aa18.1■□□□□ 0.49
CLDN11-204ENST00000477531 DHX32Q7L7V1 743 aaKnown RBP18.1■□□□□ 0.49
CLDN11-204ENST00000477531 RAB11FIP4Q86YS3 637 aa18.1■□□□□ 0.49
CLDN11-204ENST00000477531 CMTR1Q8N1G2 835 aaKnown RBP18.1■□□□□ 0.49
CLDN11-204ENST00000477531 CCDC82Q8N4S0 544 aa18.1■□□□□ 0.49
CLDN11-204ENST00000477531 ZFP91Q96JP5 570 aaPredicted RBP18.1■□□□□ 0.49
CLDN11-204ENST00000477531 PSTPIP2Q9H939 334 aa18.1■□□□□ 0.49
CLDN11-204ENST00000477531 RBM28Q9NW13 759 aaKnown RBP18.1■□□□□ 0.49
CLDN11-204ENST00000477531 FRMPD4Q14CM0 1322 aa18.09■□□□□ 0.49
CLDN11-204ENST00000477531 F2P00734 622 aa18.09■□□□□ 0.49
CLDN11-204ENST00000477531 HMGB1P09429 215 aaKnown RBP18.09■□□□□ 0.49
CLDN11-204ENST00000477531 ZNF286BP0CG31 522 aa18.09■□□□□ 0.49
CLDN11-204ENST00000477531 PBX2P40425 430 aa18.09■□□□□ 0.49
CLDN11-204ENST00000477531 FGD1P98174 961 aa18.09■□□□□ 0.49
CLDN11-204ENST00000477531 HSDL1Q3SXM5 330 aa18.09■□□□□ 0.49
CLDN11-204ENST00000477531 NLRX1Q86UT6 975 aa18.09■□□□□ 0.49
CLDN11-204ENST00000477531 MAFAQ8NHW3 353 aaPredicted RBP18.09■□□□□ 0.49
CLDN11-204ENST00000477531 AFAP1L1Q8TED9 768 aa18.09■□□□□ 0.49
CLDN11-204ENST00000477531 RTEL1Q9NZ71 1219 aa18.09■□□□□ 0.49
CLDN11-204ENST00000477531 HDAC6Q9UBN7 1215 aa18.09■□□□□ 0.49
CLDN11-204ENST00000477531 GTF2IRD1Q9UHL9 959 aa18.09■□□□□ 0.49
CLDN11-204ENST00000477531 FIBPO43427 364 aa18.08■□□□□ 0.48
CLDN11-204ENST00000477531 PARNO95453 639 aaKnown RBP18.08■□□□□ 0.48
CLDN11-204ENST00000477531 HOXD8P13378 290 aaPredicted RBP18.08■□□□□ 0.48
CLDN11-204ENST00000477531 ICAM3P32942 547 aa18.08■□□□□ 0.48
CLDN11-204ENST00000477531 MRPS9P82933 396 aaKnown RBP18.08■□□□□ 0.48
CLDN11-204ENST00000477531 SP2Q02086 613 aa18.08■□□□□ 0.48
CLDN11-204ENST00000477531 GRIN2CQ14957 1233 aa18.08■□□□□ 0.48
CLDN11-204ENST00000477531 TSGA10IPQ3SY00 556 aa18.08■□□□□ 0.48
CLDN11-204ENST00000477531 PCNX4Q63HM2 1172 aa18.08■□□□□ 0.48
CLDN11-204ENST00000477531 TMTC3Q6ZXV5 915 aa18.08■□□□□ 0.48
CLDN11-204ENST00000477531 INPP4AQ96PE3 977 aaPredicted RBP18.08■□□□□ 0.48
CLDN11-204ENST00000477531 GAS2L1Q99501 681 aaPredicted RBP18.08■□□□□ 0.48
CLDN11-204ENST00000477531 SLC28A3Q9HAS3 691 aa18.08■□□□□ 0.48
CLDN11-204ENST00000477531 MYH7BA7E2Y1 1941 aa18.08■□□□□ 0.48
CLDN11-204ENST00000477531 A0A0C4DFX4 3053 aa18.07■□□□□ 0.48
CLDN11-204ENST00000477531 SPDYE3A6NKU9 549 aa18.07■□□□□ 0.48
CLDN11-204ENST00000477531 MEIS2O14770 477 aa18.07■□□□□ 0.48
CLDN11-204ENST00000477531 ZBTB43O43298 467 aa18.07■□□□□ 0.48
CLDN11-204ENST00000477531 ATP2A2P16615 1042 aaKnown RBP18.07■□□□□ 0.48
CLDN11-204ENST00000477531 COL9A3Q14050 684 aaPredicted RBP18.07■□□□□ 0.48
CLDN11-204ENST00000477531 RTN1Q16799 776 aa18.07■□□□□ 0.48
CLDN11-204ENST00000477531 APOA5Q6Q788 366 aa18.07■□□□□ 0.48
CLDN11-204ENST00000477531 METTL7BQ6UX53 244 aa18.07■□□□□ 0.48
CLDN11-204ENST00000477531 HEATR3Q7Z4Q2 680 aa18.07■□□□□ 0.48
CLDN11-204ENST00000477531 GPKOWQ92917 476 aaPredicted RBP eCLIP18.07■□□□□ 0.48
CLDN11-204ENST00000477531 EHMT1Q9H9B1 1298 aa18.07■□□□□ 0.48
CLDN11-204ENST00000477531 hCG_1642624A0A1W2PR95 340 aa18.06■□□□□ 0.48
CLDN11-204ENST00000477531 SPATA31C2B4DYI2 1134 aa18.06■□□□□ 0.48
CLDN11-204ENST00000477531 HAS3O00219 553 aa18.06■□□□□ 0.48
CLDN11-204ENST00000477531 NEFLP07196 543 aa18.06■□□□□ 0.48
CLDN11-204ENST00000477531 SELPP16109 830 aa18.06■□□□□ 0.48
CLDN11-204ENST00000477531 EXOSC10Q01780 885 aaKnown RBP18.06■□□□□ 0.48
CLDN11-204ENST00000477531 PTK7Q13308 1070 aa18.06■□□□□ 0.48
CLDN11-204ENST00000477531 LRRC8DQ7L1W4 858 aa18.06■□□□□ 0.48
CLDN11-204ENST00000477531 CYFIP1Q7L576 1253 aa18.06■□□□□ 0.48
CLDN11-204ENST00000477531 RASEFQ8IZ41 740 aa18.06■□□□□ 0.48
CLDN11-204ENST00000477531 GIMAP8Q8ND71 665 aaPredicted RBP18.06■□□□□ 0.48
CLDN11-204ENST00000477531 CDHR1Q96JP9 859 aa18.06■□□□□ 0.48
CLDN11-204ENST00000477531 USP26Q9BXU7 913 aa18.06■□□□□ 0.48
CLDN11-204ENST00000477531 NKX2-4Q9H2Z4 354 aa18.06■□□□□ 0.48
CLDN11-204ENST00000477531 NAP1L2Q9ULW6 460 aaPredicted RBP18.06■□□□□ 0.48
CLDN11-204ENST00000477531 H3BRB1 525 aa18.05■□□□□ 0.48
CLDN11-204ENST00000477531 DLL1O00548 723 aa18.05■□□□□ 0.48
CLDN11-204ENST00000477531 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.05■□□□□ 0.48
CLDN11-204ENST00000477531 TCEANC2Q96MN5 208 aa18.05■□□□□ 0.48
CLDN11-204ENST00000477531 SLC9A7Q96T83 725 aa18.05■□□□□ 0.48
CLDN11-204ENST00000477531 SENP7Q9BQF6 1050 aa18.05■□□□□ 0.48
CLDN11-204ENST00000477531 TUT1Q9H6E5 874 aaKnown RBP18.05■□□□□ 0.48
CLDN11-204ENST00000477531 PCDHA11Q9Y5I1 949 aa18.05■□□□□ 0.48
CLDN11-204ENST00000477531 GOLGA8AA7E2F4 631 aa18.04■□□□□ 0.48
CLDN11-204ENST00000477531 GOLGA8BA8MQT2 603 aa18.04■□□□□ 0.48
CLDN11-204ENST00000477531 KIF28PB7ZC32 967 aa18.04■□□□□ 0.48
CLDN11-204ENST00000477531 BAIAP3O94812 1187 aa18.04■□□□□ 0.48
CLDN11-204ENST00000477531 LGALS2P05162 132 aa18.04■□□□□ 0.48
CLDN11-204ENST00000477531 GNAT1P11488 350 aa18.04■□□□□ 0.48
CLDN11-204ENST00000477531 CKBP12277 381 aa18.04■□□□□ 0.48
CLDN11-204ENST00000477531 KCNJ6P48051 423 aa18.04■□□□□ 0.48
CLDN11-204ENST00000477531 RABGGTBP53611 331 aa18.04■□□□□ 0.48
CLDN11-204ENST00000477531 ADCK5Q3MIX3 580 aa18.04■□□□□ 0.48
CLDN11-204ENST00000477531 PHOSPHO2Q8TCD6 241 aa18.04■□□□□ 0.48
CLDN11-204ENST00000477531 GPRASP2Q96D09 838 aa18.04■□□□□ 0.48
CLDN11-204ENST00000477531 VWCEQ96DN2 955 aa18.04■□□□□ 0.48
CLDN11-204ENST00000477531 C16orf70Q9BSU1 422 aa18.04■□□□□ 0.48
CLDN11-204ENST00000477531 ZNF215Q9UL58 517 aaPredicted RBP18.04■□□□□ 0.48
CLDN11-204ENST00000477531 CDH23Q9H251 3354 aa18.04■□□□□ 0.48
CLDN11-204ENST00000477531 MYO9BQ13459 2157 aa18.03■□□□□ 0.48
CLDN11-204ENST00000477531 KLF18A0A0U1RQI7 1052 aa18.03■□□□□ 0.48
CLDN11-204ENST00000477531 CCDC196A0A1B0GTZ2 297 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms