RNA–Protein interactions for RNA: ENST00000477169.5

SMARCD3-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 5

Gene SMARCD3, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-210ENST00000477169 STK3Q13188 491 aa19.83■□□□□ 0.77
SMARCD3-210ENST00000477169 PIBF1Q8WXW3 757 aa19.83■□□□□ 0.77
SMARCD3-210ENST00000477169 TRMT13Q9NUP7 481 aaKnown RBP19.83■□□□□ 0.77
SMARCD3-210ENST00000477169 DDX41Q9UJV9 622 aaKnown RBP19.83■□□□□ 0.77
SMARCD3-210ENST00000477169 SCN10AQ9Y5Y9 1956 aa19.83■□□□□ 0.76
SMARCD3-210ENST00000477169 PFKFB2O60825 505 aa19.82■□□□□ 0.76
SMARCD3-210ENST00000477169 FGBP02675 491 aa19.82■□□□□ 0.76
SMARCD3-210ENST00000477169 CCL23P55773 120 aa19.82■□□□□ 0.76
SMARCD3-210ENST00000477169 ARHGAP1Q07960 439 aa19.82■□□□□ 0.76
SMARCD3-210ENST00000477169 AFG1LQ8WV93 481 aa19.82■□□□□ 0.76
SMARCD3-210ENST00000477169 RRP36Q96EU6 259 aaKnown RBP19.82■□□□□ 0.76
SMARCD3-210ENST00000477169 PDCD2LQ9BRP1 358 aa19.82■□□□□ 0.76
SMARCD3-210ENST00000477169 TTYH1Q9H313 450 aaPredicted RBP19.82■□□□□ 0.76
SMARCD3-210ENST00000477169 GCOM1H8Y6P7 765 aaPredicted RBP19.81■□□□□ 0.76
SMARCD3-210ENST00000477169 LARGE1O95461 756 aa19.81■□□□□ 0.76
SMARCD3-210ENST00000477169 POLR2MP0CAP2 368 aa19.81■□□□□ 0.76
SMARCD3-210ENST00000477169 HOXA13P31271 388 aaPredicted RBP19.81■□□□□ 0.76
SMARCD3-210ENST00000477169 NTRK3Q16288 839 aa19.81■□□□□ 0.76
SMARCD3-210ENST00000477169 ME3Q16798 604 aa19.81■□□□□ 0.76
SMARCD3-210ENST00000477169 FAM47CQ5HY64 1035 aa19.81■□□□□ 0.76
SMARCD3-210ENST00000477169 KCNV1Q6PIU1 500 aa19.81■□□□□ 0.76
SMARCD3-210ENST00000477169 VSIG10LQ86VR7 867 aa19.81■□□□□ 0.76
SMARCD3-210ENST00000477169 RPUSD2Q8IZ73 545 aaKnown RBP19.81■□□□□ 0.76
SMARCD3-210ENST00000477169 HERVK_113Q902F9 699 aa19.81■□□□□ 0.76
SMARCD3-210ENST00000477169 EMID1Q96A84 441 aaPredicted RBP19.81■□□□□ 0.76
SMARCD3-210ENST00000477169 CDX2Q99626 313 aaPredicted RBP19.81■□□□□ 0.76
SMARCD3-210ENST00000477169 WNT8AQ9H1J5 351 aa19.81■□□□□ 0.76
SMARCD3-210ENST00000477169 SLKQ9H2G2 1235 aaPredicted RBP19.81■□□□□ 0.76
SMARCD3-210ENST00000477169 LIMCH1Q9UPQ0 1083 aa19.81■□□□□ 0.76
SMARCD3-210ENST00000477169 MRVI1Q9Y6F6 885 aa19.81■□□□□ 0.76
SMARCD3-210ENST00000477169 hCG_1642624A0A1W2PR95 340 aa19.8■□□□□ 0.76
SMARCD3-210ENST00000477169 MMP3P08254 477 aa19.8■□□□□ 0.76
SMARCD3-210ENST00000477169 CYP2C9P11712 490 aa19.8■□□□□ 0.76
SMARCD3-210ENST00000477169 MYCLP12524 364 aaPredicted RBP19.8■□□□□ 0.76
SMARCD3-210ENST00000477169 SCRN1Q12765 414 aa19.8■□□□□ 0.76
SMARCD3-210ENST00000477169 LAMC2Q13753 1193 aa19.8■□□□□ 0.76
SMARCD3-210ENST00000477169 PGM5Q15124 567 aa19.8■□□□□ 0.76
SMARCD3-210ENST00000477169 IL27Q8NEV9 243 aa19.8■□□□□ 0.76
SMARCD3-210ENST00000477169 MTIF3Q9H2K0 278 aaKnown RBP19.8■□□□□ 0.76
SMARCD3-210ENST00000477169 ST18O60284 1047 aa19.79■□□□□ 0.76
SMARCD3-210ENST00000477169 RGS20O76081 388 aa19.79■□□□□ 0.76
SMARCD3-210ENST00000477169 IFNAR1P17181 557 aa19.79■□□□□ 0.76
SMARCD3-210ENST00000477169 DNAJB2P25686 324 aa19.79■□□□□ 0.76
SMARCD3-210ENST00000477169 DGKDQ16760 1214 aa19.79■□□□□ 0.76
SMARCD3-210ENST00000477169 NECAB1Q8N987 351 aa19.79■□□□□ 0.76
SMARCD3-210ENST00000477169 SEC63Q9UGP8 760 aaKnown RBP19.79■□□□□ 0.76
SMARCD3-210ENST00000477169 V9GY48 417 aaPredicted RBP19.79■□□□□ 0.76
SMARCD3-210ENST00000477169 CD2BP2O95400 341 aaKnown RBP19.78■□□□□ 0.76
SMARCD3-210ENST00000477169 TGFB3P10600 412 aa19.78■□□□□ 0.76
SMARCD3-210ENST00000477169 FCHSD1Q86WN1 690 aa19.78■□□□□ 0.76
SMARCD3-210ENST00000477169 DHX37Q8IY37 1157 aaKnown RBP19.78■□□□□ 0.76
SMARCD3-210ENST00000477169 PHKBQ93100 1093 aa19.78■□□□□ 0.76
SMARCD3-210ENST00000477169 SCLYQ96I15 445 aa19.78■□□□□ 0.76
SMARCD3-210ENST00000477169 PITPNM1O00562 1244 aa19.77■□□□□ 0.76
SMARCD3-210ENST00000477169 CPLX1O14810 134 aa19.77■□□□□ 0.76
SMARCD3-210ENST00000477169 PFKMP08237 780 aa19.77■□□□□ 0.76
SMARCD3-210ENST00000477169 CCND2P30279 289 aa19.77■□□□□ 0.76
SMARCD3-210ENST00000477169 SESTD1Q86VW0 696 aa19.77■□□□□ 0.76
SMARCD3-210ENST00000477169 PPTC7Q8NI37 304 aa19.77■□□□□ 0.76
SMARCD3-210ENST00000477169 KAT2BQ92831 832 aa19.77■□□□□ 0.76
SMARCD3-210ENST00000477169 GTF3C6Q969F1 213 aa19.77■□□□□ 0.76
SMARCD3-210ENST00000477169 TIFAQ96CG3 184 aa19.77■□□□□ 0.76
SMARCD3-210ENST00000477169 ZSCAN31Q96LW9 406 aaPredicted RBP19.77■□□□□ 0.76
SMARCD3-210ENST00000477169 CXXC1Q9P0U4 656 aaPredicted RBP19.77■□□□□ 0.76
SMARCD3-210ENST00000477169 GRXCR1A8MXD5 290 aa19.76■□□□□ 0.75
SMARCD3-210ENST00000477169 PRPF3O43395 683 aaKnown RBP19.76■□□□□ 0.75
SMARCD3-210ENST00000477169 PPFIA3O75145 1194 aa19.76■□□□□ 0.75
SMARCD3-210ENST00000477169 CHMP4BP1P59074 171 aa19.76■□□□□ 0.75
SMARCD3-210ENST00000477169 ST3GAL1Q11201 340 aa19.76■□□□□ 0.75
SMARCD3-210ENST00000477169 BFSP2Q13515 415 aa19.76■□□□□ 0.75
SMARCD3-210ENST00000477169 MYSM1Q5VVJ2 828 aa19.76■□□□□ 0.75
SMARCD3-210ENST00000477169 OTOP2Q7RTS6 562 aa19.76■□□□□ 0.75
SMARCD3-210ENST00000477169 RETREG2Q8NC44 543 aa19.76■□□□□ 0.75
SMARCD3-210ENST00000477169 IL31RAQ8NI17 732 aa19.76■□□□□ 0.75
SMARCD3-210ENST00000477169 PPP1R13LQ8WUF5 828 aa19.76■□□□□ 0.75
SMARCD3-210ENST00000477169 VWCEQ96DN2 955 aa19.76■□□□□ 0.75
SMARCD3-210ENST00000477169 RNF26Q9BY78 433 aaPredicted RBP19.76■□□□□ 0.75
SMARCD3-210ENST00000477169 PBX4Q9BYU1 374 aa19.76■□□□□ 0.75
SMARCD3-210ENST00000477169 NOD1Q9Y239 953 aa19.76■□□□□ 0.75
SMARCD3-210ENST00000477169 MYH7BA7E2Y1 1941 aa19.76■□□□□ 0.75
SMARCD3-210ENST00000477169 PPFIA4O75335 1185 aa19.75■□□□□ 0.75
SMARCD3-210ENST00000477169 STAM2O75886 525 aa19.75■□□□□ 0.75
SMARCD3-210ENST00000477169 CTDNEP1O95476 244 aa19.75■□□□□ 0.75
SMARCD3-210ENST00000477169 RFC2P35250 354 aa19.75■□□□□ 0.75
SMARCD3-210ENST00000477169 PKN1Q16512 942 aa19.75■□□□□ 0.75
SMARCD3-210ENST00000477169 PTGISQ16647 500 aa19.75■□□□□ 0.75
SMARCD3-210ENST00000477169 CELF3Q5SZQ8 465 aaKnown RBP19.75■□□□□ 0.75
SMARCD3-210ENST00000477169 CPLX2Q6PUV4 134 aaKnown RBP19.75■□□□□ 0.75
SMARCD3-210ENST00000477169 MYLIPQ8WY64 445 aa19.75■□□□□ 0.75
SMARCD3-210ENST00000477169 KATNAL1Q9BW62 490 aa19.75■□□□□ 0.75
SMARCD3-210ENST00000477169 SLC26A6Q9BXS9 759 aa19.75■□□□□ 0.75
SMARCD3-210ENST00000477169 ZNF576Q9H609 170 aa19.75■□□□□ 0.75
SMARCD3-210ENST00000477169 A0A0C4DFX4 3053 aa19.74■□□□□ 0.75
SMARCD3-210ENST00000477169 IQCF3P0C7M6 154 aa19.74■□□□□ 0.75
SMARCD3-210ENST00000477169 HOXD8P13378 290 aaPredicted RBP19.74■□□□□ 0.75
SMARCD3-210ENST00000477169 PBX2P40425 430 aa19.74■□□□□ 0.75
SMARCD3-210ENST00000477169 SSRP1Q08945 709 aaKnown RBP19.74■□□□□ 0.75
SMARCD3-210ENST00000477169 RAB30Q15771 203 aa19.74■□□□□ 0.75
SMARCD3-210ENST00000477169 PFKFB3Q16875 520 aaPredicted RBP19.74■□□□□ 0.75
SMARCD3-210ENST00000477169 WWC2Q6AWC2 1192 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms