RNA–Protein interactions for RNA: ENST00000476640.1

HMGCS2-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

TSL 3

Gene HMGCS2, Length 857 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-203ENST00000476640 CHD7Q9P2D1 2997 aa15.48■□□□□ 0.07
HMGCS2-203ENST00000476640 HDAC6Q9UBN7 1215 aa15.48■□□□□ 0.07
HMGCS2-203ENST00000476640 PRRC2BQ5JSZ5 2229 aaKnown RBP15.47■□□□□ 0.07
HMGCS2-203ENST00000476640 GGPS1O95749 300 aa15.47■□□□□ 0.07
HMGCS2-203ENST00000476640 CA3P07451 260 aa15.47■□□□□ 0.07
HMGCS2-203ENST00000476640 ZNF286BP0CG31 522 aa15.47■□□□□ 0.07
HMGCS2-203ENST00000476640 HOXD8P13378 290 aaPredicted RBP15.47■□□□□ 0.07
HMGCS2-203ENST00000476640 MYOGP15173 224 aa15.47■□□□□ 0.07
HMGCS2-203ENST00000476640 KIF5BP33176 963 aa15.47■□□□□ 0.07
HMGCS2-203ENST00000476640 MRPS5P82675 430 aaKnown RBP15.47■□□□□ 0.07
HMGCS2-203ENST00000476640 TROAPQ12815 778 aa15.47■□□□□ 0.07
HMGCS2-203ENST00000476640 CNKSR3Q6P9H4 555 aa15.47■□□□□ 0.07
HMGCS2-203ENST00000476640 CASC1Q6TDU7 716 aa15.47■□□□□ 0.07
HMGCS2-203ENST00000476640 FCHSD1Q86WN1 690 aa15.47■□□□□ 0.07
HMGCS2-203ENST00000476640 CTCFLQ8NI51 663 aaPredicted RBP15.47■□□□□ 0.07
HMGCS2-203ENST00000476640 MAP3K14Q99558 947 aa15.47■□□□□ 0.07
HMGCS2-203ENST00000476640 MLXIPQ9HAP2 919 aa15.47■□□□□ 0.07
HMGCS2-203ENST00000476640 MICAL3Q7RTP6 2002 aa15.46■□□□□ 0.07
HMGCS2-203ENST00000476640 VCANP13611 3396 aa15.46■□□□□ 0.07
HMGCS2-203ENST00000476640 HAS3O00219 553 aa15.46■□□□□ 0.07
HMGCS2-203ENST00000476640 CKBP12277 381 aa15.46■□□□□ 0.07
HMGCS2-203ENST00000476640 TMTC2Q8N394 836 aa15.46■□□□□ 0.07
HMGCS2-203ENST00000476640 MAP4K1Q92918 833 aa15.46■□□□□ 0.07
HMGCS2-203ENST00000476640 CUL5Q93034 780 aa15.46■□□□□ 0.07
HMGCS2-203ENST00000476640 RRP36Q96EU6 259 aaKnown RBP15.46■□□□□ 0.07
HMGCS2-203ENST00000476640 ASB2Q96Q27 587 aa15.46■□□□□ 0.07
HMGCS2-203ENST00000476640 LZTS2Q9BRK4 669 aa15.46■□□□□ 0.07
HMGCS2-203ENST00000476640 MTA3Q9BTC8 594 aa15.46■□□□□ 0.07
HMGCS2-203ENST00000476640 ZBED2Q9BTP6 218 aa15.46■□□□□ 0.07
HMGCS2-203ENST00000476640 SEC63Q9UGP8 760 aaKnown RBP15.46■□□□□ 0.07
HMGCS2-203ENST00000476640 EMSYQ7Z589 1322 aa15.45■□□□□ 0.06
HMGCS2-203ENST00000476640 ABHD14A-ACY1A0A1B0GW23 586 aa15.45■□□□□ 0.06
HMGCS2-203ENST00000476640 TLL1O43897 1013 aa15.45■□□□□ 0.06
HMGCS2-203ENST00000476640 RGS20O76081 388 aa15.45■□□□□ 0.06
HMGCS2-203ENST00000476640 DDAH1O94760 285 aa15.45■□□□□ 0.06
HMGCS2-203ENST00000476640 UBA1P22314 1058 aaKnown RBP15.45■□□□□ 0.06
HMGCS2-203ENST00000476640 SMARCA1P28370 1054 aa15.45■□□□□ 0.06
HMGCS2-203ENST00000476640 GNAQP50148 359 aa15.45■□□□□ 0.06
HMGCS2-203ENST00000476640 AAK1Q2M2I8 961 aa15.45■□□□□ 0.06
HMGCS2-203ENST00000476640 CTAGE1Q96RT6 745 aa15.45■□□□□ 0.06
HMGCS2-203ENST00000476640 SPZ1Q9BXG8 430 aa15.45■□□□□ 0.06
HMGCS2-203ENST00000476640 SIP14410 1827 aa15.45■□□□□ 0.06
HMGCS2-203ENST00000476640 NOP56O00567 594 aaKnown RBP15.44■□□□□ 0.06
HMGCS2-203ENST00000476640 CYTH3O43739 400 aa15.44■□□□□ 0.06
HMGCS2-203ENST00000476640 CXCL10P02778 98 aa15.44■□□□□ 0.06
HMGCS2-203ENST00000476640 POU3F3P20264 500 aaPredicted RBP15.44■□□□□ 0.06
HMGCS2-203ENST00000476640 WDR5P61964 334 aaKnown RBP15.44■□□□□ 0.06
HMGCS2-203ENST00000476640 IKBKEQ14164 716 aa15.44■□□□□ 0.06
HMGCS2-203ENST00000476640 NEDD9Q14511 834 aa15.44■□□□□ 0.06
HMGCS2-203ENST00000476640 HSDL1Q3SXM5 330 aa15.44■□□□□ 0.06
HMGCS2-203ENST00000476640 XRRA1Q6P2D8 792 aa15.44■□□□□ 0.06
HMGCS2-203ENST00000476640 MB21D2Q8IYB1 491 aaPredicted RBP15.44■□□□□ 0.06
HMGCS2-203ENST00000476640 ZNF654Q8IZM8 581 aa15.44■□□□□ 0.06
HMGCS2-203ENST00000476640 MICALL1Q8N3F8 863 aa15.44■□□□□ 0.06
HMGCS2-203ENST00000476640 IL31RAQ8NI17 732 aa15.44■□□□□ 0.06
HMGCS2-203ENST00000476640 SMARCC2Q8TAQ2 1214 aa15.44■□□□□ 0.06
HMGCS2-203ENST00000476640 IGDCC4Q8TDY8 1250 aa15.44■□□□□ 0.06
HMGCS2-203ENST00000476640 DHX38Q92620 1227 aaKnown RBP15.44■□□□□ 0.06
HMGCS2-203ENST00000476640 USP26Q9BXU7 913 aa15.44■□□□□ 0.06
HMGCS2-203ENST00000476640 SENP2Q9HC62 589 aa15.44■□□□□ 0.06
HMGCS2-203ENST00000476640 PRDM6Q9NQX0 595 aa15.44■□□□□ 0.06
HMGCS2-203ENST00000476640 RBM8AQ9Y5S9 174 aaKnown RBP15.44■□□□□ 0.06
HMGCS2-203ENST00000476640 COL4A4P53420 1690 aaPredicted RBP15.44■□□□□ 0.06
HMGCS2-203ENST00000476640 BDP1A6H8Y1 2624 aa15.44■□□□□ 0.06
HMGCS2-203ENST00000476640 TCF20Q9UGU0 1960 aaKnown RBP15.44■□□□□ 0.06
HMGCS2-203ENST00000476640 FRMPD4Q14CM0 1322 aa15.43■□□□□ 0.06
HMGCS2-203ENST00000476640 TNFRSF10AO00220 468 aa15.43■□□□□ 0.06
HMGCS2-203ENST00000476640 FIBPO43427 364 aa15.43■□□□□ 0.06
HMGCS2-203ENST00000476640 CALM1P0DP23 149 aa15.43■□□□□ 0.06
HMGCS2-203ENST00000476640 CALM2P0DP24 149 aa15.43■□□□□ 0.06
HMGCS2-203ENST00000476640 CALM3P0DP25 149 aa15.43■□□□□ 0.06
HMGCS2-203ENST00000476640 MCM5P33992 734 aa15.43■□□□□ 0.06
HMGCS2-203ENST00000476640 TAP1Q03518 808 aa15.43■□□□□ 0.06
HMGCS2-203ENST00000476640 SKIV2LQ15477 1246 aaKnown RBP15.43■□□□□ 0.06
HMGCS2-203ENST00000476640 SLC35G1Q2M3R5 365 aa15.43■□□□□ 0.06
HMGCS2-203ENST00000476640 NFXL1Q6ZNB6 911 aa15.43■□□□□ 0.06
HMGCS2-203ENST00000476640 C17orf102A2RUQ5 167 aa15.42■□□□□ 0.06
HMGCS2-203ENST00000476640 CCDC69A6NI79 296 aa15.42■□□□□ 0.06
HMGCS2-203ENST00000476640 H3BRB1 525 aa15.42■□□□□ 0.06
HMGCS2-203ENST00000476640 PRC1O43663 620 aa15.42■□□□□ 0.06
HMGCS2-203ENST00000476640 SORBS3O60504 671 aa15.42■□□□□ 0.06
HMGCS2-203ENST00000476640 NBNO60934 754 aa15.42■□□□□ 0.06
HMGCS2-203ENST00000476640 GNAT1P11488 350 aa15.42■□□□□ 0.06
HMGCS2-203ENST00000476640 ICAM3P32942 547 aa15.42■□□□□ 0.06
HMGCS2-203ENST00000476640 ANTXR2P58335 489 aa15.42■□□□□ 0.06
HMGCS2-203ENST00000476640 SP2Q02086 613 aa15.42■□□□□ 0.06
HMGCS2-203ENST00000476640 ZNF618Q5T7W0 954 aa15.42■□□□□ 0.06
HMGCS2-203ENST00000476640 METTL7BQ6UX53 244 aa15.42■□□□□ 0.06
HMGCS2-203ENST00000476640 SERINC5Q86VE9 423 aa15.42■□□□□ 0.06
HMGCS2-203ENST00000476640 GIMAP8Q8ND71 665 aaPredicted RBP15.42■□□□□ 0.06
HMGCS2-203ENST00000476640 PIBF1Q8WXW3 757 aa15.42■□□□□ 0.06
HMGCS2-203ENST00000476640 ARNTL2Q8WYA1 636 aa15.42■□□□□ 0.06
HMGCS2-203ENST00000476640 ATP6V0A1Q93050 837 aa15.42■□□□□ 0.06
HMGCS2-203ENST00000476640 TMEM87BQ96K49 555 aa15.42■□□□□ 0.06
HMGCS2-203ENST00000476640 INPP4AQ96PE3 977 aaPredicted RBP15.42■□□□□ 0.06
HMGCS2-203ENST00000476640 C16orf70Q9BSU1 422 aa15.42■□□□□ 0.06
HMGCS2-203ENST00000476640 TUT1Q9H6E5 874 aaKnown RBP15.42■□□□□ 0.06
HMGCS2-203ENST00000476640 CERS4Q9HA82 394 aa15.42■□□□□ 0.06
HMGCS2-203ENST00000476640 LY9Q9HBG7 655 aa15.42■□□□□ 0.06
HMGCS2-203ENST00000476640 ZNF215Q9UL58 517 aaPredicted RBP15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms