RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 LCA5LO95447 670 aa9.27□□□□□ -0.93
VAPB-205ENST00000476395 HPDP32754 393 aaPredicted RBP9.27□□□□□ -0.93
VAPB-205ENST00000476395 DNA2P51530 1060 aa9.27□□□□□ -0.93
VAPB-205ENST00000476395 NLRP5P59047 1200 aa9.27□□□□□ -0.93
VAPB-205ENST00000476395 NNTQ13423 1086 aa9.27□□□□□ -0.93
VAPB-205ENST00000476395 TRIM14Q14142 442 aa9.27□□□□□ -0.93
VAPB-205ENST00000476395 TXNRD1Q16881 649 aa9.27□□□□□ -0.93
VAPB-205ENST00000476395 INF2Q27J81 1249 aa9.27□□□□□ -0.93
VAPB-205ENST00000476395 ASTE1Q2TB18 679 aaPredicted RBP9.27□□□□□ -0.93
VAPB-205ENST00000476395 CYB5D1Q6P9G0 228 aa9.27□□□□□ -0.93
VAPB-205ENST00000476395 GLIS3Q8NEA6 775 aa9.27□□□□□ -0.93
VAPB-205ENST00000476395 OR8K1Q8NGG5 319 aa9.27□□□□□ -0.93
VAPB-205ENST00000476395 ZNF483Q8TF39 744 aaPredicted RBP9.27□□□□□ -0.93
VAPB-205ENST00000476395 THOC1Q96FV9 657 aaKnown RBP9.27□□□□□ -0.93
VAPB-205ENST00000476395 OSBPL7Q9BZF2 842 aa9.27□□□□□ -0.93
VAPB-205ENST00000476395 TRIM9Q9C026 710 aa9.27□□□□□ -0.93
VAPB-205ENST00000476395 EEF1GP26641 437 aaKnown RBP9.26□□□□□ -0.93
VAPB-205ENST00000476395 HNRNPH3P31942 346 aaKnown RBP9.26□□□□□ -0.93
VAPB-205ENST00000476395 EHHADHQ08426 723 aa9.26□□□□□ -0.93
VAPB-205ENST00000476395 ZBTB10Q96DT7 871 aa9.26□□□□□ -0.93
VAPB-205ENST00000476395 NGLY1Q96IV0 654 aa9.26□□□□□ -0.93
VAPB-205ENST00000476395 CCT8L2Q96SF2 557 aa9.26□□□□□ -0.93
VAPB-205ENST00000476395 NHEJ1Q9H9Q4 299 aaPredicted RBP9.26□□□□□ -0.93
VAPB-205ENST00000476395 BLOC1S4Q9NUP1 217 aa9.26□□□□□ -0.93
VAPB-205ENST00000476395 THRAP3Q9Y2W1 955 aaKnown RBP9.26□□□□□ -0.93
VAPB-205ENST00000476395 BTAF1O14981 1849 aa9.26□□□□□ -0.93
VAPB-205ENST00000476395 ZNF233A6NK53 670 aa9.26□□□□□ -0.93
VAPB-205ENST00000476395 PES1O00541 588 aaKnown RBP9.26□□□□□ -0.93
VAPB-205ENST00000476395 TPD52L2O43399 206 aaKnown RBP9.26□□□□□ -0.93
VAPB-205ENST00000476395 XBP1P17861 261 aa9.26□□□□□ -0.93
VAPB-205ENST00000476395 PLCG1P19174 1290 aa9.26□□□□□ -0.93
VAPB-205ENST00000476395 NOVP48745 357 aa9.26□□□□□ -0.93
VAPB-205ENST00000476395 ARHGEF1Q92888 912 aaKnown RBP9.26□□□□□ -0.93
VAPB-205ENST00000476395 CCDC114Q96M63 670 aa9.26□□□□□ -0.93
VAPB-205ENST00000476395 BARHL2Q9NY43 387 aa9.26□□□□□ -0.93
VAPB-205ENST00000476395 FAM184BQ9ULE4 1060 aa9.26□□□□□ -0.93
VAPB-205ENST00000476395 E7EVH7 732 aa9.25□□□□□ -0.93
VAPB-205ENST00000476395 STAT6P42226 847 aa9.25□□□□□ -0.93
VAPB-205ENST00000476395 GUCY2FP51841 1108 aa9.25□□□□□ -0.93
VAPB-205ENST00000476395 C11orf91Q3C1V1 193 aa9.25□□□□□ -0.93
VAPB-205ENST00000476395 FILIP1LQ4L180 1135 aa9.25□□□□□ -0.93
VAPB-205ENST00000476395 COBLL1Q53SF7 1204 aa9.25□□□□□ -0.93
VAPB-205ENST00000476395 ZNF280DQ6N043 979 aa9.25□□□□□ -0.93
VAPB-205ENST00000476395 FUKQ8N0W3 1084 aa9.25□□□□□ -0.93
VAPB-205ENST00000476395 MYCBPAPQ8TBZ2 947 aa9.25□□□□□ -0.93
VAPB-205ENST00000476395 HAUS4Q9H6D7 363 aa9.25□□□□□ -0.93
VAPB-205ENST00000476395 ATP8A2Q9NTI2 1148 aa9.25□□□□□ -0.93
VAPB-205ENST00000476395 SIPA1L1O43166 1804 aa9.25□□□□□ -0.93
VAPB-205ENST00000476395 NCK2O43639 380 aa9.25□□□□□ -0.93
VAPB-205ENST00000476395 GCKP35557 465 aa9.25□□□□□ -0.93
VAPB-205ENST00000476395 SMTNP53814 917 aa9.25□□□□□ -0.93
VAPB-205ENST00000476395 PARP9Q8IXQ6 854 aa9.25□□□□□ -0.93
VAPB-205ENST00000476395 SH3RF3Q8TEJ3 882 aaPredicted RBP9.25□□□□□ -0.93
VAPB-205ENST00000476395 PNMA5Q96PV4 448 aa9.25□□□□□ -0.93
VAPB-205ENST00000476395 ERGIC2Q96RQ1 377 aa9.25□□□□□ -0.93
VAPB-205ENST00000476395 TUBGCP2Q9BSJ2 902 aa9.25□□□□□ -0.93
VAPB-205ENST00000476395 L3MBTL1Q9Y468 752 aa9.25□□□□□ -0.93
VAPB-205ENST00000476395 LY75O60449 1722 aa9.25□□□□□ -0.93
VAPB-205ENST00000476395 MARCH6O60337 910 aa9.25□□□□□ -0.93
VAPB-205ENST00000476395 SARNPP82979 210 aaKnown RBP9.25□□□□□ -0.93
VAPB-205ENST00000476395 CDK17Q00537 523 aa9.25□□□□□ -0.93
VAPB-205ENST00000476395 SPAG1Q07617 926 aa9.25□□□□□ -0.93
VAPB-205ENST00000476395 DDB1Q16531 1140 aa9.25□□□□□ -0.93
VAPB-205ENST00000476395 ECM1Q16610 540 aa9.25□□□□□ -0.93
VAPB-205ENST00000476395 HGSNATQ68CP4 663 aa9.25□□□□□ -0.93
VAPB-205ENST00000476395 DPY19L2P1Q6NXN4 242 aa9.25□□□□□ -0.93
VAPB-205ENST00000476395 TLDC1Q6P9B6 456 aa9.25□□□□□ -0.93
VAPB-205ENST00000476395 ANKRD23Q86SG2 305 aa9.25□□□□□ -0.93
VAPB-205ENST00000476395 PNMA1Q8ND90 353 aa9.25□□□□□ -0.93
VAPB-205ENST00000476395 TBC1D22AQ8WUA7 517 aa9.25□□□□□ -0.93
VAPB-205ENST00000476395 BAP1Q92560 729 aa9.25□□□□□ -0.93
VAPB-205ENST00000476395 STAMBPL1Q96FJ0 436 aa9.25□□□□□ -0.93
VAPB-205ENST00000476395 C7orf25Q9BPX7 421 aa9.25□□□□□ -0.93
VAPB-205ENST00000476395 ZMYND12Q9H0C1 365 aa9.25□□□□□ -0.93
VAPB-205ENST00000476395 ATF5Q9Y2D1 282 aaPredicted RBP9.25□□□□□ -0.93
VAPB-205ENST00000476395 ZNF646O15015 1829 aaPredicted RBP9.25□□□□□ -0.93
VAPB-205ENST00000476395 SPATA31A5Q5VU36 1347 aa9.25□□□□□ -0.93
VAPB-205ENST00000476395 SPATA31A7Q8IWB4 1347 aa9.25□□□□□ -0.93
VAPB-205ENST00000476395 TARSL2A2RTX5 802 aaKnown RBP9.24□□□□□ -0.93
VAPB-205ENST00000476395 IDEP14735 1019 aa9.24□□□□□ -0.93
VAPB-205ENST00000476395 TMOD1P28289 359 aa9.24□□□□□ -0.93
VAPB-205ENST00000476395 PRPHP41219 470 aa9.24□□□□□ -0.93
VAPB-205ENST00000476395 TFAP4Q01664 338 aa9.24□□□□□ -0.93
VAPB-205ENST00000476395 SNCBQ16143 134 aa9.24□□□□□ -0.93
VAPB-205ENST00000476395 NFRKBQ6P4R8 1299 aa9.24□□□□□ -0.93
VAPB-205ENST00000476395 NLRP14Q86W24 1093 aa9.24□□□□□ -0.93
VAPB-205ENST00000476395 DGKHQ86XP1 1220 aa9.24□□□□□ -0.93
VAPB-205ENST00000476395 CCDC125Q86Z20 511 aa9.24□□□□□ -0.93
VAPB-205ENST00000476395 OR2W6PQ8NHA6 318 aa9.24□□□□□ -0.93
VAPB-205ENST00000476395 SPDL1Q96EA4 605 aa9.24□□□□□ -0.93
VAPB-205ENST00000476395 CCDC43Q96MW1 224 aaKnown RBP9.24□□□□□ -0.93
VAPB-205ENST00000476395 NUDT12Q9BQG2 462 aa9.24□□□□□ -0.93
VAPB-205ENST00000476395 ARPP21Q9UBL0 812 aaPredicted RBP9.24□□□□□ -0.93
VAPB-205ENST00000476395 A0A1W2PQJ5 194 aa9.24□□□□□ -0.93
VAPB-205ENST00000476395 GOLGA8HP0CJ92 632 aa9.24□□□□□ -0.93
VAPB-205ENST00000476395 RASA1P20936 1047 aa9.24□□□□□ -0.93
VAPB-205ENST00000476395 GRB10Q13322 594 aa9.24□□□□□ -0.93
VAPB-205ENST00000476395 PTGISQ16647 500 aa9.24□□□□□ -0.93
VAPB-205ENST00000476395 FIGNQ5HY92 759 aa9.24□□□□□ -0.93
VAPB-205ENST00000476395 MFSD4BQ5TF39 518 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms