RNA–Protein interactions for RNA: ENST00000475818.5

HDAC11-217, Transcript of histone deacetylase 11, humanhuman

TSL 3

Gene HDAC11, Length 1,271 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-217ENST00000475818 COL20A1Q9P218 1284 aa23.78■■□□□ 1.4
HDAC11-217ENST00000475818 DDX41Q9UJV9 622 aaKnown RBP23.78■■□□□ 1.4
HDAC11-217ENST00000475818 SORBS3O60504 671 aa23.77■■□□□ 1.4
HDAC11-217ENST00000475818 HNRNPUQ00839 825 aaKnown RBP eCLIP23.77■■□□□ 1.4
HDAC11-217ENST00000475818 STXBP2Q15833 593 aa23.77■■□□□ 1.4
HDAC11-217ENST00000475818 SYTL5Q8TDW5 730 aaPredicted RBP23.77■■□□□ 1.4
HDAC11-217ENST00000475818 EDAQ92838 391 aa23.77■■□□□ 1.4
HDAC11-217ENST00000475818 TECTAO75443 2155 aa23.76■■□□□ 1.39
HDAC11-217ENST00000475818 MICAL3Q7RTP6 2002 aa23.76■■□□□ 1.39
HDAC11-217ENST00000475818 ORC4O43929 436 aa23.76■■□□□ 1.39
HDAC11-217ENST00000475818 CTNNB1P35222 781 aa23.76■■□□□ 1.39
HDAC11-217ENST00000475818 ZNF543Q08ER8 600 aa23.76■■□□□ 1.39
HDAC11-217ENST00000475818 HYAL1Q12794 435 aa23.76■■□□□ 1.39
HDAC11-217ENST00000475818 NSUN6Q8TEA1 469 aaKnown RBP23.76■■□□□ 1.39
HDAC11-217ENST00000475818 SEPT8Q92599 483 aa23.76■■□□□ 1.39
HDAC11-217ENST00000475818 TOP1MTQ969P6 601 aa23.76■■□□□ 1.39
HDAC11-217ENST00000475818 PBXIP1Q96AQ6 731 aa23.76■■□□□ 1.39
HDAC11-217ENST00000475818 IFIH1Q9BYX4 1025 aaKnown RBP23.76■■□□□ 1.39
HDAC11-217ENST00000475818 OSBPL7Q9BZF2 842 aa23.76■■□□□ 1.39
HDAC11-217ENST00000475818 CPVLQ9H3G5 476 aa23.76■■□□□ 1.39
HDAC11-217ENST00000475818 MYO7AQ13402 2215 aa23.75■■□□□ 1.39
HDAC11-217ENST00000475818 TMEM221A6NGB7 291 aa23.75■■□□□ 1.39
HDAC11-217ENST00000475818 M0R296 226 aa23.75■■□□□ 1.39
HDAC11-217ENST00000475818 STXBP3O00186 592 aa23.75■■□□□ 1.39
HDAC11-217ENST00000475818 NCK2O43639 380 aa23.75■■□□□ 1.39
HDAC11-217ENST00000475818 LAMC2Q13753 1193 aa23.75■■□□□ 1.39
HDAC11-217ENST00000475818 CTC1Q2NKJ3 1217 aa23.75■■□□□ 1.39
HDAC11-217ENST00000475818 SERINC5Q86VE9 423 aa23.75■■□□□ 1.39
HDAC11-217ENST00000475818 RGS22Q8NE09 1264 aa23.75■■□□□ 1.39
HDAC11-217ENST00000475818 PPTC7Q8NI37 304 aa23.75■■□□□ 1.39
HDAC11-217ENST00000475818 EMID1Q96A84 441 aaPredicted RBP23.75■■□□□ 1.39
HDAC11-217ENST00000475818 IGFLR1Q9H665 355 aa23.75■■□□□ 1.39
HDAC11-217ENST00000475818 FAM86C1Q9NVL1 165 aa23.75■■□□□ 1.39
HDAC11-217ENST00000475818 MRVI1Q9Y6F6 885 aa23.75■■□□□ 1.39
HDAC11-217ENST00000475818 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.74■■□□□ 1.39
HDAC11-217ENST00000475818 GRM6O15303 877 aa23.74■■□□□ 1.39
HDAC11-217ENST00000475818 CTSHP09668 335 aa23.74■■□□□ 1.39
HDAC11-217ENST00000475818 GOLGA8HP0CJ92 632 aa23.74■■□□□ 1.39
HDAC11-217ENST00000475818 EIF2AK2P19525 551 aaKnown RBP23.74■■□□□ 1.39
HDAC11-217ENST00000475818 GTF2F1P35269 517 aaKnown RBP eCLIP23.74■■□□□ 1.39
HDAC11-217ENST00000475818 TCF15Q12870 199 aa23.74■■□□□ 1.39
HDAC11-217ENST00000475818 SMAD4Q13485 552 aaKnown RBP23.74■■□□□ 1.39
HDAC11-217ENST00000475818 VPS53Q5VIR6 699 aa23.74■■□□□ 1.39
HDAC11-217ENST00000475818 RMDN3Q96TC7 470 aa23.74■■□□□ 1.39
HDAC11-217ENST00000475818 ANAPC4Q9UJX5 808 aa23.74■■□□□ 1.39
HDAC11-217ENST00000475818 LINC01565O15544 149 aa23.73■■□□□ 1.39
HDAC11-217ENST00000475818 TBX10O75333 385 aa23.73■■□□□ 1.39
HDAC11-217ENST00000475818 TRIM67Q6ZTA4 783 aa23.73■■□□□ 1.39
HDAC11-217ENST00000475818 BMP8AQ7Z5Y6 402 aa23.73■■□□□ 1.39
HDAC11-217ENST00000475818 SUGP1Q8IWZ8 645 aaKnown RBP23.73■■□□□ 1.39
HDAC11-217ENST00000475818 UBA5Q9GZZ9 404 aa23.73■■□□□ 1.39
HDAC11-217ENST00000475818 GFRA3O60609 400 aa23.72■■□□□ 1.39
HDAC11-217ENST00000475818 ARHGEF16Q5VV41 709 aa23.72■■□□□ 1.39
HDAC11-217ENST00000475818 FIBCD1Q8N539 461 aa23.72■■□□□ 1.39
HDAC11-217ENST00000475818 IWS1Q96ST2 819 aa23.72■■□□□ 1.39
HDAC11-217ENST00000475818 CHMP4BQ9H444 224 aaKnown RBP23.72■■□□□ 1.39
HDAC11-217ENST00000475818 CD207Q9UJ71 328 aa23.72■■□□□ 1.39
HDAC11-217ENST00000475818 ATP6V0A1Q93050 837 aa23.71■■□□□ 1.39
HDAC11-217ENST00000475818 IL17RAQ96F46 866 aa23.71■■□□□ 1.39
HDAC11-217ENST00000475818 COL4A6Q14031 1691 aa23.7■■□□□ 1.39
HDAC11-217ENST00000475818 ABCB11O95342 1321 aa23.7■■□□□ 1.38
HDAC11-217ENST00000475818 C17orf102A2RUQ5 167 aa23.7■■□□□ 1.38
HDAC11-217ENST00000475818 EIF3JO75822 258 aaKnown RBP23.7■■□□□ 1.38
HDAC11-217ENST00000475818 FGRP09769 529 aa23.7■■□□□ 1.38
HDAC11-217ENST00000475818 SNHG28P0DPA3 235 aa23.7■■□□□ 1.38
HDAC11-217ENST00000475818 CDC37Q16543 378 aaPredicted RBP23.7■■□□□ 1.38
HDAC11-217ENST00000475818 SPATA33Q96N06 139 aa23.7■■□□□ 1.38
HDAC11-217ENST00000475818 PRRX2Q99811 253 aa23.7■■□□□ 1.38
HDAC11-217ENST00000475818 C11orf84Q9BUA3 381 aaPredicted RBP23.7■■□□□ 1.38
HDAC11-217ENST00000475818 TCP11L1Q9NUJ3 509 aa23.7■■□□□ 1.38
HDAC11-217ENST00000475818 NLRC5Q86WI3 1866 aa23.69■■□□□ 1.38
HDAC11-217ENST00000475818 HOXD8P13378 290 aaPredicted RBP23.69■■□□□ 1.38
HDAC11-217ENST00000475818 BMPR1AP36894 532 aa23.69■■□□□ 1.38
HDAC11-217ENST00000475818 HSDL1Q3SXM5 330 aa23.69■■□□□ 1.38
HDAC11-217ENST00000475818 LMAN2LQ9H0V9 348 aa23.69■■□□□ 1.38
HDAC11-217ENST00000475818 C5orf67F2Z3F1 127 aa23.68■■□□□ 1.38
HDAC11-217ENST00000475818 TREHO43280 583 aa23.68■■□□□ 1.38
HDAC11-217ENST00000475818 PPFIA4O75335 1185 aa23.68■■□□□ 1.38
HDAC11-217ENST00000475818 NR3C2P08235 984 aa23.68■■□□□ 1.38
HDAC11-217ENST00000475818 NDUFV1P49821 464 aa23.68■■□□□ 1.38
HDAC11-217ENST00000475818 MYSM1Q5VVJ2 828 aa23.68■■□□□ 1.38
HDAC11-217ENST00000475818 MCF2L2Q86YR7 1114 aa23.68■■□□□ 1.38
HDAC11-217ENST00000475818 PI4K2BQ8TCG2 481 aa23.68■■□□□ 1.38
HDAC11-217ENST00000475818 GGPS1O95749 300 aa23.67■■□□□ 1.38
HDAC11-217ENST00000475818 RB1P06400 928 aa23.67■■□□□ 1.38
HDAC11-217ENST00000475818 ZXDAP98168 799 aa23.67■■□□□ 1.38
HDAC11-217ENST00000475818 FBXL6Q8N531 539 aa23.67■■□□□ 1.38
HDAC11-217ENST00000475818 OTUD7AQ8TE49 926 aaPredicted RBP23.67■■□□□ 1.38
HDAC11-217ENST00000475818 C16orf70Q9BSU1 422 aa23.67■■□□□ 1.38
HDAC11-217ENST00000475818 PXMP2Q9NR77 195 aa23.67■■□□□ 1.38
HDAC11-217ENST00000475818 USP34Q70CQ2 3546 aa23.67■■□□□ 1.38
HDAC11-217ENST00000475818 ATG2AQ2TAZ0 1938 aa23.67■■□□□ 1.38
HDAC11-217ENST00000475818 KIAA1217Q5T5P2 1943 aa23.67■■□□□ 1.38
HDAC11-217ENST00000475818 TTC41PQ6P2S7 1318 aa23.66■■□□□ 1.38
HDAC11-217ENST00000475818 LINC00271P0C7V0 271 aa23.66■■□□□ 1.38
HDAC11-217ENST00000475818 SMIM10L2AP0DMW4 78 aa23.66■■□□□ 1.38
HDAC11-217ENST00000475818 SMIM10L2BP0DMW5 78 aa23.66■■□□□ 1.38
HDAC11-217ENST00000475818 MYCLP12524 364 aaPredicted RBP23.66■■□□□ 1.38
HDAC11-217ENST00000475818 ADAM15Q13444 863 aa23.66■■□□□ 1.38
HDAC11-217ENST00000475818 PKN1Q16512 942 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms