RNA–Protein interactions for RNA: ENST00000475728.5

ABCF3-211, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 503 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-211ENST00000475728 TMEM63BQ5T3F8 832 aa16.52■□□□□ 0.24
ABCF3-211ENST00000475728 GALNT17Q6IS24 598 aa16.52■□□□□ 0.24
ABCF3-211ENST00000475728 CXCL17Q6UXB2 119 aa16.52■□□□□ 0.24
ABCF3-211ENST00000475728 GIMAP8Q8ND71 665 aaPredicted RBP16.52■□□□□ 0.24
ABCF3-211ENST00000475728 COPS5Q92905 334 aa16.52■□□□□ 0.24
ABCF3-211ENST00000475728 GTF3C6Q969F1 213 aa16.52■□□□□ 0.24
ABCF3-211ENST00000475728 GPRASP2Q96D09 838 aa16.52■□□□□ 0.24
ABCF3-211ENST00000475728 ZSCAN31Q96LW9 406 aaPredicted RBP16.52■□□□□ 0.24
ABCF3-211ENST00000475728 TOX2Q96NM4 488 aa16.52■□□□□ 0.24
ABCF3-211ENST00000475728 MTG1Q9BT17 334 aaPredicted RBP16.52■□□□□ 0.24
ABCF3-211ENST00000475728 ANO3Q9BYT9 981 aa16.52■□□□□ 0.24
ABCF3-211ENST00000475728 COL6A3P12111 3177 aa16.51■□□□□ 0.23
ABCF3-211ENST00000475728 A0A0C4DFX4 3053 aa16.51■□□□□ 0.23
ABCF3-211ENST00000475728 SPATA31C2B4DYI2 1134 aa16.51■□□□□ 0.23
ABCF3-211ENST00000475728 ARVCFO00192 962 aa16.51■□□□□ 0.23
ABCF3-211ENST00000475728 MYL3P08590 195 aa16.51■□□□□ 0.23
ABCF3-211ENST00000475728 SREBF1P36956 1147 aa16.51■□□□□ 0.23
ABCF3-211ENST00000475728 CLK2P49760 499 aaKnown RBP16.51■□□□□ 0.23
ABCF3-211ENST00000475728 IRX5P78411 483 aaPredicted RBP16.51■□□□□ 0.23
ABCF3-211ENST00000475728 DGKDQ16760 1214 aa16.51■□□□□ 0.23
ABCF3-211ENST00000475728 ME3Q16798 604 aa16.51■□□□□ 0.23
ABCF3-211ENST00000475728 TRIM60Q495X7 471 aa16.51■□□□□ 0.23
ABCF3-211ENST00000475728 CELF3Q5SZQ8 465 aaKnown RBP16.51■□□□□ 0.23
ABCF3-211ENST00000475728 ANKRD33Q7Z3H0 272 aa16.51■□□□□ 0.23
ABCF3-211ENST00000475728 PPTC7Q8NI37 304 aa16.51■□□□□ 0.23
ABCF3-211ENST00000475728 AFG1LQ8WV93 481 aa16.51■□□□□ 0.23
ABCF3-211ENST00000475728 SENP7Q9BQF6 1050 aa16.51■□□□□ 0.23
ABCF3-211ENST00000475728 MLXIPQ9HAP2 919 aa16.51■□□□□ 0.23
ABCF3-211ENST00000475728 RTEL1Q9NZ71 1219 aa16.51■□□□□ 0.23
ABCF3-211ENST00000475728 VPS54Q9P1Q0 977 aa16.51■□□□□ 0.23
ABCF3-211ENST00000475728 TLR3O15455 904 aaKnown RBP16.5■□□□□ 0.23
ABCF3-211ENST00000475728 ST18O60284 1047 aa16.5■□□□□ 0.23
ABCF3-211ENST00000475728 PPFIA3O75145 1194 aa16.5■□□□□ 0.23
ABCF3-211ENST00000475728 GGPS1O95749 300 aa16.5■□□□□ 0.23
ABCF3-211ENST00000475728 UBA1P22314 1058 aaKnown RBP16.5■□□□□ 0.23
ABCF3-211ENST00000475728 TLE2Q04725 743 aa16.5■□□□□ 0.23
ABCF3-211ENST00000475728 MYSM1Q5VVJ2 828 aa16.5■□□□□ 0.23
ABCF3-211ENST00000475728 KIF2CQ99661 725 aa16.5■□□□□ 0.23
ABCF3-211ENST00000475728 SH2B1Q9NRF2 756 aaPredicted RBP16.5■□□□□ 0.23
ABCF3-211ENST00000475728 UBIAD1Q9Y5Z9 338 aa16.5■□□□□ 0.23
ABCF3-211ENST00000475728 RANBP2P49792 3224 aaKnown RBP16.5■□□□□ 0.23
ABCF3-211ENST00000475728 PQBP1O60828 265 aaKnown RBP16.49■□□□□ 0.23
ABCF3-211ENST00000475728 PPFIA4O75335 1185 aa16.49■□□□□ 0.23
ABCF3-211ENST00000475728 MMP3P08254 477 aa16.49■□□□□ 0.23
ABCF3-211ENST00000475728 PTGS1P23219 599 aa16.49■□□□□ 0.23
ABCF3-211ENST00000475728 CDK7P50613 346 aa16.49■□□□□ 0.23
ABCF3-211ENST00000475728 ARHGAP4P98171 946 aa16.49■□□□□ 0.23
ABCF3-211ENST00000475728 PURAQ00577 322 aaKnown RBP16.49■□□□□ 0.23
ABCF3-211ENST00000475728 MTMR1Q13613 665 aa16.49■□□□□ 0.23
ABCF3-211ENST00000475728 ITGA7Q13683 1181 aa16.49■□□□□ 0.23
ABCF3-211ENST00000475728 JAKMIP3Q5VZ66 844 aa16.49■□□□□ 0.23
ABCF3-211ENST00000475728 METTL7BQ6UX53 244 aa16.49■□□□□ 0.23
ABCF3-211ENST00000475728 NECAB1Q8N987 351 aa16.49■□□□□ 0.23
ABCF3-211ENST00000475728 SPATA33Q96N06 139 aa16.49■□□□□ 0.23
ABCF3-211ENST00000475728 JADE2Q9NQC1 790 aa16.49■□□□□ 0.23
ABCF3-211ENST00000475728 ORC3Q9UBD5 711 aaPredicted RBP16.49■□□□□ 0.23
ABCF3-211ENST00000475728 ZMYND8Q9ULU4 1186 aaPredicted RBP16.49■□□□□ 0.23
ABCF3-211ENST00000475728 CUL9Q8IWT3 2517 aa16.48■□□□□ 0.23
ABCF3-211ENST00000475728 NOP56O00567 594 aaKnown RBP16.48■□□□□ 0.23
ABCF3-211ENST00000475728 CLTBP09497 229 aa16.48■□□□□ 0.23
ABCF3-211ENST00000475728 ITGB5P18084 799 aa16.48■□□□□ 0.23
ABCF3-211ENST00000475728 ZNF76P36508 570 aa16.48■□□□□ 0.23
ABCF3-211ENST00000475728 CEP55Q53EZ4 464 aa16.48■□□□□ 0.23
ABCF3-211ENST00000475728 NIPA1Q7RTP0 329 aa16.48■□□□□ 0.23
ABCF3-211ENST00000475728 SLC43A3Q8NBI5 491 aa16.48■□□□□ 0.23
ABCF3-211ENST00000475728 DAGLBQ8NCG7 672 aa16.48■□□□□ 0.23
ABCF3-211ENST00000475728 ZFP91Q96JP5 570 aaPredicted RBP16.48■□□□□ 0.23
ABCF3-211ENST00000475728 TBC1D32Q96NH3 1257 aa16.48■□□□□ 0.23
ABCF3-211ENST00000475728 LBHD1Q9BQE6 289 aaPredicted RBP16.48■□□□□ 0.23
ABCF3-211ENST00000475728 MXRA8Q9BRK3 442 aa16.48■□□□□ 0.23
ABCF3-211ENST00000475728 KATNAL1Q9BW62 490 aa16.48■□□□□ 0.23
ABCF3-211ENST00000475728 TMEM260Q9NX78 707 aa16.48■□□□□ 0.23
ABCF3-211ENST00000475728 PCDHA4Q9UN74 947 aa16.48■□□□□ 0.23
ABCF3-211ENST00000475728 KIAA1217Q5T5P2 1943 aa16.47■□□□□ 0.23
ABCF3-211ENST00000475728 CYP3A4P08684 503 aa16.47■□□□□ 0.23
ABCF3-211ENST00000475728 HOXD8P13378 290 aaPredicted RBP16.47■□□□□ 0.23
ABCF3-211ENST00000475728 SP2Q02086 613 aa16.47■□□□□ 0.23
ABCF3-211ENST00000475728 SEMA3FQ13275 785 aa16.47■□□□□ 0.23
ABCF3-211ENST00000475728 BLIDQ8IZY5 108 aa16.47■□□□□ 0.23
ABCF3-211ENST00000475728 PGBD1Q96JS3 809 aa16.47■□□□□ 0.23
ABCF3-211ENST00000475728 LLPHQ9BRT6 129 aaKnown RBP16.47■□□□□ 0.23
ABCF3-211ENST00000475728 PRDM5Q9NQX1 630 aaPredicted RBP16.47■□□□□ 0.23
ABCF3-211ENST00000475728 LARGE1O95461 756 aa16.46■□□□□ 0.23
ABCF3-211ENST00000475728 CTDNEP1O95476 244 aa16.46■□□□□ 0.23
ABCF3-211ENST00000475728 SUPT20HL2P0C7V6 817 aa16.46■□□□□ 0.23
ABCF3-211ENST00000475728 SYN1P17600 705 aa16.46■□□□□ 0.23
ABCF3-211ENST00000475728 MCM2P49736 904 aa16.46■□□□□ 0.23
ABCF3-211ENST00000475728 PTPN11Q06124 597 aaPredicted RBP16.46■□□□□ 0.23
ABCF3-211ENST00000475728 NFRKBQ6P4R8 1299 aa16.46■□□□□ 0.23
ABCF3-211ENST00000475728 CYFIP1Q7L576 1253 aa16.46■□□□□ 0.23
ABCF3-211ENST00000475728 NSUN7Q8NE18 718 aaKnown RBP16.46■□□□□ 0.23
ABCF3-211ENST00000475728 ALG1Q9BT22 464 aa16.46■□□□□ 0.23
ABCF3-211ENST00000475728 BACH2Q9BYV9 841 aa16.46■□□□□ 0.23
ABCF3-211ENST00000475728 BRMS1Q9HCU9 246 aa16.46■□□□□ 0.23
ABCF3-211ENST00000475728 PDLIM7Q9NR12 457 aa16.46■□□□□ 0.23
ABCF3-211ENST00000475728 TMEM39AQ9NV64 488 aa16.46■□□□□ 0.23
ABCF3-211ENST00000475728 MEIS1O00470 390 aa16.45■□□□□ 0.22
ABCF3-211ENST00000475728 KIAA0355O15063 1070 aa16.45■□□□□ 0.22
ABCF3-211ENST00000475728 PSMC6P62333 389 aa16.45■□□□□ 0.22
ABCF3-211ENST00000475728 SETQ01105 290 aaPredicted RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms