RNA–Protein interactions for RNA: ENST00000475401.1

TM9SF3-204, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 2

Gene TM9SF3, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-204ENST00000475401 TRIM48Q8IWZ4 208 aa8.13□□□□□ -1.11
TM9SF3-204ENST00000475401 PCDH19Q8TAB3 1148 aa8.13□□□□□ -1.11
TM9SF3-204ENST00000475401 DDX11Q96FC9 970 aa8.13□□□□□ -1.11
TM9SF3-204ENST00000475401 CDIP1Q9H305 208 aa8.13□□□□□ -1.11
TM9SF3-204ENST00000475401 SMOC1Q9H4F8 434 aa8.13□□□□□ -1.11
TM9SF3-204ENST00000475401 TRIM39Q9HCM9 518 aa8.13□□□□□ -1.11
TM9SF3-204ENST00000475401 MAGEC2Q9UBF1 373 aaPredicted RBP8.13□□□□□ -1.11
TM9SF3-204ENST00000475401 ZNF652Q9Y2D9 606 aa8.13□□□□□ -1.11
TM9SF3-204ENST00000475401 PCDHB4Q9Y5E5 795 aa8.13□□□□□ -1.11
TM9SF3-204ENST00000475401 MYOCOSA0A1B0GUC4 107 aa8.12□□□□□ -1.11
TM9SF3-204ENST00000475401 SGSM2O43147 1006 aa8.12□□□□□ -1.11
TM9SF3-204ENST00000475401 ASLP04424 464 aa8.12□□□□□ -1.11
TM9SF3-204ENST00000475401 COL6A2P12110 1019 aa8.12□□□□□ -1.11
TM9SF3-204ENST00000475401 IGFALSP35858 605 aa8.12□□□□□ -1.11
TM9SF3-204ENST00000475401 DNM2P50570 870 aa8.12□□□□□ -1.11
TM9SF3-204ENST00000475401 PLEKHG4Q58EX7 1191 aa8.12□□□□□ -1.11
TM9SF3-204ENST00000475401 EMC4Q5J8M3 183 aa8.12□□□□□ -1.11
TM9SF3-204ENST00000475401 C16orf59Q7L2K0 433 aa8.12□□□□□ -1.11
TM9SF3-204ENST00000475401 DDX53Q86TM3 631 aaKnown RBP8.12□□□□□ -1.11
TM9SF3-204ENST00000475401 NLGN1Q8N2Q7 840 aa8.12□□□□□ -1.11
TM9SF3-204ENST00000475401 POU5F2Q8N7G0 328 aa8.12□□□□□ -1.11
TM9SF3-204ENST00000475401 PIP4K2CQ8TBX8 421 aa8.12□□□□□ -1.11
TM9SF3-204ENST00000475401 FMNL2Q96PY5 1086 aa8.12□□□□□ -1.11
TM9SF3-204ENST00000475401 KCNK12Q9HB15 430 aa8.12□□□□□ -1.11
TM9SF3-204ENST00000475401 MYOTQ9UBF9 498 aa8.12□□□□□ -1.11
TM9SF3-204ENST00000475401 FAN1Q9Y2M0 1017 aa8.12□□□□□ -1.11
TM9SF3-204ENST00000475401 HCFC2Q9Y5Z7 792 aa8.12□□□□□ -1.11
TM9SF3-204ENST00000475401 TCRBV16S1A1N1A0A5B0 115 aa8.11□□□□□ -1.11
TM9SF3-204ENST00000475401 WNT9AO14904 365 aa8.11□□□□□ -1.11
TM9SF3-204ENST00000475401 SMARCA5O60264 1052 aaPredicted RBP8.11□□□□□ -1.11
TM9SF3-204ENST00000475401 NPTXRO95502 500 aa8.11□□□□□ -1.11
TM9SF3-204ENST00000475401 NCAM1P13591 858 aa8.11□□□□□ -1.11
TM9SF3-204ENST00000475401 DLG4P78352 724 aa8.11□□□□□ -1.11
TM9SF3-204ENST00000475401 MESP2Q0VG99 397 aa8.11□□□□□ -1.11
TM9SF3-204ENST00000475401 TKFCQ3LXA3 575 aa8.11□□□□□ -1.11
TM9SF3-204ENST00000475401 UBE2R2Q712K3 238 aaPredicted RBP8.11□□□□□ -1.11
TM9SF3-204ENST00000475401 KIAA0907Q7Z7F0 614 aaPredicted RBP8.11□□□□□ -1.11
TM9SF3-204ENST00000475401 LDHDQ86WU2 507 aa8.11□□□□□ -1.11
TM9SF3-204ENST00000475401 MZB1Q8WU39 189 aa8.11□□□□□ -1.11
TM9SF3-204ENST00000475401 NINJ1Q92982 152 aa8.11□□□□□ -1.11
TM9SF3-204ENST00000475401 SCLYQ96I15 445 aa8.11□□□□□ -1.11
TM9SF3-204ENST00000475401 CLUHP3Q96NS8 147 aa8.11□□□□□ -1.11
TM9SF3-204ENST00000475401 RNF38Q9H0F5 515 aa8.11□□□□□ -1.11
TM9SF3-204ENST00000475401 INTS7Q9NVH2 962 aaKnown RBP8.11□□□□□ -1.11
TM9SF3-204ENST00000475401 MBD1Q9UIS9 605 aaPredicted RBP8.11□□□□□ -1.11
TM9SF3-204ENST00000475401 DSEQ9UL01 958 aa8.11□□□□□ -1.11
TM9SF3-204ENST00000475401 CCDC66A2RUB6 948 aa8.1□□□□□ -1.11
TM9SF3-204ENST00000475401 TCAF2A6NFQ2 919 aa8.1□□□□□ -1.11
TM9SF3-204ENST00000475401 PYGMP11217 842 aa8.1□□□□□ -1.11
TM9SF3-204ENST00000475401 GLDCP23378 1020 aa8.1□□□□□ -1.11
TM9SF3-204ENST00000475401 GPR19Q15760 415 aa8.1□□□□□ -1.11
TM9SF3-204ENST00000475401 C21orf62-AS1Q17RA5 79 aa8.1□□□□□ -1.11
TM9SF3-204ENST00000475401 ETV3LQ6ZN32 361 aa8.1□□□□□ -1.11
TM9SF3-204ENST00000475401 FGD2Q7Z6J4 655 aa8.1□□□□□ -1.11
TM9SF3-204ENST00000475401 ZC3H18Q86VM9 953 aaKnown RBP8.1□□□□□ -1.11
TM9SF3-204ENST00000475401 AMIGO3Q86WK7 504 aa8.1□□□□□ -1.11
TM9SF3-204ENST00000475401 NIM1KQ8IY84 436 aa8.1□□□□□ -1.11
TM9SF3-204ENST00000475401 NLGN4XQ8N0W4 816 aa8.1□□□□□ -1.11
TM9SF3-204ENST00000475401 BHLHE22Q8NFJ8 381 aaPredicted RBP8.1□□□□□ -1.11
TM9SF3-204ENST00000475401 CNTD2Q9H8S5 307 aa8.1□□□□□ -1.11
TM9SF3-204ENST00000475401 NGRNQ9NPE2 291 aaKnown RBP8.1□□□□□ -1.11
TM9SF3-204ENST00000475401 ETV2O00321 342 aaPredicted RBP8.09□□□□□ -1.11
TM9SF3-204ENST00000475401 N4BP3O15049 544 aa8.09□□□□□ -1.11
TM9SF3-204ENST00000475401 TADA3O75528 432 aa8.09□□□□□ -1.11
TM9SF3-204ENST00000475401 ZNF648Q5T619 568 aaPredicted RBP8.09□□□□□ -1.11
TM9SF3-204ENST00000475401 ARHGAP36Q6ZRI8 547 aa8.09□□□□□ -1.11
TM9SF3-204ENST00000475401 SGPP1Q9BX95 441 aa8.09□□□□□ -1.11
TM9SF3-204ENST00000475401 CELF4Q9BZC1 486 aaKnown RBP8.09□□□□□ -1.11
TM9SF3-204ENST00000475401 TNPO3Q9Y5L0 923 aaKnown RBP8.09□□□□□ -1.11
TM9SF3-204ENST00000475401 ASGR2P07307 311 aa8.08□□□□□ -1.12
TM9SF3-204ENST00000475401 PDE6AP16499 860 aa8.08□□□□□ -1.12
TM9SF3-204ENST00000475401 KRT15P19012 456 aa8.08□□□□□ -1.12
TM9SF3-204ENST00000475401 PMLP29590 882 aa8.08□□□□□ -1.12
TM9SF3-204ENST00000475401 RAP1GAPP47736 663 aa8.08□□□□□ -1.12
TM9SF3-204ENST00000475401 CDR1P51861 262 aa8.08□□□□□ -1.12
TM9SF3-204ENST00000475401 ATG14Q6ZNE5 492 aa8.08□□□□□ -1.12
TM9SF3-204ENST00000475401 DHX37Q8IY37 1157 aaKnown RBP8.08□□□□□ -1.12
TM9SF3-204ENST00000475401 UHMK1Q8TAS1 419 aaKnown RBP8.08□□□□□ -1.12
TM9SF3-204ENST00000475401 MFSD3Q96ES6 412 aa8.08□□□□□ -1.12
TM9SF3-204ENST00000475401 BCAS3Q9H6U6 928 aa8.08□□□□□ -1.12
TM9SF3-204ENST00000475401 COQ6Q9Y2Z9 468 aa8.08□□□□□ -1.12
TM9SF3-204ENST00000475401 IRAK3Q9Y616 596 aa8.08□□□□□ -1.12
TM9SF3-204ENST00000475401 TCRBV5S2A0A599 114 aa8.07□□□□□ -1.12
TM9SF3-204ENST00000475401 SLC27A2O14975 620 aa8.07□□□□□ -1.12
TM9SF3-204ENST00000475401 NKRFO15226 690 aaKnown RBP eCLIP8.07□□□□□ -1.12
TM9SF3-204ENST00000475401 DNAJC8O75937 253 aaPredicted RBP8.07□□□□□ -1.12
TM9SF3-204ENST00000475401 NCKAP1LP55160 1127 aa8.07□□□□□ -1.12
TM9SF3-204ENST00000475401 ZCCHC8Q6NZY4 707 aaKnown RBP8.07□□□□□ -1.12
TM9SF3-204ENST00000475401 IGSF22Q8N9C0 903 aa8.07□□□□□ -1.12
TM9SF3-204ENST00000475401 CPA5Q8WXQ8 436 aa8.07□□□□□ -1.12
TM9SF3-204ENST00000475401 SIGLEC10Q96LC7 697 aa8.07□□□□□ -1.12
TM9SF3-204ENST00000475401 CABP5Q9NP86 173 aa8.07□□□□□ -1.12
TM9SF3-204ENST00000475401 SAMD15Q9P1V8 674 aa8.07□□□□□ -1.12
TM9SF3-204ENST00000475401 ASH2LQ9UBL3 628 aa8.07□□□□□ -1.12
TM9SF3-204ENST00000475401 PCDHA5Q9Y5H7 936 aa8.07□□□□□ -1.12
TM9SF3-204ENST00000475401 RFXAPO00287 272 aa8.06□□□□□ -1.12
TM9SF3-204ENST00000475401 IRS4O14654 1257 aaPredicted RBP8.06□□□□□ -1.12
TM9SF3-204ENST00000475401 BUB1BO60566 1050 aaPredicted RBP8.06□□□□□ -1.12
TM9SF3-204ENST00000475401 TSPAN15O95858 294 aa8.06□□□□□ -1.12
TM9SF3-204ENST00000475401 MED14OSP0DP75 135 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms