RNA–Protein interactions for RNA: ENST00000475375.1

VPS36-203, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-203ENST00000475375 MYOCDQ8IZQ8 938 aa23.85■■□□□ 1.41
VPS36-203ENST00000475375 C17orf80Q9BSJ5 609 aa23.85■■□□□ 1.41
VPS36-203ENST00000475375 C11orf16Q9NQ32 467 aa23.85■■□□□ 1.41
VPS36-203ENST00000475375 PI4K2BG5E9Z4 385 aa23.84■■□□□ 1.41
VPS36-203ENST00000475375 HAS3O00219 553 aa23.84■■□□□ 1.41
VPS36-203ENST00000475375 THPOP40225 353 aa23.84■■□□□ 1.41
VPS36-203ENST00000475375 MBTPS1Q14703 1052 aa23.84■■□□□ 1.41
VPS36-203ENST00000475375 LEXMQ3ZCV2 418 aa23.84■■□□□ 1.41
VPS36-203ENST00000475375 TRAF7Q6Q0C0 670 aa23.84■■□□□ 1.41
VPS36-203ENST00000475375 SPATA33Q96N06 139 aa23.84■■□□□ 1.41
VPS36-203ENST00000475375 ZSCAN10Q96SZ4 725 aaPredicted RBP23.84■■□□□ 1.41
VPS36-203ENST00000475375 JMJD4Q9H9V9 463 aa23.84■■□□□ 1.41
VPS36-203ENST00000475375 KIAA1217Q5T5P2 1943 aa23.84■■□□□ 1.41
VPS36-203ENST00000475375 EMSYQ7Z589 1322 aa23.84■■□□□ 1.41
VPS36-203ENST00000475375 B4E1Z4 1266 aa23.83■■□□□ 1.41
VPS36-203ENST00000475375 GJD3Q8N144 294 aa23.83■■□□□ 1.41
VPS36-203ENST00000475375 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.82■■□□□ 1.4
VPS36-203ENST00000475375 RSPH10B2B2RC85 870 aa23.82■■□□□ 1.4
VPS36-203ENST00000475375 PPFIA4O75335 1185 aa23.82■■□□□ 1.4
VPS36-203ENST00000475375 RSPH10BP0C881 870 aa23.82■■□□□ 1.4
VPS36-203ENST00000475375 FAM178BQ8IXR5 827 aa23.82■■□□□ 1.4
VPS36-203ENST00000475375 ENAHQ8N8S7 591 aaPredicted RBP23.82■■□□□ 1.4
VPS36-203ENST00000475375 DBF4BQ8NFT6 615 aa23.82■■□□□ 1.4
VPS36-203ENST00000475375 AMNQ9BXJ7 453 aa23.82■■□□□ 1.4
VPS36-203ENST00000475375 GGPS1O95749 300 aa23.81■■□□□ 1.4
VPS36-203ENST00000475375 SDSP20132 328 aa23.81■■□□□ 1.4
VPS36-203ENST00000475375 NT5C2P49902 561 aa23.81■■□□□ 1.4
VPS36-203ENST00000475375 PTPROQ16827 1216 aa23.81■■□□□ 1.4
VPS36-203ENST00000475375 CELF3Q5SZQ8 465 aaKnown RBP23.81■■□□□ 1.4
VPS36-203ENST00000475375 MYSM1Q5VVJ2 828 aa23.81■■□□□ 1.4
VPS36-203ENST00000475375 PTCRAQ6ISU1 281 aaPredicted RBP23.81■■□□□ 1.4
VPS36-203ENST00000475375 KCNV1Q6PIU1 500 aa23.81■■□□□ 1.4
VPS36-203ENST00000475375 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.81■■□□□ 1.4
VPS36-203ENST00000475375 LNPKQ9C0E8 428 aa23.81■■□□□ 1.4
VPS36-203ENST00000475375 CTNNA3Q9UI47 895 aa23.81■■□□□ 1.4
VPS36-203ENST00000475375 SIP14410 1827 aa23.81■■□□□ 1.4
VPS36-203ENST00000475375 IL9P15248 144 aa23.8■■□□□ 1.4
VPS36-203ENST00000475375 HSD17B4P51659 736 aa23.8■■□□□ 1.4
VPS36-203ENST00000475375 HIC1Q14526 733 aa23.8■■□□□ 1.4
VPS36-203ENST00000475375 HSDL1Q3SXM5 330 aa23.8■■□□□ 1.4
VPS36-203ENST00000475375 EP400NLQ6ZTU2 488 aa23.8■■□□□ 1.4
VPS36-203ENST00000475375 SERINC5Q86VE9 423 aa23.8■■□□□ 1.4
VPS36-203ENST00000475375 ANKS1AQ92625 1134 aa23.8■■□□□ 1.4
VPS36-203ENST00000475375 MRPL38Q96DV4 380 aaKnown RBP23.8■■□□□ 1.4
VPS36-203ENST00000475375 UIMC1Q96RL1 719 aa23.8■■□□□ 1.4
VPS36-203ENST00000475375 YME1L1Q96TA2 773 aa23.8■■□□□ 1.4
VPS36-203ENST00000475375 PDCD2LQ9BRP1 358 aa23.8■■□□□ 1.4
VPS36-203ENST00000475375 UBAC1Q9BSL1 405 aa23.8■■□□□ 1.4
VPS36-203ENST00000475375 C17orf102A2RUQ5 167 aa23.79■■□□□ 1.4
VPS36-203ENST00000475375 HOXD8P13378 290 aaPredicted RBP23.79■■□□□ 1.4
VPS36-203ENST00000475375 HOXA13P31271 388 aaPredicted RBP23.79■■□□□ 1.4
VPS36-203ENST00000475375 ATP6V0A1Q93050 837 aa23.79■■□□□ 1.4
VPS36-203ENST00000475375 MLXIPQ9HAP2 919 aa23.79■■□□□ 1.4
VPS36-203ENST00000475375 DIAPH3Q9NSV4 1193 aa23.79■■□□□ 1.4
VPS36-203ENST00000475375 ZSWIM5Q9P217 1185 aa23.79■■□□□ 1.4
VPS36-203ENST00000475375 MYH6P13533 1939 aa23.78■■□□□ 1.4
VPS36-203ENST00000475375 RGS20O76081 388 aa23.78■■□□□ 1.4
VPS36-203ENST00000475375 UPP2O95045 317 aa23.78■■□□□ 1.4
VPS36-203ENST00000475375 HTRA4P83105 476 aaPredicted RBP23.78■■□□□ 1.4
VPS36-203ENST00000475375 EPC2Q52LR7 807 aa23.78■■□□□ 1.4
VPS36-203ENST00000475375 CWC27Q6UX04 472 aaKnown RBP23.78■■□□□ 1.4
VPS36-203ENST00000475375 PCDHA1Q9Y5I3 950 aa23.78■■□□□ 1.4
VPS36-203ENST00000475375 MYH7BA7E2Y1 1941 aa23.78■■□□□ 1.4
VPS36-203ENST00000475375 MUC6Q6W4X9 2439 aa23.77■■□□□ 1.4
VPS36-203ENST00000475375 PRR33A8MZF0 331 aa23.77■■□□□ 1.4
VPS36-203ENST00000475375 H3BQ06 376 aaPredicted RBP23.77■■□□□ 1.4
VPS36-203ENST00000475375 OPLAHO14841 1288 aa23.77■■□□□ 1.4
VPS36-203ENST00000475375 UBA1P22314 1058 aaKnown RBP23.77■■□□□ 1.4
VPS36-203ENST00000475375 HDAC1Q13547 482 aaPredicted RBP23.77■■□□□ 1.4
VPS36-203ENST00000475375 PGM5Q15124 567 aa23.77■■□□□ 1.4
VPS36-203ENST00000475375 IMMTQ16891 758 aaKnown RBP23.77■■□□□ 1.4
VPS36-203ENST00000475375 TIGD5Q53EQ6 642 aa23.77■■□□□ 1.4
VPS36-203ENST00000475375 PLEKHG4Q58EX7 1191 aa23.77■■□□□ 1.4
VPS36-203ENST00000475375 IFIT1BQ5T764 474 aaKnown RBP23.77■■□□□ 1.4
VPS36-203ENST00000475375 STAG2Q8N3U4 1231 aa23.77■■□□□ 1.4
VPS36-203ENST00000475375 SEPT8Q92599 483 aa23.77■■□□□ 1.4
VPS36-203ENST00000475375 ZFP91Q96JP5 570 aaPredicted RBP23.77■■□□□ 1.4
VPS36-203ENST00000475375 SAMD11Q96NU1 681 aa23.77■■□□□ 1.4
VPS36-203ENST00000475375 KRT23Q9C075 422 aa23.77■■□□□ 1.4
VPS36-203ENST00000475375 KLRF2D3W0D1 207 aa23.76■■□□□ 1.39
VPS36-203ENST00000475375 CTSHP09668 335 aa23.76■■□□□ 1.39
VPS36-203ENST00000475375 CCND2P30279 289 aa23.76■■□□□ 1.39
VPS36-203ENST00000475375 RRP1P56182 461 aaKnown RBP23.76■■□□□ 1.39
VPS36-203ENST00000475375 SP2Q02086 613 aa23.76■■□□□ 1.39
VPS36-203ENST00000475375 GPM6BQ13491 265 aa23.76■■□□□ 1.39
VPS36-203ENST00000475375 CSPP1Q1MSJ5 1256 aa23.76■■□□□ 1.39
VPS36-203ENST00000475375 PUS10Q3MIT2 529 aaKnown RBP23.76■■□□□ 1.39
VPS36-203ENST00000475375 STOX1Q6ZVD7 989 aa23.76■■□□□ 1.39
VPS36-203ENST00000475375 VSIG10LQ86VR7 867 aa23.76■■□□□ 1.39
VPS36-203ENST00000475375 IL31RAQ8NI17 732 aa23.76■■□□□ 1.39
VPS36-203ENST00000475375 SP7Q8TDD2 431 aaPredicted RBP23.76■■□□□ 1.39
VPS36-203ENST00000475375 C16orf70Q9BSU1 422 aa23.76■■□□□ 1.39
VPS36-203ENST00000475375 MAP3K20Q9NYL2 800 aaKnown RBP23.76■■□□□ 1.39
VPS36-203ENST00000475375 GRXCR2A6NFK2 248 aa23.75■■□□□ 1.39
VPS36-203ENST00000475375 H3BRB1 525 aa23.75■■□□□ 1.39
VPS36-203ENST00000475375 NOP56O00567 594 aaKnown RBP23.75■■□□□ 1.39
VPS36-203ENST00000475375 ZBTB5O15062 677 aa23.75■■□□□ 1.39
VPS36-203ENST00000475375 SMIM10L2AP0DMW4 78 aa23.75■■□□□ 1.39
VPS36-203ENST00000475375 SMIM10L2BP0DMW5 78 aa23.75■■□□□ 1.39
VPS36-203ENST00000475375 TGFB3P10600 412 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms