RNA–Protein interactions for RNA: ENST00000475255.5

SEMA4D-217, Transcript of semaphorin 4D, humanhuman

TSL 1 (best)

Gene SEMA4D, Length 3,053 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-217ENST00000475255 KCNK3O14649 394 aa15.12■□□□□ 0.01
SEMA4D-217ENST00000475255 TDP2O95551 362 aa15.12■□□□□ 0.01
SEMA4D-217ENST00000475255 FLT3P36888 993 aa15.12■□□□□ 0.01
SEMA4D-217ENST00000475255 HSPA2P54652 639 aa15.12■□□□□ 0.01
SEMA4D-217ENST00000475255 FIGNQ5HY92 759 aa15.12■□□□□ 0.01
SEMA4D-217ENST00000475255 B4GALNT4Q76KP1 1039 aa15.12■□□□□ 0.01
SEMA4D-217ENST00000475255 CEP57Q86XR8 500 aa15.12■□□□□ 0.01
SEMA4D-217ENST00000475255 CNPY4Q8N129 248 aa15.12■□□□□ 0.01
SEMA4D-217ENST00000475255 CALML4Q96GE6 196 aa15.12■□□□□ 0.01
SEMA4D-217ENST00000475255 CDK5RAP3Q96JB5 506 aa15.12■□□□□ 0.01
SEMA4D-217ENST00000475255 TMEM47Q9BQJ4 181 aa15.12■□□□□ 0.01
SEMA4D-217ENST00000475255 EPN3Q9H201 632 aa15.12■□□□□ 0.01
SEMA4D-217ENST00000475255 GDF3Q9NR23 364 aa15.12■□□□□ 0.01
SEMA4D-217ENST00000475255 CACNA1SQ13698 1873 aa15.12■□□□□ 0.01
SEMA4D-217ENST00000475255 DCDC2CA8MYV0 355 aa15.11■□□□□ 0.01
SEMA4D-217ENST00000475255 SLC37A4O43826 429 aa15.11■□□□□ 0.01
SEMA4D-217ENST00000475255 HNRNPH3P31942 346 aaKnown RBP15.11■□□□□ 0.01
SEMA4D-217ENST00000475255 ERVK-9P63128 1117 aa15.11■□□□□ 0.01
SEMA4D-217ENST00000475255 NONOQ15233 471 aaKnown RBP eCLIP15.11■□□□□ 0.01
SEMA4D-217ENST00000475255 GRIK5Q16478 980 aa15.11■□□□□ 0.01
SEMA4D-217ENST00000475255 QPCTQ16769 361 aa15.11■□□□□ 0.01
SEMA4D-217ENST00000475255 ASTE1Q2TB18 679 aaPredicted RBP15.11■□□□□ 0.01
SEMA4D-217ENST00000475255 PRPF38AQ8NAV1 312 aaKnown RBP15.11■□□□□ 0.01
SEMA4D-217ENST00000475255 FAM212AQ96EL1 285 aa15.11■□□□□ 0.01
SEMA4D-217ENST00000475255 PNMA5Q96PV4 448 aa15.11■□□□□ 0.01
SEMA4D-217ENST00000475255 PRLRP16471 622 aa15.11■□□□□ 0.01
SEMA4D-217ENST00000475255 FAM83BQ5T0W9 1011 aa15.11■□□□□ 0.01
SEMA4D-217ENST00000475255 ZNF572Q7Z3I7 529 aaPredicted RBP15.11■□□□□ 0.01
SEMA4D-217ENST00000475255 SH3RF3Q8TEJ3 882 aaPredicted RBP15.11■□□□□ 0.01
SEMA4D-217ENST00000475255 CABS1Q96KC9 395 aa15.11■□□□□ 0.01
SEMA4D-217ENST00000475255 ATP6V1G3Q96LB4 118 aa15.11■□□□□ 0.01
SEMA4D-217ENST00000475255 GPR101Q96P66 508 aaPredicted RBP15.11■□□□□ 0.01
SEMA4D-217ENST00000475255 CEP89Q96ST8 783 aa15.11■□□□□ 0.01
SEMA4D-217ENST00000475255 TRIM31Q9BZY9 425 aa15.11■□□□□ 0.01
SEMA4D-217ENST00000475255 NEUROG2Q9H2A3 272 aa15.11■□□□□ 0.01
SEMA4D-217ENST00000475255 ZHX3Q9H4I2 956 aa15.11■□□□□ 0.01
SEMA4D-217ENST00000475255 PLCH1Q4KWH8 1693 aa15.11■□□□□ 0.01
SEMA4D-217ENST00000475255 ACTN1P12814 892 aa15.11■□□□□ 0.01
SEMA4D-217ENST00000475255 MDH1P40925 334 aaKnown RBP15.11■□□□□ 0.01
SEMA4D-217ENST00000475255 GRM4Q14833 912 aa15.11■□□□□ 0.01
SEMA4D-217ENST00000475255 KDM7AQ6ZMT4 941 aa15.11■□□□□ 0.01
SEMA4D-217ENST00000475255 LRRC55Q6ZSA7 311 aa15.11■□□□□ 0.01
SEMA4D-217ENST00000475255 DZIP1Q86YF9 867 aaKnown RBP15.11■□□□□ 0.01
SEMA4D-217ENST00000475255 MAPKAPK5Q8IW41 473 aa15.11■□□□□ 0.01
SEMA4D-217ENST00000475255 TGFBRAP1Q8WUH2 860 aa15.11■□□□□ 0.01
SEMA4D-217ENST00000475255 DDX12PQ92771 950 aa15.11■□□□□ 0.01
SEMA4D-217ENST00000475255 PIGSQ96S52 555 aa15.11■□□□□ 0.01
SEMA4D-217ENST00000475255 CCDC87Q9NVE4 849 aa15.11■□□□□ 0.01
SEMA4D-217ENST00000475255 NPHP3-ACAD11A0A0J9YXS1 232 aa15.1■□□□□ 0.01
SEMA4D-217ENST00000475255 CEP104O60308 925 aa15.1■□□□□ 0.01
SEMA4D-217ENST00000475255 NOL4O94818 638 aa15.1■□□□□ 0.01
SEMA4D-217ENST00000475255 ODF2Q5BJF6 829 aa15.1■□□□□ 0.01
SEMA4D-217ENST00000475255 SFMBT2Q5VUG0 894 aa15.1■□□□□ 0.01
SEMA4D-217ENST00000475255 NEK8Q86SG6 692 aa15.1■□□□□ 0.01
SEMA4D-217ENST00000475255 COA7Q96BR5 231 aa15.1■□□□□ 0.01
SEMA4D-217ENST00000475255 DDX47Q9H0S4 455 aaKnown RBP15.1■□□□□ 0.01
SEMA4D-217ENST00000475255 CXorf56Q9H5V9 222 aa15.1■□□□□ 0.01
SEMA4D-217ENST00000475255 FRMPD2Q68DX3 1309 aaPredicted RBP15.1■□□□□ 0.01
SEMA4D-217ENST00000475255 ITIH3Q06033 890 aa15.1■□□□□ 0.01
SEMA4D-217ENST00000475255 ITPK1Q13572 414 aa15.1■□□□□ 0.01
SEMA4D-217ENST00000475255 ECM1Q16610 540 aa15.1■□□□□ 0.01
SEMA4D-217ENST00000475255 CCDC13Q8IYE1 715 aa15.1■□□□□ 0.01
SEMA4D-217ENST00000475255 SHANK3Q9BYB0 1731 aa15.1■□□□□ 0.01
SEMA4D-217ENST00000475255 FRMD3A2A2Y4 597 aa15.09■□□□□ 0.01
SEMA4D-217ENST00000475255 AMPD3Q01432 767 aa15.09■□□□□ 0.01
SEMA4D-217ENST00000475255 SLC9C1Q4G0N8 1177 aa15.09■□□□□ 0.01
SEMA4D-217ENST00000475255 SWT1Q5T5J6 900 aaKnown RBP15.09■□□□□ 0.01
SEMA4D-217ENST00000475255 CCDC84Q86UT8 332 aaPredicted RBP15.09■□□□□ 0.01
SEMA4D-217ENST00000475255 SNX29Q8TEQ0 813 aa15.09■□□□□ 0.01
SEMA4D-217ENST00000475255 UBLCP1Q8WVY7 318 aaPredicted RBP15.09■□□□□ 0.01
SEMA4D-217ENST00000475255 LARP4BQ92615 738 aaKnown RBP15.09■□□□□ 0.01
SEMA4D-217ENST00000475255 BCL9O00512 1426 aa15.09■□□□□ 0.01
SEMA4D-217ENST00000475255 GRID2IPA4D2P6 1211 aa15.09■□□□□ 0.01
SEMA4D-217ENST00000475255 LCA5LO95447 670 aa15.09■□□□□ 0.01
SEMA4D-217ENST00000475255 MYL1P05976 194 aa15.09■□□□□ 0.01
SEMA4D-217ENST00000475255 PDHBP11177 359 aa15.09■□□□□ 0.01
SEMA4D-217ENST00000475255 RDXP35241 583 aaKnown RBP15.09■□□□□ 0.01
SEMA4D-217ENST00000475255 HSD17B3P37058 310 aa15.09■□□□□ 0.01
SEMA4D-217ENST00000475255 EIF6P56537 245 aaKnown RBP15.09■□□□□ 0.01
SEMA4D-217ENST00000475255 ITGB3BPQ13352 177 aaPredicted RBP15.09■□□□□ 0.01
SEMA4D-217ENST00000475255 ADAT2Q7Z6V5 191 aaKnown RBP15.09■□□□□ 0.01
SEMA4D-217ENST00000475255 ZNF444Q8N0Y2 327 aaPredicted RBP15.09■□□□□ 0.01
SEMA4D-217ENST00000475255 INPP4AQ96PE3 977 aaPredicted RBP15.09■□□□□ 0.01
SEMA4D-217ENST00000475255 ARPP21Q9UBL0 812 aaPredicted RBP15.09■□□□□ 0.01
SEMA4D-217ENST00000475255 ITGA4P13612 1032 aa15.08■□□□□ 0.01
SEMA4D-217ENST00000475255 UBE4AQ14139 1066 aa15.08■□□□□ 0.01
SEMA4D-217ENST00000475255 UAP1Q16222 522 aaPredicted RBP15.08■□□□□ 0.01
SEMA4D-217ENST00000475255 CLEC10AQ8IUN9 316 aa15.08■□□□□ 0.01
SEMA4D-217ENST00000475255 LRP5O75197 1615 aa15.08■□□□□ 0
SEMA4D-217ENST00000475255 GOLGB1Q14789 3259 aaKnown RBP15.08■□□□□ 0
SEMA4D-217ENST00000475255 TMCO5BA8MYB1 307 aa15.08■□□□□ 0
SEMA4D-217ENST00000475255 PJA2O43164 708 aa15.08■□□□□ 0
SEMA4D-217ENST00000475255 KLHL30Q0D2K2 578 aa15.08■□□□□ 0
SEMA4D-217ENST00000475255 CALCRLQ16602 461 aa15.08■□□□□ 0
SEMA4D-217ENST00000475255 CYFIP2Q96F07 1278 aa15.08■□□□□ 0
SEMA4D-217ENST00000475255 SCLT1Q96NL6 688 aa15.08■□□□□ 0
SEMA4D-217ENST00000475255 CELF4Q9BZC1 486 aaKnown RBP15.08■□□□□ 0
SEMA4D-217ENST00000475255 DPH5Q9H2P9 285 aa15.08■□□□□ 0
SEMA4D-217ENST00000475255 SH3GLB2Q9NR46 395 aa15.08■□□□□ 0
SEMA4D-217ENST00000475255 ATP8A2Q9NTI2 1148 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms