RNA–Protein interactions for RNA: ENST00000475208.5

TMEM54-205, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best)

Gene TMEM54, Length 768 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-205ENST00000475208 LCHNA4D1U4 455 aa28.94■■■□□ 2.22
TMEM54-205ENST00000475208 SORBS3O60504 671 aa28.94■■■□□ 2.22
TMEM54-205ENST00000475208 RGS20O76081 388 aa28.94■■■□□ 2.22
TMEM54-205ENST00000475208 HOXA13P31271 388 aaPredicted RBP28.94■■■□□ 2.22
TMEM54-205ENST00000475208 GRB10Q13322 594 aa28.94■■■□□ 2.22
TMEM54-205ENST00000475208 ZBED2Q9BTP6 218 aa28.94■■■□□ 2.22
TMEM54-205ENST00000475208 MAP3K20Q9NYL2 800 aaKnown RBP28.94■■■□□ 2.22
TMEM54-205ENST00000475208 BDP1A6H8Y1 2624 aa28.93■■■□□ 2.22
TMEM54-205ENST00000475208 PALM3A6NDB9 673 aaPredicted RBP28.93■■■□□ 2.22
TMEM54-205ENST00000475208 HOXD8P13378 290 aaPredicted RBP28.93■■■□□ 2.22
TMEM54-205ENST00000475208 TCTN1Q2MV58 587 aa28.93■■■□□ 2.22
TMEM54-205ENST00000475208 STOX1Q6ZVD7 989 aa28.93■■■□□ 2.22
TMEM54-205ENST00000475208 HOMER1Q86YM7 354 aa28.93■■■□□ 2.22
TMEM54-205ENST00000475208 IL31RAQ8NI17 732 aa28.93■■■□□ 2.22
TMEM54-205ENST00000475208 WNT8BQ93098 351 aa28.93■■■□□ 2.22
TMEM54-205ENST00000475208 MYH7BA7E2Y1 1941 aa28.92■■■□□ 2.22
TMEM54-205ENST00000475208 GGPS1O95749 300 aa28.92■■■□□ 2.22
TMEM54-205ENST00000475208 ZNF200P98182 395 aaPredicted RBP28.92■■■□□ 2.22
TMEM54-205ENST00000475208 PGM5Q15124 567 aa28.92■■■□□ 2.22
TMEM54-205ENST00000475208 TRIM71Q2Q1W2 868 aaKnown RBP28.92■■■□□ 2.22
TMEM54-205ENST00000475208 CELF3Q5SZQ8 465 aaKnown RBP28.92■■■□□ 2.22
TMEM54-205ENST00000475208 MYSM1Q5VVJ2 828 aa28.92■■■□□ 2.22
TMEM54-205ENST00000475208 KCNV1Q6PIU1 500 aa28.92■■■□□ 2.22
TMEM54-205ENST00000475208 TRAF7Q6Q0C0 670 aa28.92■■■□□ 2.22
TMEM54-205ENST00000475208 VSIG10LQ86VR7 867 aa28.92■■■□□ 2.22
TMEM54-205ENST00000475208 SPATA33Q96N06 139 aa28.92■■■□□ 2.22
TMEM54-205ENST00000475208 COG5Q9UP83 839 aa28.92■■■□□ 2.22
TMEM54-205ENST00000475208 ABHD14A-ACY1A0A1B0GW23 586 aa28.91■■■□□ 2.22
TMEM54-205ENST00000475208 LPXNO60711 386 aa28.91■■■□□ 2.22
TMEM54-205ENST00000475208 SLC35G1Q2M3R5 365 aa28.91■■■□□ 2.22
TMEM54-205ENST00000475208 HSDL1Q3SXM5 330 aa28.91■■■□□ 2.22
TMEM54-205ENST00000475208 ZNF618Q5T7W0 954 aa28.91■■■□□ 2.22
TMEM54-205ENST00000475208 SAMD3Q8N6K7 520 aa28.91■■■□□ 2.22
TMEM54-205ENST00000475208 RBAK-RBAKDNI3L0D1 243 aa28.9■■■□□ 2.22
TMEM54-205ENST00000475208 PPFIA4O75335 1185 aa28.9■■■□□ 2.22
TMEM54-205ENST00000475208 UBA1P22314 1058 aaKnown RBP28.9■■■□□ 2.22
TMEM54-205ENST00000475208 TRDNQ13061 729 aa28.9■■■□□ 2.22
TMEM54-205ENST00000475208 GRM4Q14833 912 aa28.9■■■□□ 2.22
TMEM54-205ENST00000475208 EFCAB14O75071 495 aa28.89■■■□□ 2.22
TMEM54-205ENST00000475208 GJB5O95377 273 aa28.89■■■□□ 2.22
TMEM54-205ENST00000475208 CCND2P30279 289 aa28.89■■■□□ 2.22
TMEM54-205ENST00000475208 SP2Q02086 613 aa28.89■■■□□ 2.22
TMEM54-205ENST00000475208 HIC1Q14526 733 aa28.89■■■□□ 2.22
TMEM54-205ENST00000475208 MBTPS1Q14703 1052 aa28.89■■■□□ 2.22
TMEM54-205ENST00000475208 GDPD5Q8WTR4 605 aa28.89■■■□□ 2.22
TMEM54-205ENST00000475208 ZFP91Q96JP5 570 aaPredicted RBP28.89■■■□□ 2.22
TMEM54-205ENST00000475208 YTHDC1Q96MU7 727 aaKnown RBP28.89■■■□□ 2.22
TMEM54-205ENST00000475208 PIGSQ96S52 555 aa28.89■■■□□ 2.22
TMEM54-205ENST00000475208 GCOM1H8Y6P7 765 aaPredicted RBP28.88■■■□□ 2.21
TMEM54-205ENST00000475208 POLR2MP0CAP2 368 aa28.88■■■□□ 2.21
TMEM54-205ENST00000475208 GSPT1P15170 499 aaKnown RBP28.88■■■□□ 2.21
TMEM54-205ENST00000475208 TRAF1Q13077 416 aa28.88■■■□□ 2.21
TMEM54-205ENST00000475208 IKBKEQ14164 716 aa28.88■■■□□ 2.21
TMEM54-205ENST00000475208 FCHSD1Q86WN1 690 aa28.88■■■□□ 2.21
TMEM54-205ENST00000475208 GPKOWQ92917 476 aaPredicted RBP eCLIP28.88■■■□□ 2.21
TMEM54-205ENST00000475208 RAD9AQ99638 391 aa28.88■■■□□ 2.21
TMEM54-205ENST00000475208 RIOX1Q9H6W3 641 aa28.88■■■□□ 2.21
TMEM54-205ENST00000475208 TGFB3P10600 412 aa28.87■■■□□ 2.21
TMEM54-205ENST00000475208 C16orf70Q9BSU1 422 aa28.87■■■□□ 2.21
TMEM54-205ENST00000475208 MTUS1Q9ULD2 1270 aa28.87■■■□□ 2.21
TMEM54-205ENST00000475208 IFIT3O14879 490 aaKnown RBP28.86■■■□□ 2.21
TMEM54-205ENST00000475208 LGR5O75473 907 aa28.86■■■□□ 2.21
TMEM54-205ENST00000475208 CYP21A2P08686 494 aa28.86■■■□□ 2.21
TMEM54-205ENST00000475208 TTC22Q5TAA0 569 aa28.86■■■□□ 2.21
TMEM54-205ENST00000475208 FAM117BQ6P1L5 589 aa28.86■■■□□ 2.21
TMEM54-205ENST00000475208 HLA-CQ95604 372 aa28.86■■■□□ 2.21
TMEM54-205ENST00000475208 MLXIPQ9HAP2 919 aa28.86■■■□□ 2.21
TMEM54-205ENST00000475208 SENP2Q9HC62 589 aa28.86■■■□□ 2.21
TMEM54-205ENST00000475208 RAPGEFL1Q9UHV5 662 aa28.86■■■□□ 2.21
TMEM54-205ENST00000475208 CYTH3O43739 400 aa28.85■■■□□ 2.21
TMEM54-205ENST00000475208 PDE4AP27815 886 aa28.85■■■□□ 2.21
TMEM54-205ENST00000475208 SERINC5Q86VE9 423 aa28.85■■■□□ 2.21
TMEM54-205ENST00000475208 U3KPZ7 1027 aaPredicted RBP28.85■■■□□ 2.21
TMEM54-205ENST00000475208 ERICH2A1L162 156 aa28.84■■■□□ 2.21
TMEM54-205ENST00000475208 LINC01553A4QN01 128 aa28.84■■■□□ 2.21
TMEM54-205ENST00000475208 THPOP40225 353 aa28.84■■■□□ 2.21
TMEM54-205ENST00000475208 ERVK-21P61565 698 aa28.84■■■□□ 2.21
TMEM54-205ENST00000475208 PTH1RQ03431 593 aa28.84■■■□□ 2.21
TMEM54-205ENST00000475208 TGS1Q96RS0 853 aaKnown RBP28.84■■■□□ 2.21
TMEM54-205ENST00000475208 LMCD1Q9NZU5 365 aa28.84■■■□□ 2.21
TMEM54-205ENST00000475208 EMSYQ7Z589 1322 aa28.84■■■□□ 2.21
TMEM54-205ENST00000475208 BAZ2BQ9UIF8 2168 aaKnown RBP28.84■■■□□ 2.21
TMEM54-205ENST00000475208 PNMA6FA0A0J9YX94 578 aa28.83■■■□□ 2.21
TMEM54-205ENST00000475208 C17orf102A2RUQ5 167 aa28.83■■■□□ 2.21
TMEM54-205ENST00000475208 WTAPQ15007 396 aa28.83■■■□□ 2.21
TMEM54-205ENST00000475208 LIN28BQ6ZN17 250 aaKnown RBP eCLIP28.83■■■□□ 2.21
TMEM54-205ENST00000475208 RALYLQ86SE5 291 aaKnown RBP28.83■■■□□ 2.21
TMEM54-205ENST00000475208 SUGCTQ9HAC7 445 aa28.83■■■□□ 2.21
TMEM54-205ENST00000475208 RSPH10B2B2RC85 870 aa28.82■■■□□ 2.2
TMEM54-205ENST00000475208 H3BRB1 525 aa28.82■■■□□ 2.2
TMEM54-205ENST00000475208 LGALS2P05162 132 aa28.82■■■□□ 2.2
TMEM54-205ENST00000475208 RSPH10BP0C881 870 aa28.82■■■□□ 2.2
TMEM54-205ENST00000475208 TROAPQ12815 778 aa28.82■■■□□ 2.2
TMEM54-205ENST00000475208 GNPTABQ3T906 1256 aa28.82■■■□□ 2.2
TMEM54-205ENST00000475208 DBF4BQ8NFT6 615 aa28.82■■■□□ 2.2
TMEM54-205ENST00000475208 RUFY2Q8WXA3 655 aa28.82■■■□□ 2.2
TMEM54-205ENST00000475208 ATP6V0A1Q93050 837 aa28.82■■■□□ 2.2
TMEM54-205ENST00000475208 TUT1Q9H6E5 874 aaKnown RBP28.82■■■□□ 2.2
TMEM54-205ENST00000475208 BCAS3Q9H6U6 928 aa28.82■■■□□ 2.2
TMEM54-205ENST00000475208 TAF6LQ9Y6J9 622 aa28.82■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms