RNA–Protein interactions for RNA: ENST00000475184.5

ITGB1-211, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-211ENST00000475184 COL4A6Q14031 1691 aa18.6■□□□□ 0.57
ITGB1-211ENST00000475184 SALL3Q9BXA9 1300 aa18.59■□□□□ 0.57
ITGB1-211ENST00000475184 A0A0D9SFI3 127 aa18.59■□□□□ 0.57
ITGB1-211ENST00000475184 DCXO43602 365 aa18.59■□□□□ 0.57
ITGB1-211ENST00000475184 EIF3JO75822 258 aaKnown RBP18.59■□□□□ 0.57
ITGB1-211ENST00000475184 PCP11498 1178 aaKnown RBP18.59■□□□□ 0.57
ITGB1-211ENST00000475184 EIF2AK2P19525 551 aaKnown RBP18.59■□□□□ 0.57
ITGB1-211ENST00000475184 MRE11P49959 708 aa18.59■□□□□ 0.57
ITGB1-211ENST00000475184 EPC2Q52LR7 807 aa18.59■□□□□ 0.57
ITGB1-211ENST00000475184 ARHGEF16Q5VV41 709 aa18.59■□□□□ 0.57
ITGB1-211ENST00000475184 MFSD6Q6ZSS7 791 aa18.59■□□□□ 0.57
ITGB1-211ENST00000475184 DHX37Q8IY37 1157 aaKnown RBP18.59■□□□□ 0.57
ITGB1-211ENST00000475184 DBF4BQ8NFT6 615 aa18.59■□□□□ 0.57
ITGB1-211ENST00000475184 FAM227BQ96M60 508 aa18.59■□□□□ 0.57
ITGB1-211ENST00000475184 SAMD11Q96NU1 681 aa18.59■□□□□ 0.57
ITGB1-211ENST00000475184 DOCK5Q9H7D0 1870 aa18.58■□□□□ 0.57
ITGB1-211ENST00000475184 HSPD1P10809 573 aaKnown RBP18.58■□□□□ 0.56
ITGB1-211ENST00000475184 HOXD8P13378 290 aaPredicted RBP18.58■□□□□ 0.56
ITGB1-211ENST00000475184 HIC1Q14526 733 aa18.58■□□□□ 0.56
ITGB1-211ENST00000475184 MCMDC2Q4G0Z9 681 aa18.58■□□□□ 0.56
ITGB1-211ENST00000475184 BANK1Q8NDB2 785 aa18.58■□□□□ 0.56
ITGB1-211ENST00000475184 FAM50BQ9Y247 325 aa18.58■□□□□ 0.56
ITGB1-211ENST00000475184 TECTAO75443 2155 aa18.57■□□□□ 0.56
ITGB1-211ENST00000475184 RSPH10B2B2RC85 870 aa18.57■□□□□ 0.56
ITGB1-211ENST00000475184 NR3C2P08235 984 aa18.57■□□□□ 0.56
ITGB1-211ENST00000475184 RSPH10BP0C881 870 aa18.57■□□□□ 0.56
ITGB1-211ENST00000475184 THPOP40225 353 aa18.57■□□□□ 0.56
ITGB1-211ENST00000475184 NHLH1Q02575 133 aa18.57■□□□□ 0.56
ITGB1-211ENST00000475184 PLEKHG4Q58EX7 1191 aa18.57■□□□□ 0.56
ITGB1-211ENST00000475184 SERINC5Q86VE9 423 aa18.57■□□□□ 0.56
ITGB1-211ENST00000475184 TBC1D10CQ8IV04 446 aa18.57■□□□□ 0.56
ITGB1-211ENST00000475184 ADGRF4Q8IZF3 695 aa18.57■□□□□ 0.56
ITGB1-211ENST00000475184 PABPC5Q96DU9 382 aaKnown RBP18.57■□□□□ 0.56
ITGB1-211ENST00000475184 YME1L1Q96TA2 773 aa18.57■□□□□ 0.56
ITGB1-211ENST00000475184 ZKSCAN3Q9BRR0 538 aa18.57■□□□□ 0.56
ITGB1-211ENST00000475184 PXMP2Q9NR77 195 aa18.57■□□□□ 0.56
ITGB1-211ENST00000475184 MRPL11Q9Y3B7 192 aaKnown RBP18.57■□□□□ 0.56
ITGB1-211ENST00000475184 BAZ2BQ9UIF8 2168 aaKnown RBP18.57■□□□□ 0.56
ITGB1-211ENST00000475184 POTEB3A0JP26 581 aa18.56■□□□□ 0.56
ITGB1-211ENST00000475184 H3BNC9 293 aa18.56■□□□□ 0.56
ITGB1-211ENST00000475184 PPFIA4O75335 1185 aa18.56■□□□□ 0.56
ITGB1-211ENST00000475184 ZP2Q05996 745 aa18.56■□□□□ 0.56
ITGB1-211ENST00000475184 GPM6BQ13491 265 aa18.56■□□□□ 0.56
ITGB1-211ENST00000475184 COL19A1Q14993 1142 aa18.56■□□□□ 0.56
ITGB1-211ENST00000475184 QRICH1Q2TAL8 776 aa18.56■□□□□ 0.56
ITGB1-211ENST00000475184 TCEAL5Q5H9L2 206 aa18.56■□□□□ 0.56
ITGB1-211ENST00000475184 POTEBQ6S5H4 581 aa18.56■□□□□ 0.56
ITGB1-211ENST00000475184 EP400NLQ6ZTU2 488 aa18.56■□□□□ 0.56
ITGB1-211ENST00000475184 ZNF589Q86UQ0 364 aaPredicted RBP18.56■□□□□ 0.56
ITGB1-211ENST00000475184 DGKHQ86XP1 1220 aa18.56■□□□□ 0.56
ITGB1-211ENST00000475184 PNMA1Q8ND90 353 aa18.56■□□□□ 0.56
ITGB1-211ENST00000475184 ESR2Q92731 530 aa18.56■□□□□ 0.56
ITGB1-211ENST00000475184 KCNH6Q9H252 994 aa18.56■□□□□ 0.56
ITGB1-211ENST00000475184 RNF41Q9H4P4 317 aaPredicted RBP18.56■□□□□ 0.56
ITGB1-211ENST00000475184 PRKAG3Q9UGI9 489 aa18.56■□□□□ 0.56
ITGB1-211ENST00000475184 PCDHB15Q9Y5E8 787 aa18.56■□□□□ 0.56
ITGB1-211ENST00000475184 ZDBF2Q9HCK1 2354 aa18.56■□□□□ 0.56
ITGB1-211ENST00000475184 NEDD4P46934 1319 aa18.55■□□□□ 0.56
ITGB1-211ENST00000475184 ASPRV1Q53RT3 343 aa18.55■□□□□ 0.56
ITGB1-211ENST00000475184 MYSM1Q5VVJ2 828 aa18.55■□□□□ 0.56
ITGB1-211ENST00000475184 FBXO11Q86XK2 927 aa18.55■□□□□ 0.56
ITGB1-211ENST00000475184 FBXL18Q96ME1 805 aa18.55■□□□□ 0.56
ITGB1-211ENST00000475184 SPATA33Q96N06 139 aa18.55■□□□□ 0.56
ITGB1-211ENST00000475184 NSUN3Q9H649 340 aaKnown RBP18.55■□□□□ 0.56
ITGB1-211ENST00000475184 CCDC171Q6TFL3 1326 aa18.54■□□□□ 0.56
ITGB1-211ENST00000475184 DHX16O60231 1041 aaKnown RBP18.54■□□□□ 0.56
ITGB1-211ENST00000475184 SORBS3O60504 671 aa18.54■□□□□ 0.56
ITGB1-211ENST00000475184 CFBP00751 764 aa18.54■□□□□ 0.56
ITGB1-211ENST00000475184 HSDL1Q3SXM5 330 aa18.54■□□□□ 0.56
ITGB1-211ENST00000475184 CELF3Q5SZQ8 465 aaKnown RBP18.54■□□□□ 0.56
ITGB1-211ENST00000475184 TMEM192Q8IY95 271 aa18.54■□□□□ 0.56
ITGB1-211ENST00000475184 SEPT8Q92599 483 aa18.54■□□□□ 0.56
ITGB1-211ENST00000475184 ATP6V0A1Q93050 837 aa18.54■□□□□ 0.56
ITGB1-211ENST00000475184 TOP1MTQ969P6 601 aa18.54■□□□□ 0.56
ITGB1-211ENST00000475184 C17orf102A2RUQ5 167 aa18.53■□□□□ 0.56
ITGB1-211ENST00000475184 C19orf67A6NJJ6 358 aa18.53■□□□□ 0.56
ITGB1-211ENST00000475184 RGS20O76081 388 aa18.53■□□□□ 0.56
ITGB1-211ENST00000475184 UPP2O95045 317 aa18.53■□□□□ 0.56
ITGB1-211ENST00000475184 GGPS1O95749 300 aa18.53■□□□□ 0.56
ITGB1-211ENST00000475184 HSD17B4P51659 736 aa18.53■□□□□ 0.56
ITGB1-211ENST00000475184 NMIQ13287 307 aaPredicted RBP18.53■□□□□ 0.56
ITGB1-211ENST00000475184 KCNV1Q6PIU1 500 aa18.53■□□□□ 0.56
ITGB1-211ENST00000475184 IQCA1Q86XH1 822 aa18.53■□□□□ 0.56
ITGB1-211ENST00000475184 ADHFE1Q8IWW8 467 aa18.53■□□□□ 0.56
ITGB1-211ENST00000475184 C16orf70Q9BSU1 422 aa18.53■□□□□ 0.56
ITGB1-211ENST00000475184 KAT14Q9H8E8 782 aa18.53■□□□□ 0.56
ITGB1-211ENST00000475184 CLDND1Q9NY35 253 aa18.53■□□□□ 0.56
ITGB1-211ENST00000475184 ZBTB47Q9UFB7 747 aaPredicted RBP18.53■□□□□ 0.56
ITGB1-211ENST00000475184 USP34Q70CQ2 3546 aa18.52■□□□□ 0.56
ITGB1-211ENST00000475184 CACNA1HO95180 2353 aa18.52■□□□□ 0.56
ITGB1-211ENST00000475184 OPLAHO14841 1288 aa18.52■□□□□ 0.56
ITGB1-211ENST00000475184 MYCLP12524 364 aaPredicted RBP18.52■□□□□ 0.56
ITGB1-211ENST00000475184 HOXC8P31273 242 aa18.52■□□□□ 0.56
ITGB1-211ENST00000475184 CCDC178Q5BJE1 867 aa18.52■□□□□ 0.56
ITGB1-211ENST00000475184 TICAM2Q86XR7 235 aa18.52■□□□□ 0.56
ITGB1-211ENST00000475184 PDCD2LQ9BRP1 358 aa18.52■□□□□ 0.56
ITGB1-211ENST00000475184 IFIH1Q9BYX4 1025 aaKnown RBP18.52■□□□□ 0.56
ITGB1-211ENST00000475184 UPF3BQ9BZI7 483 aaKnown RBP18.52■□□□□ 0.56
ITGB1-211ENST00000475184 JMJD4Q9H9V9 463 aa18.52■□□□□ 0.56
ITGB1-211ENST00000475184 VAT1LQ9HCJ6 419 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms