RNA–Protein interactions for RNA: ENST00000474962.1

CLIP2-204, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 3

Gene CLIP2, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-204ENST00000474962 VSIG10LQ86VR7 867 aa13.67□□□□□ -0.22
CLIP2-204ENST00000474962 FCHSD1Q86WN1 690 aa13.67□□□□□ -0.22
CLIP2-204ENST00000474962 RPUSD2Q8IZ73 545 aaKnown RBP13.67□□□□□ -0.22
CLIP2-204ENST00000474962 ZNF654Q8IZM8 581 aa13.67□□□□□ -0.22
CLIP2-204ENST00000474962 KAT2BQ92831 832 aa13.67□□□□□ -0.22
CLIP2-204ENST00000474962 BRF1Q92994 677 aa13.67□□□□□ -0.22
CLIP2-204ENST00000474962 MYL10Q9BUA6 226 aa13.67□□□□□ -0.22
CLIP2-204ENST00000474962 MYO9BQ13459 2157 aa13.66□□□□□ -0.22
CLIP2-204ENST00000474962 GCOM1H8Y6P7 765 aaPredicted RBP13.66□□□□□ -0.22
CLIP2-204ENST00000474962 DDAH1O94760 285 aa13.66□□□□□ -0.22
CLIP2-204ENST00000474962 MMP3P08254 477 aa13.66□□□□□ -0.22
CLIP2-204ENST00000474962 POLR2MP0CAP2 368 aa13.66□□□□□ -0.22
CLIP2-204ENST00000474962 KIF5BP33176 963 aa13.66□□□□□ -0.22
CLIP2-204ENST00000474962 RABGGTBP53611 331 aa13.66□□□□□ -0.22
CLIP2-204ENST00000474962 SP2Q02086 613 aa13.66□□□□□ -0.22
CLIP2-204ENST00000474962 MAFAQ8NHW3 353 aaPredicted RBP13.66□□□□□ -0.22
CLIP2-204ENST00000474962 IL31RAQ8NI17 732 aa13.66□□□□□ -0.22
CLIP2-204ENST00000474962 GPKOWQ92917 476 aaPredicted RBP eCLIP13.66□□□□□ -0.22
CLIP2-204ENST00000474962 PDCD2LQ9BRP1 358 aa13.66□□□□□ -0.22
CLIP2-204ENST00000474962 BCAS3Q9H6U6 928 aa13.66□□□□□ -0.22
CLIP2-204ENST00000474962 MAP3K20Q9NYL2 800 aaKnown RBP13.66□□□□□ -0.22
CLIP2-204ENST00000474962 MRVI1Q9Y6F6 885 aa13.66□□□□□ -0.22
CLIP2-204ENST00000474962 TMEM265A0A087WTH1 108 aa13.65□□□□□ -0.22
CLIP2-204ENST00000474962 KLF18A0A0U1RQI7 1052 aa13.65□□□□□ -0.22
CLIP2-204ENST00000474962 IQCF3P0C7M6 154 aa13.65□□□□□ -0.22
CLIP2-204ENST00000474962 FOSL2P15408 326 aa13.65□□□□□ -0.22
CLIP2-204ENST00000474962 LAMC2Q13753 1193 aa13.65□□□□□ -0.22
CLIP2-204ENST00000474962 PGM5Q15124 567 aa13.65□□□□□ -0.22
CLIP2-204ENST00000474962 PTGISQ16647 500 aa13.65□□□□□ -0.22
CLIP2-204ENST00000474962 DGKDQ16760 1214 aa13.65□□□□□ -0.22
CLIP2-204ENST00000474962 GDF6Q6KF10 455 aaPredicted RBP13.65□□□□□ -0.22
CLIP2-204ENST00000474962 SGMS1Q86VZ5 419 aa13.65□□□□□ -0.22
CLIP2-204ENST00000474962 MICU3Q86XE3 530 aa13.65□□□□□ -0.22
CLIP2-204ENST00000474962 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.65□□□□□ -0.22
CLIP2-204ENST00000474962 DHX37Q8IY37 1157 aaKnown RBP13.65□□□□□ -0.22
CLIP2-204ENST00000474962 CMTR1Q8N1G2 835 aaKnown RBP13.65□□□□□ -0.22
CLIP2-204ENST00000474962 TBC1D32Q96NH3 1257 aa13.65□□□□□ -0.22
CLIP2-204ENST00000474962 CTAGE1Q96RT6 745 aa13.65□□□□□ -0.22
CLIP2-204ENST00000474962 SPTBN5Q9NRC6 3674 aaKnown RBP13.65□□□□□ -0.23
CLIP2-204ENST00000474962 MYH6P13533 1939 aa13.64□□□□□ -0.23
CLIP2-204ENST00000474962 TRANK1O15050 2925 aa13.64□□□□□ -0.23
CLIP2-204ENST00000474962 SCN10AQ9Y5Y9 1956 aa13.64□□□□□ -0.23
CLIP2-204ENST00000474962 ZBTB43O43298 467 aa13.64□□□□□ -0.23
CLIP2-204ENST00000474962 MYOGP15173 224 aa13.64□□□□□ -0.23
CLIP2-204ENST00000474962 GNAQP50148 359 aa13.64□□□□□ -0.23
CLIP2-204ENST00000474962 PTPN11Q06124 597 aaPredicted RBP13.64□□□□□ -0.23
CLIP2-204ENST00000474962 APOBRQ0VD83 1088 aa13.64□□□□□ -0.23
CLIP2-204ENST00000474962 RABEP1Q15276 862 aa13.64□□□□□ -0.23
CLIP2-204ENST00000474962 MYSM1Q5VVJ2 828 aa13.64□□□□□ -0.23
CLIP2-204ENST00000474962 FBXL16Q8N461 479 aa13.64□□□□□ -0.23
CLIP2-204ENST00000474962 SAMD3Q8N6K7 520 aa13.64□□□□□ -0.23
CLIP2-204ENST00000474962 RETREG2Q8NC44 543 aa13.64□□□□□ -0.23
CLIP2-204ENST00000474962 IL27Q8NEV9 243 aa13.64□□□□□ -0.23
CLIP2-204ENST00000474962 EMID1Q96A84 441 aaPredicted RBP13.64□□□□□ -0.23
CLIP2-204ENST00000474962 MAP3K14Q99558 947 aa13.64□□□□□ -0.23
CLIP2-204ENST00000474962 ALG1Q9BT22 464 aa13.64□□□□□ -0.23
CLIP2-204ENST00000474962 HDAC6Q9UBN7 1215 aa13.64□□□□□ -0.23
CLIP2-204ENST00000474962 MSRAQ9UJ68 235 aa13.64□□□□□ -0.23
CLIP2-204ENST00000474962 YBX2Q9Y2T7 364 aaKnown RBP13.64□□□□□ -0.23
CLIP2-204ENST00000474962 SLC4A7Q9Y6M7 1214 aa13.64□□□□□ -0.23
CLIP2-204ENST00000474962 XIRP2A4UGR9 3374 aa13.64□□□□□ -0.23
CLIP2-204ENST00000474962 CCDC196A0A1B0GTZ2 297 aa13.63□□□□□ -0.23
CLIP2-204ENST00000474962 ZBBXA8MT70 800 aa13.63□□□□□ -0.23
CLIP2-204ENST00000474962 ST18O60284 1047 aa13.63□□□□□ -0.23
CLIP2-204ENST00000474962 PPFIA4O75335 1185 aa13.63□□□□□ -0.23
CLIP2-204ENST00000474962 ZNF286BP0CG31 522 aa13.63□□□□□ -0.23
CLIP2-204ENST00000474962 RXRAP19793 462 aa13.63□□□□□ -0.23
CLIP2-204ENST00000474962 TRAF1Q13077 416 aa13.63□□□□□ -0.23
CLIP2-204ENST00000474962 GPNMBQ14956 572 aa13.63□□□□□ -0.23
CLIP2-204ENST00000474962 HSDL1Q3SXM5 330 aa13.63□□□□□ -0.23
CLIP2-204ENST00000474962 CELF3Q5SZQ8 465 aaKnown RBP13.63□□□□□ -0.23
CLIP2-204ENST00000474962 APOA5Q6Q788 366 aa13.63□□□□□ -0.23
CLIP2-204ENST00000474962 USP17L6PQ6QN14 398 aa13.63□□□□□ -0.23
CLIP2-204ENST00000474962 RAB11FIP4Q86YS3 637 aa13.63□□□□□ -0.23
CLIP2-204ENST00000474962 SRBD1Q8N5C6 995 aaKnown RBP13.63□□□□□ -0.23
CLIP2-204ENST00000474962 FANCBQ8NB91 859 aa13.63□□□□□ -0.23
CLIP2-204ENST00000474962 PPTC7Q8NI37 304 aa13.63□□□□□ -0.23
CLIP2-204ENST00000474962 IL17RAQ96F46 866 aa13.63□□□□□ -0.23
CLIP2-204ENST00000474962 LZTS2Q9BRK4 669 aa13.63□□□□□ -0.23
CLIP2-204ENST00000474962 MTIF3Q9H2K0 278 aaKnown RBP13.63□□□□□ -0.23
CLIP2-204ENST00000474962 NKX2-4Q9H2Z4 354 aa13.63□□□□□ -0.23
CLIP2-204ENST00000474962 PRDM12Q9H4Q4 367 aa13.63□□□□□ -0.23
CLIP2-204ENST00000474962 RBM28Q9NW13 759 aaKnown RBP13.63□□□□□ -0.23
CLIP2-204ENST00000474962 RTEL1Q9NZ71 1219 aa13.63□□□□□ -0.23
CLIP2-204ENST00000474962 NOD1Q9Y239 953 aa13.63□□□□□ -0.23
CLIP2-204ENST00000474962 GOLGA8AA7E2F4 631 aa13.62□□□□□ -0.23
CLIP2-204ENST00000474962 GOLGA8BA8MQT2 603 aa13.62□□□□□ -0.23
CLIP2-204ENST00000474962 PITPNM1O00562 1244 aa13.62□□□□□ -0.23
CLIP2-204ENST00000474962 PLEKHA8P1O95397 391 aa13.62□□□□□ -0.23
CLIP2-204ENST00000474962 GGPS1O95749 300 aa13.62□□□□□ -0.23
CLIP2-204ENST00000474962 TGFB3P10600 412 aa13.62□□□□□ -0.23
CLIP2-204ENST00000474962 PSEN2P49810 448 aa13.62□□□□□ -0.23
CLIP2-204ENST00000474962 METAP2P50579 478 aaKnown RBP eCLIP13.62□□□□□ -0.23
CLIP2-204ENST00000474962 RCAN1P53805 252 aa13.62□□□□□ -0.23
CLIP2-204ENST00000474962 MRPS9P82933 396 aaKnown RBP13.62□□□□□ -0.23
CLIP2-204ENST00000474962 ZNF200P98182 395 aaPredicted RBP13.62□□□□□ -0.23
CLIP2-204ENST00000474962 BFSP2Q13515 415 aa13.62□□□□□ -0.23
CLIP2-204ENST00000474962 RTN1Q16799 776 aa13.62□□□□□ -0.23
CLIP2-204ENST00000474962 KIAA0753Q2KHM9 967 aa13.62□□□□□ -0.23
CLIP2-204ENST00000474962 KCNV1Q6PIU1 500 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms