RNA–Protein interactions for RNA: ENST00000474742.1

HDAC9-222, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-222ENST00000474742 HEATR6Q6AI08 1181 aaKnown RBP1.62□□□□□ -2.15
HDAC9-222ENST00000474742 ANKS3Q6ZW76 656 aa1.62□□□□□ -2.15
HDAC9-222ENST00000474742 CCDC103Q8IW40 242 aa1.62□□□□□ -2.15
HDAC9-222ENST00000474742 TRIM59Q8IWR1 403 aa1.62□□□□□ -2.15
HDAC9-222ENST00000474742 FAM178BQ8IXR5 827 aa1.62□□□□□ -2.15
HDAC9-222ENST00000474742 KYQ8NBH2 561 aa1.62□□□□□ -2.15
HDAC9-222ENST00000474742 KREMEN2Q8NCW0 462 aa1.62□□□□□ -2.15
HDAC9-222ENST00000474742 GIMAP8Q8ND71 665 aaPredicted RBP1.62□□□□□ -2.15
HDAC9-222ENST00000474742 NPLOC4Q8TAT6 608 aa1.62□□□□□ -2.15
HDAC9-222ENST00000474742 IGDCC4Q8TDY8 1250 aa1.62□□□□□ -2.15
HDAC9-222ENST00000474742 FRS2Q8WU20 508 aa1.62□□□□□ -2.15
HDAC9-222ENST00000474742 DPF3Q92784 378 aa1.62□□□□□ -2.15
HDAC9-222ENST00000474742 COPS5Q92905 334 aa1.62□□□□□ -2.15
HDAC9-222ENST00000474742 ZG16BQ96DA0 208 aa1.62□□□□□ -2.15
HDAC9-222ENST00000474742 C1orf159Q96HA4 380 aa1.62□□□□□ -2.15
HDAC9-222ENST00000474742 RCC1LQ96I51 464 aaKnown RBP1.62□□□□□ -2.15
HDAC9-222ENST00000474742 CRAMP1Q96RY5 1269 aa1.62□□□□□ -2.15
HDAC9-222ENST00000474742 GORASP1Q9BQQ3 440 aa1.62□□□□□ -2.15
HDAC9-222ENST00000474742 TMEM168Q9H0V1 697 aa1.62□□□□□ -2.15
HDAC9-222ENST00000474742 BCL11AQ9H165 835 aa1.62□□□□□ -2.15
HDAC9-222ENST00000474742 ST7Q9NRC1 585 aa1.62□□□□□ -2.15
HDAC9-222ENST00000474742 ACTR10Q9NZ32 417 aa1.62□□□□□ -2.15
HDAC9-222ENST00000474742 WHRNQ9P202 907 aa1.62□□□□□ -2.15
HDAC9-222ENST00000474742 FBXL7Q9UJT9 491 aa1.62□□□□□ -2.15
HDAC9-222ENST00000474742 STRIP2Q9ULQ0 834 aa1.62□□□□□ -2.15
HDAC9-222ENST00000474742 DIS3Q9Y2L1 958 aaKnown RBP1.62□□□□□ -2.15
HDAC9-222ENST00000474742 ZDHHC9Q9Y397 364 aa1.62□□□□□ -2.15
HDAC9-222ENST00000474742 A0A1W2PQU0 124 aa1.61□□□□□ -2.15
HDAC9-222ENST00000474742 ANKRD34BA5PLL1 514 aa1.61□□□□□ -2.15
HDAC9-222ENST00000474742 C2orf71A6NGG8 1288 aa1.61□□□□□ -2.15
HDAC9-222ENST00000474742 C9orf118A6NHY6 69 aa1.61□□□□□ -2.15
HDAC9-222ENST00000474742 B4GALT3O60512 393 aa1.61□□□□□ -2.15
HDAC9-222ENST00000474742 B4GALT4O60513 344 aa1.61□□□□□ -2.15
HDAC9-222ENST00000474742 ZNF623O75123 536 aa1.61□□□□□ -2.15
HDAC9-222ENST00000474742 CYP7B1O75881 506 aa1.61□□□□□ -2.15
HDAC9-222ENST00000474742 DDAH1O94760 285 aa1.61□□□□□ -2.15
HDAC9-222ENST00000474742 ZNF202O95125 648 aa1.61□□□□□ -2.15
HDAC9-222ENST00000474742 KCNH1O95259 989 aa1.61□□□□□ -2.15
HDAC9-222ENST00000474742 SSBP05455 408 aaKnown RBP eCLIP1.61□□□□□ -2.15
HDAC9-222ENST00000474742 THBDP07204 575 aa1.61□□□□□ -2.15
HDAC9-222ENST00000474742 C8BP07358 591 aa1.61□□□□□ -2.15
HDAC9-222ENST00000474742 LCP1P13796 627 aa1.61□□□□□ -2.15
HDAC9-222ENST00000474742 NANOS3P60323 173 aaKnown RBP1.61□□□□□ -2.15
HDAC9-222ENST00000474742 ZC3H6P61129 1189 aaKnown RBP1.61□□□□□ -2.15
HDAC9-222ENST00000474742 PPP2CBP62714 309 aa1.61□□□□□ -2.15
HDAC9-222ENST00000474742 PPP2CAP67775 309 aa1.61□□□□□ -2.15
HDAC9-222ENST00000474742 NKX3-2P78367 333 aa1.61□□□□□ -2.15
HDAC9-222ENST00000474742 SCRN1Q12765 414 aa1.61□□□□□ -2.15
HDAC9-222ENST00000474742 FOXE3Q13461 319 aa1.61□□□□□ -2.15
HDAC9-222ENST00000474742 SERINC3Q13530 473 aa1.61□□□□□ -2.15
HDAC9-222ENST00000474742 TCEAL1Q15170 157 aa1.61□□□□□ -2.15
HDAC9-222ENST00000474742 DDR2Q16832 855 aa1.61□□□□□ -2.15
HDAC9-222ENST00000474742 YOD1Q5VVQ6 348 aaPredicted RBP1.61□□□□□ -2.15
HDAC9-222ENST00000474742 WWC2Q6AWC2 1192 aa1.61□□□□□ -2.15
HDAC9-222ENST00000474742 GTF2IRD2BQ6EKJ0 949 aa1.61□□□□□ -2.15
HDAC9-222ENST00000474742 RCSD1Q6JBY9 416 aa1.61□□□□□ -2.15
HDAC9-222ENST00000474742 SPATC1Q76KD6 591 aa1.61□□□□□ -2.15
HDAC9-222ENST00000474742 ADAT2Q7Z6V5 191 aaKnown RBP1.61□□□□□ -2.15
HDAC9-222ENST00000474742 GTF2IRD2Q86UP8 949 aa1.61□□□□□ -2.15
HDAC9-222ENST00000474742 ZNF227Q86WZ6 799 aa1.61□□□□□ -2.15
HDAC9-222ENST00000474742 ZNF575Q86XF7 245 aa1.61□□□□□ -2.15
HDAC9-222ENST00000474742 CPNE8Q86YQ8 564 aa1.61□□□□□ -2.15
HDAC9-222ENST00000474742 DCP2Q8IU60 420 aaKnown RBP1.61□□□□□ -2.15
HDAC9-222ENST00000474742 KBTBD2Q8IY47 623 aa1.61□□□□□ -2.15
HDAC9-222ENST00000474742 LINC00482Q8N8I6 264 aa1.61□□□□□ -2.15
HDAC9-222ENST00000474742 NETO2Q8NC67 525 aa1.61□□□□□ -2.15
HDAC9-222ENST00000474742 BVESQ8NE79 360 aa1.61□□□□□ -2.15
HDAC9-222ENST00000474742 NLGN2Q8NFZ4 835 aa1.61□□□□□ -2.15
HDAC9-222ENST00000474742 BTN2A2Q8WVV5 523 aa1.61□□□□□ -2.15
HDAC9-222ENST00000474742 NEU4Q8WWR8 484 aaPredicted RBP1.61□□□□□ -2.15
HDAC9-222ENST00000474742 NAF1Q96HR8 494 aaKnown RBP1.61□□□□□ -2.15
HDAC9-222ENST00000474742 CLIC6Q96NY7 704 aa1.61□□□□□ -2.15
HDAC9-222ENST00000474742 CEP89Q96ST8 783 aa1.61□□□□□ -2.15
HDAC9-222ENST00000474742 SYT3Q9BQG1 590 aa1.61□□□□□ -2.15
HDAC9-222ENST00000474742 MTA3Q9BTC8 594 aa1.61□□□□□ -2.15
HDAC9-222ENST00000474742 TRIM8Q9BZR9 551 aa1.61□□□□□ -2.15
HDAC9-222ENST00000474742 BARX1Q9HBU1 254 aaPredicted RBP1.61□□□□□ -2.15
HDAC9-222ENST00000474742 BTG4Q9NY30 223 aa1.61□□□□□ -2.15
HDAC9-222ENST00000474742 CLEC1BQ9P126 229 aa1.61□□□□□ -2.15
HDAC9-222ENST00000474742 PPP4R1LQ9P1A2 415 aa1.61□□□□□ -2.15
HDAC9-222ENST00000474742 GULP1Q9UBP9 304 aa1.61□□□□□ -2.15
HDAC9-222ENST00000474742 FTSJ1Q9UET6 329 aa1.61□□□□□ -2.15
HDAC9-222ENST00000474742 CROTQ9UKG9 612 aa1.61□□□□□ -2.15
HDAC9-222ENST00000474742 AKT3Q9Y243 479 aa1.61□□□□□ -2.15
HDAC9-222ENST00000474742 MSRB2Q9Y3D2 182 aa1.61□□□□□ -2.15
HDAC9-222ENST00000474742 SIT1Q9Y3P8 196 aa1.61□□□□□ -2.15
HDAC9-222ENST00000474742 SLC12A7Q9Y666 1083 aa1.61□□□□□ -2.15
HDAC9-222ENST00000474742 TRBV23OR9-2A0A075B6M9 112 aa1.6□□□□□ -2.15
HDAC9-222ENST00000474742 A0A087X1B8 175 aa1.6□□□□□ -2.15
HDAC9-222ENST00000474742 NPHP3-ACAD11A0A0J9YXS1 232 aa1.6□□□□□ -2.15
HDAC9-222ENST00000474742 C7orf72A4D263 438 aa1.6□□□□□ -2.15
HDAC9-222ENST00000474742 FAM221BA6H8Z2 402 aa1.6□□□□□ -2.15
HDAC9-222ENST00000474742 GPR42O15529 346 aa1.6□□□□□ -2.15
HDAC9-222ENST00000474742 ADCY3O60266 1144 aa1.6□□□□□ -2.15
HDAC9-222ENST00000474742 DLX3O60479 287 aa1.6□□□□□ -2.15
HDAC9-222ENST00000474742 NPHS1O60500 1241 aa1.6□□□□□ -2.15
HDAC9-222ENST00000474742 MSCO60682 206 aa1.6□□□□□ -2.15
HDAC9-222ENST00000474742 PPM1BO75688 479 aa1.6□□□□□ -2.15
HDAC9-222ENST00000474742 NTRK1P04629 796 aa1.6□□□□□ -2.15
HDAC9-222ENST00000474742 SCG5P05408 212 aa1.6□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms