RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 PI4K2BG5E9Z4 385 aa8.01□□□□□ -1.13
LIMD1-204ENST00000474665 NR3C2P08235 984 aa8.01□□□□□ -1.13
LIMD1-204ENST00000474665 EIF2AK2P19525 551 aaKnown RBP8.01□□□□□ -1.13
LIMD1-204ENST00000474665 CCND3P30281 292 aaPredicted RBP8.01□□□□□ -1.13
LIMD1-204ENST00000474665 PBX2P40425 430 aa8.01□□□□□ -1.13
LIMD1-204ENST00000474665 ADCY7P51828 1080 aa8.01□□□□□ -1.13
LIMD1-204ENST00000474665 MRPS9P82933 396 aaKnown RBP8.01□□□□□ -1.13
LIMD1-204ENST00000474665 TRAF1Q13077 416 aa8.01□□□□□ -1.13
LIMD1-204ENST00000474665 JAKMIP3Q5VZ66 844 aa8.01□□□□□ -1.13
LIMD1-204ENST00000474665 KRT40Q6A162 431 aa8.01□□□□□ -1.13
LIMD1-204ENST00000474665 TAPT1Q6NXT6 567 aa8.01□□□□□ -1.13
LIMD1-204ENST00000474665 VSIG10LQ86VR7 867 aa8.01□□□□□ -1.13
LIMD1-204ENST00000474665 DAGLBQ8NCG7 672 aa8.01□□□□□ -1.13
LIMD1-204ENST00000474665 DNERQ8NFT8 737 aa8.01□□□□□ -1.13
LIMD1-204ENST00000474665 FBXO18Q8NFZ0 1043 aa8.01□□□□□ -1.13
LIMD1-204ENST00000474665 NSUN6Q8TEA1 469 aaKnown RBP8.01□□□□□ -1.13
LIMD1-204ENST00000474665 CUL5Q93034 780 aa8.01□□□□□ -1.13
LIMD1-204ENST00000474665 PDCD2LQ9BRP1 358 aa8.01□□□□□ -1.13
LIMD1-204ENST00000474665 PDGFCQ9NRA1 345 aa8.01□□□□□ -1.13
LIMD1-204ENST00000474665 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.01□□□□□ -1.13
LIMD1-204ENST00000474665 MAP3K20Q9NYL2 800 aaKnown RBP8.01□□□□□ -1.13
LIMD1-204ENST00000474665 PCDHA6Q9UN73 950 aa8.01□□□□□ -1.13
LIMD1-204ENST00000474665 PCDHA4Q9UN74 947 aa8.01□□□□□ -1.13
LIMD1-204ENST00000474665 PCDHA8Q9Y5H6 950 aa8.01□□□□□ -1.13
LIMD1-204ENST00000474665 WDR81Q562E7 1941 aa8□□□□□ -1.13
LIMD1-204ENST00000474665 TRIM43BA6NCK2 446 aa8□□□□□ -1.13
LIMD1-204ENST00000474665 PRR33A8MZF0 331 aa8□□□□□ -1.13
LIMD1-204ENST00000474665 KIF28PB7ZC32 967 aa8□□□□□ -1.13
LIMD1-204ENST00000474665 WNT7AO00755 349 aa8□□□□□ -1.13
LIMD1-204ENST00000474665 ITGB8P26012 769 aa8□□□□□ -1.13
LIMD1-204ENST00000474665 GJB2P29033 226 aa8□□□□□ -1.13
LIMD1-204ENST00000474665 MRPL12P52815 198 aaKnown RBP8□□□□□ -1.13
LIMD1-204ENST00000474665 HMGN5P82970 282 aaKnown RBP8□□□□□ -1.13
LIMD1-204ENST00000474665 GUCY1B3Q02153 619 aa8□□□□□ -1.13
LIMD1-204ENST00000474665 SEMA3FQ13275 785 aa8□□□□□ -1.13
LIMD1-204ENST00000474665 NR5A1Q13285 461 aa8□□□□□ -1.13
LIMD1-204ENST00000474665 PGM5Q15124 567 aa8□□□□□ -1.13
LIMD1-204ENST00000474665 EEPD1Q7L9B9 569 aa8□□□□□ -1.13
LIMD1-204ENST00000474665 TEX2Q8IWB9 1127 aa8□□□□□ -1.13
LIMD1-204ENST00000474665 FBXO16Q8IX29 292 aaPredicted RBP8□□□□□ -1.13
LIMD1-204ENST00000474665 TRMT44Q8IYL2 757 aaKnown RBP8□□□□□ -1.13
LIMD1-204ENST00000474665 FAM177A1Q8N128 213 aaPredicted RBP8□□□□□ -1.13
LIMD1-204ENST00000474665 REXO1Q8N1G1 1221 aaKnown RBP8□□□□□ -1.13
LIMD1-204ENST00000474665 MICALL1Q8N3F8 863 aa8□□□□□ -1.13
LIMD1-204ENST00000474665 MSL3Q8N5Y2 521 aaKnown RBP8□□□□□ -1.13
LIMD1-204ENST00000474665 CYP2W1Q8TAV3 490 aa8□□□□□ -1.13
LIMD1-204ENST00000474665 TRIM43Q96BQ3 446 aaPredicted RBP8□□□□□ -1.13
LIMD1-204ENST00000474665 LENG1Q96BZ8 264 aaPredicted RBP8□□□□□ -1.13
LIMD1-204ENST00000474665 INTS4Q96HW7 963 aaKnown RBP8□□□□□ -1.13
LIMD1-204ENST00000474665 ANO3Q9BYT9 981 aa8□□□□□ -1.13
LIMD1-204ENST00000474665 TSPYL2Q9H2G4 693 aaPredicted RBP8□□□□□ -1.13
LIMD1-204ENST00000474665 CD320Q9NPF0 282 aa8□□□□□ -1.13
LIMD1-204ENST00000474665 FOXD4L1Q9NU39 408 aa8□□□□□ -1.13
LIMD1-204ENST00000474665 SLC5A4Q9NY91 659 aa8□□□□□ -1.13
LIMD1-204ENST00000474665 LOC102724159A0A0B4J2E5 919 aa7.99□□□□□ -1.13
LIMD1-204ENST00000474665 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.99□□□□□ -1.13
LIMD1-204ENST00000474665 RBM47A0AV96 593 aaKnown RBP7.99□□□□□ -1.13
LIMD1-204ENST00000474665 ASB14A6NK59 587 aa7.99□□□□□ -1.13
LIMD1-204ENST00000474665 GRXCR1A8MXD5 290 aa7.99□□□□□ -1.13
LIMD1-204ENST00000474665 BTBD18B2RXH4 712 aa7.99□□□□□ -1.13
LIMD1-204ENST00000474665 CTAGE5O15320 804 aa7.99□□□□□ -1.13
LIMD1-204ENST00000474665 ARIH2O95376 493 aa7.99□□□□□ -1.13
LIMD1-204ENST00000474665 MMP1P03956 469 aa7.99□□□□□ -1.13
LIMD1-204ENST00000474665 ITGB5P18084 799 aa7.99□□□□□ -1.13
LIMD1-204ENST00000474665 GNA11P29992 359 aa7.99□□□□□ -1.13
LIMD1-204ENST00000474665 SREBF1P36956 1147 aa7.99□□□□□ -1.13
LIMD1-204ENST00000474665 NLRP5P59047 1200 aa7.99□□□□□ -1.13
LIMD1-204ENST00000474665 IRX5P78411 483 aaPredicted RBP7.99□□□□□ -1.13
LIMD1-204ENST00000474665 ACVR2BQ13705 512 aa7.99□□□□□ -1.13
LIMD1-204ENST00000474665 PWP2Q15269 919 aaKnown RBP7.99□□□□□ -1.13
LIMD1-204ENST00000474665 AAK1Q2M2I8 961 aa7.99□□□□□ -1.13
LIMD1-204ENST00000474665 GJC2Q5T442 439 aaPredicted RBP7.99□□□□□ -1.13
LIMD1-204ENST00000474665 ARHGEF16Q5VV41 709 aa7.99□□□□□ -1.13
LIMD1-204ENST00000474665 MFSD14CQ5VZR4 134 aa7.99□□□□□ -1.13
LIMD1-204ENST00000474665 CCDC62Q6P9F0 684 aa7.99□□□□□ -1.13
LIMD1-204ENST00000474665 BLIDQ8IZY5 108 aa7.99□□□□□ -1.13
LIMD1-204ENST00000474665 CCDC148Q8NFR7 591 aa7.99□□□□□ -1.13
LIMD1-204ENST00000474665 CCDC12Q8WUD4 166 aaPredicted RBP7.99□□□□□ -1.13
LIMD1-204ENST00000474665 LENG9Q96B70 501 aa7.99□□□□□ -1.13
LIMD1-204ENST00000474665 C8orf76Q96K31 380 aa7.99□□□□□ -1.13
LIMD1-204ENST00000474665 INPP4AQ96PE3 977 aaPredicted RBP7.99□□□□□ -1.13
LIMD1-204ENST00000474665 IWS1Q96ST2 819 aa7.99□□□□□ -1.13
LIMD1-204ENST00000474665 ABHD16BQ9H3Z7 469 aa7.99□□□□□ -1.13
LIMD1-204ENST00000474665 BCAS3Q9H6U6 928 aa7.99□□□□□ -1.13
LIMD1-204ENST00000474665 C6orf50Q9HD87 102 aa7.99□□□□□ -1.13
LIMD1-204ENST00000474665 TSHZ2Q9NRE2 1034 aa7.99□□□□□ -1.13
LIMD1-204ENST00000474665 ADD3Q9UEY8 706 aaKnown RBP7.99□□□□□ -1.13
LIMD1-204ENST00000474665 TELO2Q9Y4R8 837 aa7.99□□□□□ -1.13
LIMD1-204ENST00000474665 IGLV3-22A0A075B6J6 115 aa7.98□□□□□ -1.13
LIMD1-204ENST00000474665 FAM86B1E9PN63 330 aa7.98□□□□□ -1.13
LIMD1-204ENST00000474665 TLL1O43897 1013 aa7.98□□□□□ -1.13
LIMD1-204ENST00000474665 KRT37O76014 449 aa7.98□□□□□ -1.13
LIMD1-204ENST00000474665 FOSP01100 380 aaPredicted RBP7.98□□□□□ -1.13
LIMD1-204ENST00000474665 CYP3A4P08684 503 aa7.98□□□□□ -1.13
LIMD1-204ENST00000474665 FAM86B2P0C5J1 330 aa7.98□□□□□ -1.13
LIMD1-204ENST00000474665 MYCLP12524 364 aaPredicted RBP7.98□□□□□ -1.13
LIMD1-204ENST00000474665 SMPD1P17405 629 aa7.98□□□□□ -1.13
LIMD1-204ENST00000474665 ADCYAP1R1P41586 468 aa7.98□□□□□ -1.13
LIMD1-204ENST00000474665 ARHGAP4P98171 946 aa7.98□□□□□ -1.13
LIMD1-204ENST00000474665 SP2Q02086 613 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms