RNA–Protein interactions for RNA: ENST00000474564.1

COL12A1-206, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 3

Gene COL12A1, Length 499 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-206ENST00000474564 TECP42680 631 aa11.67□□□□□ -0.54
COL12A1-206ENST00000474564 TTLL4Q14679 1199 aa11.67□□□□□ -0.54
COL12A1-206ENST00000474564 MORN1Q5T089 497 aa11.67□□□□□ -0.54
COL12A1-206ENST00000474564 MFSD14CQ5VZR4 134 aa11.67□□□□□ -0.54
COL12A1-206ENST00000474564 KRT79Q5XKE5 535 aa11.67□□□□□ -0.54
COL12A1-206ENST00000474564 HAUS3Q68CZ6 603 aa11.67□□□□□ -0.54
COL12A1-206ENST00000474564 SEPT14Q6ZU15 432 aa11.67□□□□□ -0.54
COL12A1-206ENST00000474564 POTEDQ86YR6 584 aa11.67□□□□□ -0.54
COL12A1-206ENST00000474564 CRYGNQ8WXF5 182 aa11.67□□□□□ -0.54
COL12A1-206ENST00000474564 MRPS27Q92552 414 aaKnown RBP11.67□□□□□ -0.54
COL12A1-206ENST00000474564 APBA2Q99767 749 aa11.67□□□□□ -0.54
COL12A1-206ENST00000474564 FTOQ9C0B1 505 aaKnown RBP eCLIP11.67□□□□□ -0.54
COL12A1-206ENST00000474564 VTA1Q9NP79 307 aa11.67□□□□□ -0.54
COL12A1-206ENST00000474564 KCNH7Q9NS40 1196 aa11.67□□□□□ -0.54
COL12A1-206ENST00000474564 LRWD1Q9UFC0 647 aa11.67□□□□□ -0.54
COL12A1-206ENST00000474564 MRVI1Q9Y6F6 885 aa11.67□□□□□ -0.54
COL12A1-206ENST00000474564 SYNGAP1Q96PV0 1343 aa11.66□□□□□ -0.54
COL12A1-206ENST00000474564 FAM86B1E9PN63 330 aa11.66□□□□□ -0.54
COL12A1-206ENST00000474564 DKC1O60832 514 aaKnown RBP eCLIP11.66□□□□□ -0.54
COL12A1-206ENST00000474564 KINO60870 393 aaKnown RBP11.66□□□□□ -0.54
COL12A1-206ENST00000474564 ECM2O94769 699 aaPredicted RBP11.66□□□□□ -0.54
COL12A1-206ENST00000474564 HOXC6P09630 235 aa11.66□□□□□ -0.54
COL12A1-206ENST00000474564 FAM86B2P0C5J1 330 aa11.66□□□□□ -0.54
COL12A1-206ENST00000474564 XRCC5P13010 732 aaKnown RBP11.66□□□□□ -0.54
COL12A1-206ENST00000474564 FXR2P51116 673 aaKnown RBP eCLIP11.66□□□□□ -0.54
COL12A1-206ENST00000474564 NEDD9Q14511 834 aa11.66□□□□□ -0.54
COL12A1-206ENST00000474564 KANK3Q6NY19 840 aa11.66□□□□□ -0.54
COL12A1-206ENST00000474564 FSIP1Q8NA03 581 aa11.66□□□□□ -0.54
COL12A1-206ENST00000474564 SCFD2Q8WU76 684 aa11.66□□□□□ -0.54
COL12A1-206ENST00000474564 MAML3Q96JK9 1138 aa11.66□□□□□ -0.54
COL12A1-206ENST00000474564 INPP4AQ96PE3 977 aaPredicted RBP11.66□□□□□ -0.54
COL12A1-206ENST00000474564 GZF1Q9H116 711 aaPredicted RBP11.66□□□□□ -0.54
COL12A1-206ENST00000474564 ABHD16BQ9H3Z7 469 aa11.66□□□□□ -0.54
COL12A1-206ENST00000474564 USP25Q9UHP3 1055 aa11.66□□□□□ -0.54
COL12A1-206ENST00000474564 FBXO2Q9UK22 296 aaPredicted RBP11.66□□□□□ -0.54
COL12A1-206ENST00000474564 SAMM50Q9Y512 469 aa11.66□□□□□ -0.54
COL12A1-206ENST00000474564 SLC37A4O43826 429 aa11.65□□□□□ -0.54
COL12A1-206ENST00000474564 COBLO75128 1261 aa11.65□□□□□ -0.54
COL12A1-206ENST00000474564 ITGB5P18084 799 aa11.65□□□□□ -0.54
COL12A1-206ENST00000474564 CYP2B6P20813 491 aa11.65□□□□□ -0.54
COL12A1-206ENST00000474564 SFNP31947 248 aa11.65□□□□□ -0.54
COL12A1-206ENST00000474564 ICAM3P32942 547 aa11.65□□□□□ -0.54
COL12A1-206ENST00000474564 MRPS9P82933 396 aaKnown RBP11.65□□□□□ -0.54
COL12A1-206ENST00000474564 KRT76Q01546 638 aa11.65□□□□□ -0.54
COL12A1-206ENST00000474564 IRF5Q13568 498 aa11.65□□□□□ -0.54
COL12A1-206ENST00000474564 OLFML2BQ68BL8 750 aa11.65□□□□□ -0.54
COL12A1-206ENST00000474564 MAMDC4Q6UXC1 1216 aa11.65□□□□□ -0.54
COL12A1-206ENST00000474564 ARMCX2Q7L311 632 aa11.65□□□□□ -0.54
COL12A1-206ENST00000474564 KCTD17Q8N5Z5 321 aa11.65□□□□□ -0.54
COL12A1-206ENST00000474564 C4orf32Q8N8J7 132 aa11.65□□□□□ -0.54
COL12A1-206ENST00000474564 SLC5A5Q92911 643 aa11.65□□□□□ -0.54
COL12A1-206ENST00000474564 CHAMP1Q96JM3 812 aa11.65□□□□□ -0.54
COL12A1-206ENST00000474564 MTMR9Q96QG7 549 aa11.65□□□□□ -0.54
COL12A1-206ENST00000474564 PURBQ96QR8 312 aaKnown RBP11.65□□□□□ -0.54
COL12A1-206ENST00000474564 SENP7Q9BQF6 1050 aa11.65□□□□□ -0.54
COL12A1-206ENST00000474564 TINF2Q9BSI4 451 aa11.65□□□□□ -0.54
COL12A1-206ENST00000474564 LRRC27Q9C0I9 530 aa11.65□□□□□ -0.54
COL12A1-206ENST00000474564 NT5C3AQ9H0P0 336 aa11.65□□□□□ -0.54
COL12A1-206ENST00000474564 CSRNP2Q9H175 543 aa11.65□□□□□ -0.54
COL12A1-206ENST00000474564 MLXIPQ9HAP2 919 aa11.65□□□□□ -0.54
COL12A1-206ENST00000474564 AGO4Q9HCK5 861 aaKnown RBP11.65□□□□□ -0.54
COL12A1-206ENST00000474564 KCNMB3Q9NPA1 279 aa11.65□□□□□ -0.54
COL12A1-206ENST00000474564 LMBRD1Q9NUN5 540 aa11.65□□□□□ -0.54
COL12A1-206ENST00000474564 RBBP6Q7Z6E9 1792 aaKnown RBP11.64□□□□□ -0.55
COL12A1-206ENST00000474564 KDM3AQ9Y4C1 1321 aa11.64□□□□□ -0.55
COL12A1-206ENST00000474564 IGLV3-22A0A075B6J6 115 aa11.64□□□□□ -0.55
COL12A1-206ENST00000474564 SPATA31C2B4DYI2 1134 aa11.64□□□□□ -0.55
COL12A1-206ENST00000474564 NKRFO15226 690 aaKnown RBP eCLIP11.64□□□□□ -0.55
COL12A1-206ENST00000474564 MSH4O15457 936 aa11.64□□□□□ -0.55
COL12A1-206ENST00000474564 EDNRBP24530 442 aa11.64□□□□□ -0.55
COL12A1-206ENST00000474564 SYKP43405 635 aa11.64□□□□□ -0.55
COL12A1-206ENST00000474564 JAK3P52333 1124 aa11.64□□□□□ -0.55
COL12A1-206ENST00000474564 ZRSR1Q15695 479 aaKnown RBP11.64□□□□□ -0.55
COL12A1-206ENST00000474564 KLHL40Q2TBA0 621 aa11.64□□□□□ -0.55
COL12A1-206ENST00000474564 BRDTQ58F21 947 aaPredicted RBP11.64□□□□□ -0.55
COL12A1-206ENST00000474564 RESP18Q5W5W9 173 aa11.64□□□□□ -0.55
COL12A1-206ENST00000474564 IQSEC1Q6DN90 963 aa11.64□□□□□ -0.55
COL12A1-206ENST00000474564 CAVIN1Q6NZI2 390 aaKnown RBP11.64□□□□□ -0.55
COL12A1-206ENST00000474564 MIER3Q7Z3K6 550 aa11.64□□□□□ -0.55
COL12A1-206ENST00000474564 CEP57L1Q8IYX8 460 aa11.64□□□□□ -0.55
COL12A1-206ENST00000474564 IQUBQ8NA54 791 aa11.64□□□□□ -0.55
COL12A1-206ENST00000474564 RDM1Q8NG50 284 aa11.64□□□□□ -0.55
COL12A1-206ENST00000474564 IL31RAQ8NI17 732 aa11.64□□□□□ -0.55
COL12A1-206ENST00000474564 RAET1EQ8TD07 263 aa11.64□□□□□ -0.55
COL12A1-206ENST00000474564 NEK9Q8TD19 979 aa11.64□□□□□ -0.55
COL12A1-206ENST00000474564 MORC4Q8TE76 937 aa11.64□□□□□ -0.55
COL12A1-206ENST00000474564 TMEM60Q9H2L4 133 aa11.64□□□□□ -0.55
COL12A1-206ENST00000474564 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.64□□□□□ -0.55
COL12A1-206ENST00000474564 NRBP1Q9UHY1 535 aa11.64□□□□□ -0.55
COL12A1-206ENST00000474564 KCNH3Q9ULD8 1083 aa11.64□□□□□ -0.55
COL12A1-206ENST00000474564 NFASCO94856 1347 aa11.63□□□□□ -0.55
COL12A1-206ENST00000474564 NOP56O00567 594 aaKnown RBP11.63□□□□□ -0.55
COL12A1-206ENST00000474564 LETM1O95202 739 aaPredicted RBP11.63□□□□□ -0.55
COL12A1-206ENST00000474564 ARP10275 920 aa11.63□□□□□ -0.55
COL12A1-206ENST00000474564 TXNP10599 105 aaKnown RBP11.63□□□□□ -0.55
COL12A1-206ENST00000474564 FLT3LGP49771 235 aa11.63□□□□□ -0.55
COL12A1-206ENST00000474564 AMPD3Q01432 767 aa11.63□□□□□ -0.55
COL12A1-206ENST00000474564 FAM160A1Q05DH4 1040 aa11.63□□□□□ -0.55
COL12A1-206ENST00000474564 PPP2R5CQ13362 524 aa11.63□□□□□ -0.55
COL12A1-206ENST00000474564 RRAGBQ5VZM2 374 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms