RNA–Protein interactions for RNA: ENST00000474190.1

CASC3-204, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-204ENST00000474190 ABHD16BQ9H3Z7 469 aa11.81□□□□□ -0.52
CASC3-204ENST00000474190 VTA1Q9NP79 307 aa11.81□□□□□ -0.52
CASC3-204ENST00000474190 KCNMB3Q9NPA1 279 aa11.81□□□□□ -0.52
CASC3-204ENST00000474190 PAK6Q9NQU5 681 aaPredicted RBP11.81□□□□□ -0.52
CASC3-204ENST00000474190 SLC5A4Q9NY91 659 aa11.81□□□□□ -0.52
CASC3-204ENST00000474190 NRBP1Q9UHY1 535 aa11.81□□□□□ -0.52
CASC3-204ENST00000474190 DDX41Q9UJV9 622 aaKnown RBP11.81□□□□□ -0.52
CASC3-204ENST00000474190 KIF3AQ9Y496 699 aa11.81□□□□□ -0.52
CASC3-204ENST00000474190 PCDHB6Q9Y5E3 794 aa11.81□□□□□ -0.52
CASC3-204ENST00000474190 MRVI1Q9Y6F6 885 aa11.81□□□□□ -0.52
CASC3-204ENST00000474190 CCDC194A0A1B0GVG4 234 aa11.8□□□□□ -0.52
CASC3-204ENST00000474190 H3BQV1 296 aa11.8□□□□□ -0.52
CASC3-204ENST00000474190 MSH4O15457 936 aa11.8□□□□□ -0.52
CASC3-204ENST00000474190 F13A1P00488 732 aa11.8□□□□□ -0.52
CASC3-204ENST00000474190 UBA1P22314 1058 aaKnown RBP11.8□□□□□ -0.52
CASC3-204ENST00000474190 MNX1P50219 401 aaPredicted RBP11.8□□□□□ -0.52
CASC3-204ENST00000474190 FXR1P51114 621 aaKnown RBP eCLIP11.8□□□□□ -0.52
CASC3-204ENST00000474190 NKX3-2P78367 333 aa11.8□□□□□ -0.52
CASC3-204ENST00000474190 PDE4DQ08499 809 aa11.8□□□□□ -0.52
CASC3-204ENST00000474190 SPIRE1Q08AE8 756 aa11.8□□□□□ -0.52
CASC3-204ENST00000474190 PTPAQ15257 358 aa11.8□□□□□ -0.52
CASC3-204ENST00000474190 IL17AQ16552 155 aa11.8□□□□□ -0.52
CASC3-204ENST00000474190 CCDC144BQ3MJ40 725 aa11.8□□□□□ -0.52
CASC3-204ENST00000474190 UNC93B1Q9H1C4 597 aa11.8□□□□□ -0.52
CASC3-204ENST00000474190 AGO4Q9HCK5 861 aaKnown RBP11.8□□□□□ -0.52
CASC3-204ENST00000474190 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.8□□□□□ -0.52
CASC3-204ENST00000474190 KCNH7Q9NS40 1196 aa11.8□□□□□ -0.52
CASC3-204ENST00000474190 RBBP6Q7Z6E9 1792 aaKnown RBP11.79□□□□□ -0.52
CASC3-204ENST00000474190 SZT2Q5T011 3432 aa11.79□□□□□ -0.52
CASC3-204ENST00000474190 STAM2O75886 525 aa11.79□□□□□ -0.52
CASC3-204ENST00000474190 HSP90AA1P07900 732 aaKnown RBP11.79□□□□□ -0.52
CASC3-204ENST00000474190 TRAPPC10P48553 1259 aa11.79□□□□□ -0.52
CASC3-204ENST00000474190 ARHGAP1Q07960 439 aa11.79□□□□□ -0.52
CASC3-204ENST00000474190 SAFBQ15424 915 aaKnown RBP eCLIP11.79□□□□□ -0.52
CASC3-204ENST00000474190 LY6KQ17RY6 165 aa11.79□□□□□ -0.52
CASC3-204ENST00000474190 LETM2Q2VYF4 491 aa11.79□□□□□ -0.52
CASC3-204ENST00000474190 FOXD4L5Q5VV16 416 aaPredicted RBP11.79□□□□□ -0.52
CASC3-204ENST00000474190 MFSD14CQ5VZR4 134 aa11.79□□□□□ -0.52
CASC3-204ENST00000474190 MCTP1Q6DN14 999 aa11.79□□□□□ -0.52
CASC3-204ENST00000474190 CCSAPQ6IQ19 270 aaPredicted RBP11.79□□□□□ -0.52
CASC3-204ENST00000474190 SEPT14Q6ZU15 432 aa11.79□□□□□ -0.52
CASC3-204ENST00000474190 BRAPQ7Z569 592 aa11.79□□□□□ -0.52
CASC3-204ENST00000474190 POTEDQ86YR6 584 aa11.79□□□□□ -0.52
CASC3-204ENST00000474190 FOXD4L4Q8WXT5 416 aaPredicted RBP11.79□□□□□ -0.52
CASC3-204ENST00000474190 GPRASP2Q96D09 838 aa11.79□□□□□ -0.52
CASC3-204ENST00000474190 UIMC1Q96RL1 719 aa11.79□□□□□ -0.52
CASC3-204ENST00000474190 BRMS1Q9HCU9 246 aa11.79□□□□□ -0.52
CASC3-204ENST00000474190 MYH6P13533 1939 aa11.79□□□□□ -0.52
CASC3-204ENST00000474190 ZNFX1Q9P2E3 1918 aaKnown RBP11.79□□□□□ -0.52
CASC3-204ENST00000474190 MYADML2A6NDP7 307 aa11.78□□□□□ -0.52
CASC3-204ENST00000474190 SEPT4O43236 478 aa11.78□□□□□ -0.52
CASC3-204ENST00000474190 FIBPO43427 364 aa11.78□□□□□ -0.52
CASC3-204ENST00000474190 PSMD10O75832 226 aa11.78□□□□□ -0.52
CASC3-204ENST00000474190 CCNE2O96020 404 aa11.78□□□□□ -0.52
CASC3-204ENST00000474190 ZNF174Q15697 407 aa11.78□□□□□ -0.52
CASC3-204ENST00000474190 DUSP28Q4G0W2 176 aa11.78□□□□□ -0.52
CASC3-204ENST00000474190 PRR16Q569H4 304 aa11.78□□□□□ -0.52
CASC3-204ENST00000474190 PLA2G4DQ86XP0 818 aa11.78□□□□□ -0.52
CASC3-204ENST00000474190 SLC5A5Q92911 643 aa11.78□□□□□ -0.52
CASC3-204ENST00000474190 USP28Q96RU2 1077 aa11.78□□□□□ -0.52
CASC3-204ENST00000474190 SENP7Q9BQF6 1050 aa11.78□□□□□ -0.52
CASC3-204ENST00000474190 VAV3Q9UKW4 847 aa11.78□□□□□ -0.52
CASC3-204ENST00000474190 ZHX1Q9UKY1 873 aaPredicted RBP11.78□□□□□ -0.52
CASC3-204ENST00000474190 CLIC4Q9Y696 253 aa11.78□□□□□ -0.52
CASC3-204ENST00000474190 CCNT1O60563 726 aaKnown RBP11.77□□□□□ -0.53
CASC3-204ENST00000474190 ADAMTS4O75173 837 aa11.77□□□□□ -0.53
CASC3-204ENST00000474190 FARP2O94887 1054 aaPredicted RBP11.77□□□□□ -0.53
CASC3-204ENST00000474190 TGFB3P10600 412 aa11.77□□□□□ -0.53
CASC3-204ENST00000474190 HOXD8P13378 290 aaPredicted RBP11.77□□□□□ -0.53
CASC3-204ENST00000474190 CCL5P13501 91 aa11.77□□□□□ -0.53
CASC3-204ENST00000474190 GCFC2P16383 781 aaKnown RBP11.77□□□□□ -0.53
CASC3-204ENST00000474190 MTMR1Q13613 665 aa11.77□□□□□ -0.53
CASC3-204ENST00000474190 SLC9C1Q4G0N8 1177 aa11.77□□□□□ -0.53
CASC3-204ENST00000474190 TTC38Q5R3I4 469 aa11.77□□□□□ -0.53
CASC3-204ENST00000474190 ANO1Q5XXA6 986 aa11.77□□□□□ -0.53
CASC3-204ENST00000474190 IQSEC1Q6DN90 963 aa11.77□□□□□ -0.53
CASC3-204ENST00000474190 SCFD2Q8WU76 684 aa11.77□□□□□ -0.53
CASC3-204ENST00000474190 EMID1Q96A84 441 aaPredicted RBP11.77□□□□□ -0.53
CASC3-204ENST00000474190 PCYT2Q99447 389 aa11.77□□□□□ -0.53
CASC3-204ENST00000474190 CRISPLD2Q9H0B8 497 aa11.77□□□□□ -0.53
CASC3-204ENST00000474190 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.77□□□□□ -0.53
CASC3-204ENST00000474190 UPF3AQ9H1J1 476 aaKnown RBP11.77□□□□□ -0.53
CASC3-204ENST00000474190 ZSCAN16Q9H4T2 348 aaPredicted RBP11.77□□□□□ -0.53
CASC3-204ENST00000474190 DDX25Q9UHL0 483 aaKnown RBP11.77□□□□□ -0.53
CASC3-204ENST00000474190 CNPY2Q9Y2B0 182 aa11.77□□□□□ -0.53
CASC3-204ENST00000474190 DNAH12Q6ZR08 3092 aa11.76□□□□□ -0.53
CASC3-204ENST00000474190 MAFGO15525 162 aa11.76□□□□□ -0.53
CASC3-204ENST00000474190 ATP2B1P20020 1258 aa11.76□□□□□ -0.53
CASC3-204ENST00000474190 MCM7P33993 719 aa11.76□□□□□ -0.53
CASC3-204ENST00000474190 NASPP49321 788 aaPredicted RBP11.76□□□□□ -0.53
CASC3-204ENST00000474190 ATP2C1P98194 919 aaPredicted RBP11.76□□□□□ -0.53
CASC3-204ENST00000474190 TNFAIP2Q03169 654 aa11.76□□□□□ -0.53
CASC3-204ENST00000474190 GRIN1Q05586 938 aa11.76□□□□□ -0.53
CASC3-204ENST00000474190 HSDL1Q3SXM5 330 aa11.76□□□□□ -0.53
CASC3-204ENST00000474190 RILPL1Q5EBL4 403 aa11.76□□□□□ -0.53
CASC3-204ENST00000474190 CELF3Q5SZQ8 465 aaKnown RBP11.76□□□□□ -0.53
CASC3-204ENST00000474190 KLHDC9Q8NEP7 349 aa11.76□□□□□ -0.53
CASC3-204ENST00000474190 EHMT1Q9H9B1 1298 aa11.76□□□□□ -0.53
CASC3-204ENST00000474190 DDX20Q9UHI6 824 aaKnown RBP11.76□□□□□ -0.53
CASC3-204ENST00000474190 FAM184BQ9ULE4 1060 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms