RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 IFI16Q16666 785 aaKnown RBP5.64□□□□□ -1.51
BRCA1-212ENST00000473961 ATP13A4Q4VNC1 1196 aa5.64□□□□□ -1.51
BRCA1-212ENST00000473961 TMEM177Q53S58 311 aa5.64□□□□□ -1.51
BRCA1-212ENST00000473961 EP400NLQ6ZTU2 488 aa5.64□□□□□ -1.51
BRCA1-212ENST00000473961 STK11IPQ8N1F8 1099 aa5.64□□□□□ -1.51
BRCA1-212ENST00000473961 USHBP1Q8N6Y0 703 aa5.64□□□□□ -1.51
BRCA1-212ENST00000473961 CHMP4CQ96CF2 233 aa5.64□□□□□ -1.51
BRCA1-212ENST00000473961 MENTQ9BUN1 341 aa5.64□□□□□ -1.51
BRCA1-212ENST00000473961 ASPSCR1Q9BZE9 553 aa5.64□□□□□ -1.51
BRCA1-212ENST00000473961 ZSWIM5Q9P217 1185 aa5.64□□□□□ -1.51
BRCA1-212ENST00000473961 B4GALT6Q9UBX8 382 aa5.64□□□□□ -1.51
BRCA1-212ENST00000473961 PCDHA2Q9Y5H9 948 aa5.64□□□□□ -1.51
BRCA1-212ENST00000473961 TIMM13Q9Y5L4 95 aaPredicted RBP5.64□□□□□ -1.51
BRCA1-212ENST00000473961 CCDC66A2RUB6 948 aa5.63□□□□□ -1.51
BRCA1-212ENST00000473961 H3BS24 57 aa5.63□□□□□ -1.51
BRCA1-212ENST00000473961 FKBP9O95302 570 aa5.63□□□□□ -1.51
BRCA1-212ENST00000473961 SRGAP2CP0DJJ0 459 aa5.63□□□□□ -1.51
BRCA1-212ENST00000473961 U2AF1L5P0DN76 240 aaPredicted RBP5.63□□□□□ -1.51
BRCA1-212ENST00000473961 U2AF1Q01081 240 aaKnown RBP eCLIP5.63□□□□□ -1.51
BRCA1-212ENST00000473961 LAPTM5Q13571 262 aa5.63□□□□□ -1.51
BRCA1-212ENST00000473961 NFE2Q16621 373 aaPredicted RBP5.63□□□□□ -1.51
BRCA1-212ENST00000473961 SYDE2Q5VT97 1194 aa5.63□□□□□ -1.51
BRCA1-212ENST00000473961 HLA-DQA1Q5Y7H0 255 aa5.63□□□□□ -1.51
BRCA1-212ENST00000473961 CCSAPQ6IQ19 270 aaPredicted RBP5.63□□□□□ -1.51
BRCA1-212ENST00000473961 FKBP9P1Q75LS8 142 aa5.63□□□□□ -1.51
BRCA1-212ENST00000473961 C16orf59Q7L2K0 433 aa5.63□□□□□ -1.51
BRCA1-212ENST00000473961 CNTD1Q8N815 330 aa5.63□□□□□ -1.51
BRCA1-212ENST00000473961 C2orf69Q8N8R5 385 aa5.63□□□□□ -1.51
BRCA1-212ENST00000473961 RCBTB1Q8NDN9 531 aa5.63□□□□□ -1.51
BRCA1-212ENST00000473961 SMC1BQ8NDV3 1235 aa5.63□□□□□ -1.51
BRCA1-212ENST00000473961 PCDH19Q8TAB3 1148 aa5.63□□□□□ -1.51
BRCA1-212ENST00000473961 UBE2FQ969M7 185 aa5.63□□□□□ -1.51
BRCA1-212ENST00000473961 FCRL2Q96LA5 508 aaPredicted RBP5.63□□□□□ -1.51
BRCA1-212ENST00000473961 HSPA12BQ96MM6 686 aa5.63□□□□□ -1.51
BRCA1-212ENST00000473961 SMAD5Q99717 465 aaKnown RBP5.63□□□□□ -1.51
BRCA1-212ENST00000473961 FOXP3Q9BZS1 431 aa5.63□□□□□ -1.51
BRCA1-212ENST00000473961 CATSPERZQ9NTU4 200 aa5.63□□□□□ -1.51
BRCA1-212ENST00000473961 AP5S1Q9NUS5 200 aa5.63□□□□□ -1.51
BRCA1-212ENST00000473961 THRAP3Q9Y2W1 955 aaKnown RBP5.63□□□□□ -1.51
BRCA1-212ENST00000473961 COQ6Q9Y2Z9 468 aa5.63□□□□□ -1.51
BRCA1-212ENST00000473961 NUB1Q9Y5A7 615 aa5.63□□□□□ -1.51
BRCA1-212ENST00000473961 CCDC194A0A1B0GVG4 234 aa5.62□□□□□ -1.51
BRCA1-212ENST00000473961 GOLGA6CA6NDK9 693 aa5.62□□□□□ -1.51
BRCA1-212ENST00000473961 GOLGA6BA6NDN3 693 aa5.62□□□□□ -1.51
BRCA1-212ENST00000473961 H7BY64 318 aa5.62□□□□□ -1.51
BRCA1-212ENST00000473961 FKTNO75072 461 aa5.62□□□□□ -1.51
BRCA1-212ENST00000473961 GOLGA6DP0CG33 693 aa5.62□□□□□ -1.51
BRCA1-212ENST00000473961 DNM2P50570 870 aa5.62□□□□□ -1.51
BRCA1-212ENST00000473961 SESN3P58005 492 aa5.62□□□□□ -1.51
BRCA1-212ENST00000473961 DSG1Q02413 1049 aa5.62□□□□□ -1.51
BRCA1-212ENST00000473961 SPIRE1Q08AE8 756 aa5.62□□□□□ -1.51
BRCA1-212ENST00000473961 BNIP3Q12983 259 aa5.62□□□□□ -1.51
BRCA1-212ENST00000473961 PIN1Q13526 163 aaPredicted RBP5.62□□□□□ -1.51
BRCA1-212ENST00000473961 HLTFQ14527 1009 aaKnown RBP eCLIP5.62□□□□□ -1.51
BRCA1-212ENST00000473961 MLANAQ16655 118 aa5.62□□□□□ -1.51
BRCA1-212ENST00000473961 RTP2Q5QGT7 225 aa5.62□□□□□ -1.51
BRCA1-212ENST00000473961 CCDC103Q8IW40 242 aa5.62□□□□□ -1.51
BRCA1-212ENST00000473961 WDR75Q8IWA0 830 aaKnown RBP5.62□□□□□ -1.51
BRCA1-212ENST00000473961 SPACA3Q8IXA5 215 aa5.62□□□□□ -1.51
BRCA1-212ENST00000473961 NETO1Q8TDF5 533 aa5.62□□□□□ -1.51
BRCA1-212ENST00000473961 ASB11Q8WXH4 323 aa5.62□□□□□ -1.51
BRCA1-212ENST00000473961 CAMKK2Q96RR4 588 aa5.62□□□□□ -1.51
BRCA1-212ENST00000473961 PPP1R16BQ96T49 567 aa5.62□□□□□ -1.51
BRCA1-212ENST00000473961 AASDHPPTQ9NRN7 309 aa5.62□□□□□ -1.51
BRCA1-212ENST00000473961 GOLGA6AQ9NYA3 693 aa5.62□□□□□ -1.51
BRCA1-212ENST00000473961 FAM53CQ9NYF3 392 aa5.62□□□□□ -1.51
BRCA1-212ENST00000473961 TMEFF2Q9UIK5 374 aaPredicted RBP5.62□□□□□ -1.51
BRCA1-212ENST00000473961 WASHC2AQ641Q2 1341 aa5.62□□□□□ -1.51
BRCA1-212ENST00000473961 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.61□□□□□ -1.51
BRCA1-212ENST00000473961 PTPDC1A2A3K4 754 aa5.61□□□□□ -1.51
BRCA1-212ENST00000473961 H7C1D1 291 aa5.61□□□□□ -1.51
BRCA1-212ENST00000473961 TSPAN6O43657 245 aa5.61□□□□□ -1.51
BRCA1-212ENST00000473961 HIP1RO75146 1068 aa5.61□□□□□ -1.51
BRCA1-212ENST00000473961 FBXO21O94952 628 aa5.61□□□□□ -1.51
BRCA1-212ENST00000473961 KCNA6P17658 529 aa5.61□□□□□ -1.51
BRCA1-212ENST00000473961 RPL10P27635 214 aaKnown RBP5.61□□□□□ -1.51
BRCA1-212ENST00000473961 TBX4P57082 545 aa5.61□□□□□ -1.51
BRCA1-212ENST00000473961 MCL1Q07820 350 aa5.61□□□□□ -1.51
BRCA1-212ENST00000473961 DUSP4Q13115 394 aa5.61□□□□□ -1.51
BRCA1-212ENST00000473961 ZNF174Q15697 407 aa5.61□□□□□ -1.51
BRCA1-212ENST00000473961 NKPD1Q17RQ9 610 aa5.61□□□□□ -1.51
BRCA1-212ENST00000473961 GAB4Q2WGN9 574 aa5.61□□□□□ -1.51
BRCA1-212ENST00000473961 ABHD17CQ6PCB6 329 aa5.61□□□□□ -1.51
BRCA1-212ENST00000473961 WAPLQ7Z5K2 1190 aa5.61□□□□□ -1.51
BRCA1-212ENST00000473961 CREG2Q8IUH2 290 aa5.61□□□□□ -1.51
BRCA1-212ENST00000473961 CCDC146Q8IYE0 955 aa5.61□□□□□ -1.51
BRCA1-212ENST00000473961 TMEM169Q96HH4 297 aa5.61□□□□□ -1.51
BRCA1-212ENST00000473961 GPR101Q96P66 508 aaPredicted RBP5.61□□□□□ -1.51
BRCA1-212ENST00000473961 PSMD1Q99460 953 aa5.61□□□□□ -1.51
BRCA1-212ENST00000473961 THG1LQ9NWX6 298 aaKnown RBP5.61□□□□□ -1.51
BRCA1-212ENST00000473961 CLDND1Q9NY35 253 aa5.61□□□□□ -1.51
BRCA1-212ENST00000473961 TRHDEQ9UKU6 1024 aa5.61□□□□□ -1.51
BRCA1-212ENST00000473961 COA3Q9Y2R0 106 aaPredicted RBP5.61□□□□□ -1.51
BRCA1-212ENST00000473961 ZNF503-AS2A6NEH8 195 aa5.6□□□□□ -1.51
BRCA1-212ENST00000473961 ZNF891A8MT65 544 aaPredicted RBP5.6□□□□□ -1.51
BRCA1-212ENST00000473961 PLIN1O60240 522 aa5.6□□□□□ -1.51
BRCA1-212ENST00000473961 MSCO60682 206 aa5.6□□□□□ -1.51
BRCA1-212ENST00000473961 CKMP06732 381 aa5.6□□□□□ -1.51
BRCA1-212ENST00000473961 CT47B1P0C2W7 299 aaPredicted RBP5.6□□□□□ -1.51
BRCA1-212ENST00000473961 GNAT1P11488 350 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms