RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 GPRASP2Q96D09 838 aa14.15□□□□□ -0.14
DDX56-209ENST00000473924 MXRA8Q9BRK3 442 aa14.15□□□□□ -0.14
DDX56-209ENST00000473924 UBIAD1Q9Y5Z9 338 aa14.15□□□□□ -0.14
DDX56-209ENST00000473924 MYADML2A6NDP7 307 aa14.14□□□□□ -0.15
DDX56-209ENST00000473924 SPATA31C2B4DYI2 1134 aa14.14□□□□□ -0.15
DDX56-209ENST00000473924 M0R2N6 131 aa14.14□□□□□ -0.15
DDX56-209ENST00000473924 SORBS3O60504 671 aa14.14□□□□□ -0.15
DDX56-209ENST00000473924 ITGB5P18084 799 aa14.14□□□□□ -0.15
DDX56-209ENST00000473924 CST5P28325 142 aaPredicted RBP14.14□□□□□ -0.15
DDX56-209ENST00000473924 GJB2P29033 226 aa14.14□□□□□ -0.15
DDX56-209ENST00000473924 ICAM3P32942 547 aa14.14□□□□□ -0.15
DDX56-209ENST00000473924 RGS19P49795 217 aa14.14□□□□□ -0.15
DDX56-209ENST00000473924 IRX5P78411 483 aaPredicted RBP14.14□□□□□ -0.15
DDX56-209ENST00000473924 GNL2Q13823 731 aaKnown RBP14.14□□□□□ -0.15
DDX56-209ENST00000473924 NPY5RQ15761 445 aa14.14□□□□□ -0.15
DDX56-209ENST00000473924 KCNA10Q16322 511 aa14.14□□□□□ -0.15
DDX56-209ENST00000473924 CEP55Q53EZ4 464 aa14.14□□□□□ -0.15
DDX56-209ENST00000473924 KLHDC9Q8NEP7 349 aa14.14□□□□□ -0.15
DDX56-209ENST00000473924 OXER1Q8TDS5 423 aa14.14□□□□□ -0.15
DDX56-209ENST00000473924 TBCKQ8TEA7 893 aa14.14□□□□□ -0.15
DDX56-209ENST00000473924 FERMT2Q96AC1 680 aa14.14□□□□□ -0.15
DDX56-209ENST00000473924 TSEN34Q9BSV6 310 aaKnown RBP14.14□□□□□ -0.15
DDX56-209ENST00000473924 SENP6Q9GZR1 1112 aaPredicted RBP14.14□□□□□ -0.15
DDX56-209ENST00000473924 MLXIPQ9HAP2 919 aa14.14□□□□□ -0.15
DDX56-209ENST00000473924 JADE2Q9NQC1 790 aa14.14□□□□□ -0.15
DDX56-209ENST00000473924 BRCA2P51587 3418 aa14.13□□□□□ -0.15
DDX56-209ENST00000473924 MOXD2PA6NHM9 499 aa14.13□□□□□ -0.15
DDX56-209ENST00000473924 MAFGO15525 162 aa14.13□□□□□ -0.15
DDX56-209ENST00000473924 GGPS1O95749 300 aa14.13□□□□□ -0.15
DDX56-209ENST00000473924 ASGR1P07306 291 aa14.13□□□□□ -0.15
DDX56-209ENST00000473924 CYP3A4P08684 503 aa14.13□□□□□ -0.15
DDX56-209ENST00000473924 UBA1P22314 1058 aaKnown RBP14.13□□□□□ -0.15
DDX56-209ENST00000473924 MNX1P50219 401 aaPredicted RBP14.13□□□□□ -0.15
DDX56-209ENST00000473924 ACLYP53396 1101 aa14.13□□□□□ -0.15
DDX56-209ENST00000473924 SP2Q02086 613 aa14.13□□□□□ -0.15
DDX56-209ENST00000473924 CUL4AQ13619 759 aa14.13□□□□□ -0.15
DDX56-209ENST00000473924 LAMC2Q13753 1193 aa14.13□□□□□ -0.15
DDX56-209ENST00000473924 NEDD9Q14511 834 aa14.13□□□□□ -0.15
DDX56-209ENST00000473924 DIS3L2Q8IYB7 885 aaKnown RBP14.13□□□□□ -0.15
DDX56-209ENST00000473924 GIMAP8Q8ND71 665 aaPredicted RBP14.13□□□□□ -0.15
DDX56-209ENST00000473924 SNX21Q969T3 373 aa14.13□□□□□ -0.15
DDX56-209ENST00000473924 VTI1AQ96AJ9 217 aa14.13□□□□□ -0.15
DDX56-209ENST00000473924 HTATIP2Q9BUP3 242 aa14.13□□□□□ -0.15
DDX56-209ENST00000473924 PKD2L1Q9P0L9 805 aa14.13□□□□□ -0.15
DDX56-209ENST00000473924 PHF24Q9UPV7 400 aa14.13□□□□□ -0.15
DDX56-209ENST00000473924 BTBD18B2RXH4 712 aa14.12□□□□□ -0.15
DDX56-209ENST00000473924 CTAGE5O15320 804 aa14.12□□□□□ -0.15
DDX56-209ENST00000473924 USP11P51784 963 aa14.12□□□□□ -0.15
DDX56-209ENST00000473924 NKX3-2P78367 333 aa14.12□□□□□ -0.15
DDX56-209ENST00000473924 MLLT1Q03111 559 aaPredicted RBP14.12□□□□□ -0.15
DDX56-209ENST00000473924 ARHGAP1Q07960 439 aa14.12□□□□□ -0.15
DDX56-209ENST00000473924 SEMA3FQ13275 785 aa14.12□□□□□ -0.15
DDX56-209ENST00000473924 NR5A1Q13285 461 aa14.12□□□□□ -0.15
DDX56-209ENST00000473924 INF2Q27J81 1249 aa14.12□□□□□ -0.15
DDX56-209ENST00000473924 CELF3Q5SZQ8 465 aaKnown RBP14.12□□□□□ -0.15
DDX56-209ENST00000473924 PIK3AP1Q6ZUJ8 805 aa14.12□□□□□ -0.15
DDX56-209ENST00000473924 CYFIP1Q7L576 1253 aa14.12□□□□□ -0.15
DDX56-209ENST00000473924 UBE2Q1Q7Z7E8 422 aa14.12□□□□□ -0.15
DDX56-209ENST00000473924 PLA2G4DQ86XP0 818 aa14.12□□□□□ -0.15
DDX56-209ENST00000473924 FBXO18Q8NFZ0 1043 aa14.12□□□□□ -0.15
DDX56-209ENST00000473924 CYP2W1Q8TAV3 490 aa14.12□□□□□ -0.15
DDX56-209ENST00000473924 AFG1LQ8WV93 481 aa14.12□□□□□ -0.15
DDX56-209ENST00000473924 CRYGNQ8WXF5 182 aa14.12□□□□□ -0.15
DDX56-209ENST00000473924 GLT1D1Q96MS3 346 aa14.12□□□□□ -0.15
DDX56-209ENST00000473924 SPATA33Q96N06 139 aa14.12□□□□□ -0.15
DDX56-209ENST00000473924 SENP7Q9BQF6 1050 aa14.12□□□□□ -0.15
DDX56-209ENST00000473924 KCNH7Q9NS40 1196 aa14.12□□□□□ -0.15
DDX56-209ENST00000473924 POLR3EQ9NVU0 708 aa14.12□□□□□ -0.15
DDX56-209ENST00000473924 MYH7BA7E2Y1 1941 aa14.11□□□□□ -0.15
DDX56-209ENST00000473924 A0A1W2PQ45 241 aaPredicted RBP14.11□□□□□ -0.15
DDX56-209ENST00000473924 A0A1W2PQY0 241 aa14.11□□□□□ -0.15
DDX56-209ENST00000473924 A6NJR5 290 aa14.11□□□□□ -0.15
DDX56-209ENST00000473924 FAM86B1E9PN63 330 aa14.11□□□□□ -0.15
DDX56-209ENST00000473924 MEIS1O00470 390 aa14.11□□□□□ -0.15
DDX56-209ENST00000473924 NOP56O00567 594 aaKnown RBP14.11□□□□□ -0.15
DDX56-209ENST00000473924 HSP90AA1P07900 732 aaKnown RBP14.11□□□□□ -0.15
DDX56-209ENST00000473924 MYL3P08590 195 aa14.11□□□□□ -0.15
DDX56-209ENST00000473924 FAM86B2P0C5J1 330 aa14.11□□□□□ -0.15
DDX56-209ENST00000473924 ARP10275 920 aa14.11□□□□□ -0.15
DDX56-209ENST00000473924 COL6A1P12109 1028 aa14.11□□□□□ -0.15
DDX56-209ENST00000473924 SETQ01105 290 aaPredicted RBP14.11□□□□□ -0.15
DDX56-209ENST00000473924 SP4Q02446 784 aa14.11□□□□□ -0.15
DDX56-209ENST00000473924 LETM2Q2VYF4 491 aa14.11□□□□□ -0.15
DDX56-209ENST00000473924 PRR16Q569H4 304 aa14.11□□□□□ -0.15
DDX56-209ENST00000473924 MYSM1Q5VVJ2 828 aa14.11□□□□□ -0.15
DDX56-209ENST00000473924 CCSAPQ6IQ19 270 aaPredicted RBP14.11□□□□□ -0.15
DDX56-209ENST00000473924 CXCL17Q6UXB2 119 aa14.11□□□□□ -0.15
DDX56-209ENST00000473924 NIPA1Q7RTP0 329 aa14.11□□□□□ -0.15
DDX56-209ENST00000473924 EMID1Q96A84 441 aaPredicted RBP14.11□□□□□ -0.15
DDX56-209ENST00000473924 STARD7Q9NQZ5 370 aa14.11□□□□□ -0.15
DDX56-209ENST00000473924 FOXD4L1Q9NU39 408 aa14.11□□□□□ -0.15
DDX56-209ENST00000473924 H3BQV1 296 aa14.1□□□□□ -0.15
DDX56-209ENST00000473924 KPNA6O60684 536 aa14.1□□□□□ -0.15
DDX56-209ENST00000473924 ATP9AO75110 1047 aa14.1□□□□□ -0.15
DDX56-209ENST00000473924 CABYRO75952 493 aa14.1□□□□□ -0.15
DDX56-209ENST00000473924 MMP3P08254 477 aa14.1□□□□□ -0.15
DDX56-209ENST00000473924 CIITAP33076 1130 aa14.1□□□□□ -0.15
DDX56-209ENST00000473924 ATN1P54259 1190 aaPredicted RBP14.1□□□□□ -0.15
DDX56-209ENST00000473924 DGKDQ16760 1214 aa14.1□□□□□ -0.15
DDX56-209ENST00000473924 LARP1BQ659C4 914 aaKnown RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms