RNA–Protein interactions for RNA: ENST00000473343.5

TNFRSF25-211, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 2

Gene TNFRSF25, Length 1,591 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-211ENST00000473343 MSL3Q8N5Y2 521 aaKnown RBP21.42■■□□□ 1.02
TNFRSF25-211ENST00000473343 CD99L2Q8TCZ2 262 aa21.42■■□□□ 1.02
TNFRSF25-211ENST00000473343 DDX11L8A8MPP1 907 aa21.41■■□□□ 1.02
TNFRSF25-211ENST00000473343 MAFGO15525 162 aa21.41■■□□□ 1.02
TNFRSF25-211ENST00000473343 MARCH6O60337 910 aa21.41■■□□□ 1.02
TNFRSF25-211ENST00000473343 CUTAO60888 179 aa21.41■■□□□ 1.02
TNFRSF25-211ENST00000473343 CYP2B6P20813 491 aa21.41■■□□□ 1.02
TNFRSF25-211ENST00000473343 GRIN1Q05586 938 aa21.41■■□□□ 1.02
TNFRSF25-211ENST00000473343 GNPTABQ3T906 1256 aa21.41■■□□□ 1.02
TNFRSF25-211ENST00000473343 ADALQ6DHV7 355 aa21.41■■□□□ 1.02
TNFRSF25-211ENST00000473343 ZNF296Q8WUU4 475 aaPredicted RBP21.41■■□□□ 1.02
TNFRSF25-211ENST00000473343 ERO1AQ96HE7 468 aa21.41■■□□□ 1.02
TNFRSF25-211ENST00000473343 CDHR1Q96JP9 859 aa21.41■■□□□ 1.02
TNFRSF25-211ENST00000473343 CLIC6Q96NY7 704 aa21.41■■□□□ 1.02
TNFRSF25-211ENST00000473343 AGO4Q9HCK5 861 aaKnown RBP21.41■■□□□ 1.02
TNFRSF25-211ENST00000473343 SYNGAP1Q96PV0 1343 aa21.41■■□□□ 1.02
TNFRSF25-211ENST00000473343 VWA3AA6NCI4 1184 aa21.4■■□□□ 1.02
TNFRSF25-211ENST00000473343 XRCC5P13010 732 aaKnown RBP21.4■■□□□ 1.02
TNFRSF25-211ENST00000473343 ICAM3P32942 547 aa21.4■■□□□ 1.02
TNFRSF25-211ENST00000473343 TXKP42681 527 aa21.4■■□□□ 1.02
TNFRSF25-211ENST00000473343 SEMA3FQ13275 785 aa21.4■■□□□ 1.02
TNFRSF25-211ENST00000473343 NFKBIBQ15653 356 aa21.4■■□□□ 1.02
TNFRSF25-211ENST00000473343 ZNF579Q8NAF0 562 aaKnown RBP21.4■■□□□ 1.02
TNFRSF25-211ENST00000473343 SLC5A5Q92911 643 aa21.4■■□□□ 1.02
TNFRSF25-211ENST00000473343 GJA10Q969M2 543 aa21.4■■□□□ 1.02
TNFRSF25-211ENST00000473343 TINF2Q9BSI4 451 aa21.4■■□□□ 1.02
TNFRSF25-211ENST00000473343 ZNF577Q9BSK1 485 aa21.4■■□□□ 1.02
TNFRSF25-211ENST00000473343 TTC12Q9H892 705 aaPredicted RBP21.4■■□□□ 1.02
TNFRSF25-211ENST00000473343 GABRQQ9UN88 632 aa21.4■■□□□ 1.02
TNFRSF25-211ENST00000473343 CEP350Q5VT06 3117 aa21.4■■□□□ 1.02
TNFRSF25-211ENST00000473343 MGAMO43451 1857 aa21.4■■□□□ 1.02
TNFRSF25-211ENST00000473343 GADD45BO75293 160 aaPredicted RBP21.4■■□□□ 1.02
TNFRSF25-211ENST00000473343 FLT3LGP49771 235 aa21.4■■□□□ 1.02
TNFRSF25-211ENST00000473343 FXR2P51116 673 aaKnown RBP eCLIP21.4■■□□□ 1.02
TNFRSF25-211ENST00000473343 UBE2HP62256 183 aa21.4■■□□□ 1.02
TNFRSF25-211ENST00000473343 PRKCZQ05513 592 aa21.4■■□□□ 1.02
TNFRSF25-211ENST00000473343 OLFML2BQ68BL8 750 aa21.4■■□□□ 1.02
TNFRSF25-211ENST00000473343 UIMC1Q96RL1 719 aa21.4■■□□□ 1.02
TNFRSF25-211ENST00000473343 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.4■■□□□ 1.02
TNFRSF25-211ENST00000473343 TSKSQ9UJT2 592 aa21.4■■□□□ 1.02
TNFRSF25-211ENST00000473343 DOCK3Q8IZD9 2030 aa21.39■■□□□ 1.02
TNFRSF25-211ENST00000473343 ZSWIM8A7E2V4 1837 aa21.39■■□□□ 1.01
TNFRSF25-211ENST00000473343 GOLGA6L4A6NEF3 574 aa21.39■■□□□ 1.01
TNFRSF25-211ENST00000473343 SPATA31C2B4DYI2 1134 aa21.39■■□□□ 1.01
TNFRSF25-211ENST00000473343 IPO5O00410 1097 aaKnown RBP21.39■■□□□ 1.01
TNFRSF25-211ENST00000473343 GNRH1P01148 92 aa21.39■■□□□ 1.01
TNFRSF25-211ENST00000473343 EEPD1Q7L9B9 569 aa21.39■■□□□ 1.01
TNFRSF25-211ENST00000473343 FBXO16Q8IX29 292 aaPredicted RBP21.39■■□□□ 1.01
TNFRSF25-211ENST00000473343 CSRNP2Q9H175 543 aa21.39■■□□□ 1.01
TNFRSF25-211ENST00000473343 FLRT1Q9NZU1 646 aa21.39■■□□□ 1.01
TNFRSF25-211ENST00000473343 PCDHA12Q9UN75 941 aa21.39■■□□□ 1.01
TNFRSF25-211ENST00000473343 PLXNA1Q9UIW2 1896 aa21.39■■□□□ 1.01
TNFRSF25-211ENST00000473343 LRRC37A2A6NM11 1700 aa21.38■■□□□ 1.01
TNFRSF25-211ENST00000473343 A0A1W2PQ27 194 aa21.38■■□□□ 1.01
TNFRSF25-211ENST00000473343 A0A1W2PQ64 194 aa21.38■■□□□ 1.01
TNFRSF25-211ENST00000473343 A0A1W2PQD8 194 aa21.38■■□□□ 1.01
TNFRSF25-211ENST00000473343 SNAI1O95863 264 aaPredicted RBP21.38■■□□□ 1.01
TNFRSF25-211ENST00000473343 IGHA2P01877 340 aa21.38■■□□□ 1.01
TNFRSF25-211ENST00000473343 HOXD10P28358 340 aa21.38■■□□□ 1.01
TNFRSF25-211ENST00000473343 LONP1P36776 959 aaKnown RBP21.38■■□□□ 1.01
TNFRSF25-211ENST00000473343 TECP42680 631 aa21.38■■□□□ 1.01
TNFRSF25-211ENST00000473343 CCL14Q16627 93 aa21.38■■□□□ 1.01
TNFRSF25-211ENST00000473343 TMEM266Q2M3C6 531 aa21.38■■□□□ 1.01
TNFRSF25-211ENST00000473343 SEPT14Q6ZU15 432 aa21.38■■□□□ 1.01
TNFRSF25-211ENST00000473343 IGSF22Q8N9C0 903 aa21.38■■□□□ 1.01
TNFRSF25-211ENST00000473343 RIT2Q99578 217 aa21.38■■□□□ 1.01
TNFRSF25-211ENST00000473343 KATNBL1Q9H079 304 aa21.38■■□□□ 1.01
TNFRSF25-211ENST00000473343 VTA1Q9NP79 307 aa21.38■■□□□ 1.01
TNFRSF25-211ENST00000473343 SRRDQ9UH36 339 aa21.38■■□□□ 1.01
TNFRSF25-211ENST00000473343 ATP9AO75110 1047 aa21.37■■□□□ 1.01
TNFRSF25-211ENST00000473343 PSMD10O75832 226 aa21.37■■□□□ 1.01
TNFRSF25-211ENST00000473343 ITGB3BPQ13352 177 aaPredicted RBP21.37■■□□□ 1.01
TNFRSF25-211ENST00000473343 ARHGEF6Q15052 776 aa21.37■■□□□ 1.01
TNFRSF25-211ENST00000473343 LRCH2Q5VUJ6 765 aa21.37■■□□□ 1.01
TNFRSF25-211ENST00000473343 SHC4Q6S5L8 630 aa21.37■■□□□ 1.01
TNFRSF25-211ENST00000473343 DHX15O43143 795 aaKnown RBP21.36■■□□□ 1.01
TNFRSF25-211ENST00000473343 TGFB3P10600 412 aa21.36■■□□□ 1.01
TNFRSF25-211ENST00000473343 KCNA2P16389 499 aa21.36■■□□□ 1.01
TNFRSF25-211ENST00000473343 CMA1P23946 247 aa21.36■■□□□ 1.01
TNFRSF25-211ENST00000473343 PDIA5Q14554 519 aa21.36■■□□□ 1.01
TNFRSF25-211ENST00000473343 AK8Q96MA6 479 aa21.36■■□□□ 1.01
TNFRSF25-211ENST00000473343 RAB34Q9BZG1 259 aa21.36■■□□□ 1.01
TNFRSF25-211ENST00000473343 TBC1D22BQ9NU19 505 aa21.36■■□□□ 1.01
TNFRSF25-211ENST00000473343 PKD2L1Q9P0L9 805 aa21.36■■□□□ 1.01
TNFRSF25-211ENST00000473343 VAV3Q9UKW4 847 aa21.36■■□□□ 1.01
TNFRSF25-211ENST00000473343 GAS7O60861 476 aa21.36■■□□□ 1.01
TNFRSF25-211ENST00000473343 PTMSP20962 102 aa21.36■■□□□ 1.01
TNFRSF25-211ENST00000473343 SPIRE1Q08AE8 756 aa21.36■■□□□ 1.01
TNFRSF25-211ENST00000473343 IRF5Q13568 498 aa21.36■■□□□ 1.01
TNFRSF25-211ENST00000473343 TPRNQ4KMQ1 711 aa21.36■■□□□ 1.01
TNFRSF25-211ENST00000473343 SPECC1Q5M775 1068 aa21.36■■□□□ 1.01
TNFRSF25-211ENST00000473343 RESP18Q5W5W9 173 aa21.36■■□□□ 1.01
TNFRSF25-211ENST00000473343 KCNV1Q6PIU1 500 aa21.36■■□□□ 1.01
TNFRSF25-211ENST00000473343 OTOP1Q7RTM1 612 aa21.36■■□□□ 1.01
TNFRSF25-211ENST00000473343 TEKT3Q9BXF9 490 aa21.36■■□□□ 1.01
TNFRSF25-211ENST00000473343 ABHD16BQ9H3Z7 469 aa21.36■■□□□ 1.01
TNFRSF25-211ENST00000473343 PPP2R5CQ13362 524 aa21.35■■□□□ 1.01
TNFRSF25-211ENST00000473343 TAPT1Q6NXT6 567 aa21.35■■□□□ 1.01
TNFRSF25-211ENST00000473343 SENP7Q9BQF6 1050 aa21.35■■□□□ 1.01
TNFRSF25-211ENST00000473343 NFASCO94856 1347 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms