RNA–Protein interactions for RNA: ENST00000472806.1

CCDC171-205, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-205ENST00000472806 LRRC47Q8N1G4 583 aaKnown RBP8.55□□□□□ -1.04
CCDC171-205ENST00000472806 CERS5Q8N5B7 392 aa8.55□□□□□ -1.04
CCDC171-205ENST00000472806 IGSF22Q8N9C0 903 aa8.55□□□□□ -1.04
CCDC171-205ENST00000472806 GIMAP8Q8ND71 665 aaPredicted RBP8.55□□□□□ -1.04
CCDC171-205ENST00000472806 MKL1Q969V6 931 aa8.55□□□□□ -1.04
CCDC171-205ENST00000472806 BLZF1Q9H2G9 400 aa8.55□□□□□ -1.04
CCDC171-205ENST00000472806 TMEM60Q9H2L4 133 aa8.55□□□□□ -1.04
CCDC171-205ENST00000472806 TMOD2Q9NZR1 351 aa8.55□□□□□ -1.04
CCDC171-205ENST00000472806 ADD3Q9UEY8 706 aaKnown RBP8.55□□□□□ -1.04
CCDC171-205ENST00000472806 COL2A1P02458 1487 aaPredicted RBP8.55□□□□□ -1.04
CCDC171-205ENST00000472806 FRMPD2Q68DX3 1309 aaPredicted RBP8.54□□□□□ -1.04
CCDC171-205ENST00000472806 KDM3AQ9Y4C1 1321 aa8.54□□□□□ -1.04
CCDC171-205ENST00000472806 PVALEFA0A1B0GWK0 134 aa8.54□□□□□ -1.04
CCDC171-205ENST00000472806 A0A1W2PQC6 194 aa8.54□□□□□ -1.04
CCDC171-205ENST00000472806 USP27XA6NNY8 438 aa8.54□□□□□ -1.04
CCDC171-205ENST00000472806 KCNJ18B7U540 433 aa8.54□□□□□ -1.04
CCDC171-205ENST00000472806 ECE2O60344 883 aa8.54□□□□□ -1.04
CCDC171-205ENST00000472806 VEGFAP15692 232 aaPredicted RBP8.54□□□□□ -1.04
CCDC171-205ENST00000472806 PLCG1P19174 1290 aa8.54□□□□□ -1.04
CCDC171-205ENST00000472806 LORP23490 312 aaPredicted RBP8.54□□□□□ -1.04
CCDC171-205ENST00000472806 RXRBP28702 533 aa8.54□□□□□ -1.04
CCDC171-205ENST00000472806 SCNN1DP51172 638 aa8.54□□□□□ -1.04
CCDC171-205ENST00000472806 RBM5P52756 815 aaKnown RBP eCLIP8.54□□□□□ -1.04
CCDC171-205ENST00000472806 COPB1P53618 953 aaKnown RBP8.54□□□□□ -1.04
CCDC171-205ENST00000472806 KCNH2Q12809 1159 aa8.54□□□□□ -1.04
CCDC171-205ENST00000472806 AP3B2Q13367 1082 aa8.54□□□□□ -1.04
CCDC171-205ENST00000472806 TUBB2AQ13885 445 aa8.54□□□□□ -1.04
CCDC171-205ENST00000472806 KCNJ12Q14500 433 aa8.54□□□□□ -1.04
CCDC171-205ENST00000472806 PTPRNQ16849 979 aa8.54□□□□□ -1.04
CCDC171-205ENST00000472806 CERKLQ49MI3 558 aaPredicted RBP8.54□□□□□ -1.04
CCDC171-205ENST00000472806 TCP11X2Q5H9J9 407 aa8.54□□□□□ -1.04
CCDC171-205ENST00000472806 JAKMIP3Q5VZ66 844 aa8.54□□□□□ -1.04
CCDC171-205ENST00000472806 TMEM179Q6ZVK1 233 aa8.54□□□□□ -1.04
CCDC171-205ENST00000472806 TMTC1Q8IUR5 882 aa8.54□□□□□ -1.04
CCDC171-205ENST00000472806 ZSCAN29Q8IWY8 852 aaPredicted RBP8.54□□□□□ -1.04
CCDC171-205ENST00000472806 ADGRF4Q8IZF3 695 aa8.54□□□□□ -1.04
CCDC171-205ENST00000472806 TC2NQ8N9U0 490 aa8.54□□□□□ -1.04
CCDC171-205ENST00000472806 ANKRD7Q92527 254 aa8.54□□□□□ -1.04
CCDC171-205ENST00000472806 KIFC2Q96AC6 838 aa8.54□□□□□ -1.04
CCDC171-205ENST00000472806 TUBB2BQ9BVA1 445 aa8.54□□□□□ -1.04
CCDC171-205ENST00000472806 NUP58Q9BVL2 599 aa8.54□□□□□ -1.04
CCDC171-205ENST00000472806 UBA5Q9GZZ9 404 aa8.54□□□□□ -1.04
CCDC171-205ENST00000472806 NT5C3AQ9H0P0 336 aa8.54□□□□□ -1.04
CCDC171-205ENST00000472806 DDX4Q9NQI0 724 aaKnown RBP8.54□□□□□ -1.04
CCDC171-205ENST00000472806 INTS13Q9NVM9 706 aa8.54□□□□□ -1.04
CCDC171-205ENST00000472806 STK32BQ9NY57 414 aa8.54□□□□□ -1.04
CCDC171-205ENST00000472806 BIN2Q9UBW5 565 aaPredicted RBP8.54□□□□□ -1.04
CCDC171-205ENST00000472806 LRWD1Q9UFC0 647 aa8.54□□□□□ -1.04
CCDC171-205ENST00000472806 PPP2R2CQ9Y2T4 447 aa8.54□□□□□ -1.04
CCDC171-205ENST00000472806 COL11A2P13942 1736 aaPredicted RBP8.54□□□□□ -1.04
CCDC171-205ENST00000472806 SOBPA7XYQ1 873 aa8.53□□□□□ -1.04
CCDC171-205ENST00000472806 MFAP3LO75121 409 aa8.53□□□□□ -1.04
CCDC171-205ENST00000472806 ZMYND10O75800 440 aa8.53□□□□□ -1.04
CCDC171-205ENST00000472806 KIF20AO95235 890 aa8.53□□□□□ -1.04
CCDC171-205ENST00000472806 FOSP01100 380 aaPredicted RBP8.53□□□□□ -1.04
CCDC171-205ENST00000472806 CCNE1P24864 410 aa8.53□□□□□ -1.04
CCDC171-205ENST00000472806 CASQ1P31415 396 aa8.53□□□□□ -1.04
CCDC171-205ENST00000472806 GMPRP36959 345 aa8.53□□□□□ -1.04
CCDC171-205ENST00000472806 PBX1P40424 430 aa8.53□□□□□ -1.04
CCDC171-205ENST00000472806 TECP42680 631 aa8.53□□□□□ -1.04
CCDC171-205ENST00000472806 PRCPP42785 496 aa8.53□□□□□ -1.04
CCDC171-205ENST00000472806 SLC1A4P43007 532 aa8.53□□□□□ -1.04
CCDC171-205ENST00000472806 DNM2P50570 870 aa8.53□□□□□ -1.04
CCDC171-205ENST00000472806 TUBB4BP68371 445 aa8.53□□□□□ -1.04
CCDC171-205ENST00000472806 ASIC1P78348 528 aa8.53□□□□□ -1.04
CCDC171-205ENST00000472806 ATP2B2Q01814 1243 aa8.53□□□□□ -1.04
CCDC171-205ENST00000472806 PDE4DQ08499 809 aa8.53□□□□□ -1.04
CCDC171-205ENST00000472806 PSMD2Q13200 908 aa8.53□□□□□ -1.04
CCDC171-205ENST00000472806 KRT31Q15323 416 aa8.53□□□□□ -1.04
CCDC171-205ENST00000472806 DACT2Q5SW24 774 aa8.53□□□□□ -1.04
CCDC171-205ENST00000472806 SLFN13Q68D06 897 aa8.53□□□□□ -1.04
CCDC171-205ENST00000472806 FOXR2Q6PJQ5 311 aa8.53□□□□□ -1.04
CCDC171-205ENST00000472806 MOXD1Q6UVY6 613 aa8.53□□□□□ -1.04
CCDC171-205ENST00000472806 SYT10Q6XYQ8 523 aa8.53□□□□□ -1.04
CCDC171-205ENST00000472806 SLC51AQ86UW1 340 aa8.53□□□□□ -1.04
CCDC171-205ENST00000472806 RETREG2Q8NC44 543 aa8.53□□□□□ -1.04
CCDC171-205ENST00000472806 GMCL1P1Q8NEA9 526 aa8.53□□□□□ -1.04
CCDC171-205ENST00000472806 STAMQ92783 540 aa8.53□□□□□ -1.04
CCDC171-205ENST00000472806 MTMR8Q96EF0 704 aa8.53□□□□□ -1.04
CCDC171-205ENST00000472806 ZFP42Q96MM3 310 aa8.53□□□□□ -1.04
CCDC171-205ENST00000472806 MTMR9Q96QG7 549 aa8.53□□□□□ -1.04
CCDC171-205ENST00000472806 BEGAINQ9BUH8 593 aa8.53□□□□□ -1.04
CCDC171-205ENST00000472806 VPS33BQ9H267 617 aa8.53□□□□□ -1.04
CCDC171-205ENST00000472806 PSTPIP2Q9H939 334 aa8.53□□□□□ -1.04
CCDC171-205ENST00000472806 L2HGDHQ9H9P8 463 aa8.53□□□□□ -1.04
CCDC171-205ENST00000472806 DBNDD1Q9H9R9 158 aa8.53□□□□□ -1.04
CCDC171-205ENST00000472806 JMJD4Q9H9V9 463 aa8.53□□□□□ -1.04
CCDC171-205ENST00000472806 HDAC9Q9UKV0 1011 aa8.53□□□□□ -1.04
CCDC171-205ENST00000472806 ABCB11O95342 1321 aa8.53□□□□□ -1.04
CCDC171-205ENST00000472806 GREB1LQ9C091 1923 aaPredicted RBP8.52□□□□□ -1.04
CCDC171-205ENST00000472806 ATRNL1Q5VV63 1379 aa8.52□□□□□ -1.05
CCDC171-205ENST00000472806 CFAP99D6REC4 459 aa8.52□□□□□ -1.05
CCDC171-205ENST00000472806 KLRC4O43908 158 aa8.52□□□□□ -1.05
CCDC171-205ENST00000472806 CASP1P29466 404 aa8.52□□□□□ -1.05
CCDC171-205ENST00000472806 TXKP42681 527 aa8.52□□□□□ -1.05
CCDC171-205ENST00000472806 TNNI2P48788 182 aa8.52□□□□□ -1.05
CCDC171-205ENST00000472806 CLK2P49760 499 aaKnown RBP8.52□□□□□ -1.05
CCDC171-205ENST00000472806 USP11P51784 963 aa8.52□□□□□ -1.05
CCDC171-205ENST00000472806 ADKP55263 362 aaKnown RBP8.52□□□□□ -1.05
CCDC171-205ENST00000472806 ICA1Q05084 483 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms