RNA–Protein interactions for RNA: ENST00000472610.5

COMMD3-210, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 428 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-210ENST00000472610 PPIGQ13427 754 aaKnown RBP eCLIP19.57■□□□□ 0.72
COMMD3-210ENST00000472610 NEDD9Q14511 834 aa19.57■□□□□ 0.72
COMMD3-210ENST00000472610 FAM47CQ5HY64 1035 aa19.57■□□□□ 0.72
COMMD3-210ENST00000472610 NLRX1Q86UT6 975 aa19.57■□□□□ 0.72
COMMD3-210ENST00000472610 ZFP91Q96JP5 570 aaPredicted RBP19.57■□□□□ 0.72
COMMD3-210ENST00000472610 SPATA33Q96N06 139 aa19.57■□□□□ 0.72
COMMD3-210ENST00000472610 KATNAL1Q9BW62 490 aa19.57■□□□□ 0.72
COMMD3-210ENST00000472610 PPP1R12CQ9BZL4 782 aa19.57■□□□□ 0.72
COMMD3-210ENST00000472610 HIPK3Q9H422 1215 aa19.57■□□□□ 0.72
COMMD3-210ENST00000472610 RIC8AQ9NPQ8 531 aa19.57■□□□□ 0.72
COMMD3-210ENST00000472610 BARHL2Q9NY43 387 aa19.57■□□□□ 0.72
COMMD3-210ENST00000472610 RANBP2P49792 3224 aaKnown RBP19.56■□□□□ 0.72
COMMD3-210ENST00000472610 FOSP01100 380 aaPredicted RBP19.56■□□□□ 0.72
COMMD3-210ENST00000472610 UBA1P22314 1058 aaKnown RBP19.56■□□□□ 0.72
COMMD3-210ENST00000472610 SP2Q02086 613 aa19.56■□□□□ 0.72
COMMD3-210ENST00000472610 LRCH3Q96II8 777 aa19.56■□□□□ 0.72
COMMD3-210ENST00000472610 RTEL1Q9NZ71 1219 aa19.56■□□□□ 0.72
COMMD3-210ENST00000472610 PCDHA6Q9UN73 950 aa19.56■□□□□ 0.72
COMMD3-210ENST00000472610 PCDHA8Q9Y5H6 950 aa19.56■□□□□ 0.72
COMMD3-210ENST00000472610 SMCO2A6NFE2 343 aa19.55■□□□□ 0.72
COMMD3-210ENST00000472610 STXBP3O00186 592 aa19.55■□□□□ 0.72
COMMD3-210ENST00000472610 PRPF3O43395 683 aaKnown RBP19.55■□□□□ 0.72
COMMD3-210ENST00000472610 HOXD8P13378 290 aaPredicted RBP19.55■□□□□ 0.72
COMMD3-210ENST00000472610 PDIA3P30101 505 aaKnown RBP19.55■□□□□ 0.72
COMMD3-210ENST00000472610 ADCY7P51828 1080 aa19.55■□□□□ 0.72
COMMD3-210ENST00000472610 AKAP17AQ02040 695 aaKnown RBP19.55■□□□□ 0.72
COMMD3-210ENST00000472610 UBE2SQ16763 222 aa19.55■□□□□ 0.72
COMMD3-210ENST00000472610 PFKFB3Q16875 520 aaPredicted RBP19.55■□□□□ 0.72
COMMD3-210ENST00000472610 C9orf50Q5SZB4 431 aa19.55■□□□□ 0.72
COMMD3-210ENST00000472610 SESTD1Q86VW0 696 aa19.55■□□□□ 0.72
COMMD3-210ENST00000472610 GIMAP8Q8ND71 665 aaPredicted RBP19.55■□□□□ 0.72
COMMD3-210ENST00000472610 CDHR1Q96JP9 859 aa19.55■□□□□ 0.72
COMMD3-210ENST00000472610 SENP7Q9BQF6 1050 aa19.55■□□□□ 0.72
COMMD3-210ENST00000472610 MAFGO15525 162 aa19.54■□□□□ 0.72
COMMD3-210ENST00000472610 SCG2P13521 617 aa19.54■□□□□ 0.72
COMMD3-210ENST00000472610 CYP2C18P33260 490 aa19.54■□□□□ 0.72
COMMD3-210ENST00000472610 TOB2Q14106 344 aaPredicted RBP19.54■□□□□ 0.72
COMMD3-210ENST00000472610 HSDL1Q3SXM5 330 aa19.54■□□□□ 0.72
COMMD3-210ENST00000472610 CCDC12Q8WUD4 166 aaPredicted RBP19.54■□□□□ 0.72
COMMD3-210ENST00000472610 KAT2BQ92831 832 aa19.54■□□□□ 0.72
COMMD3-210ENST00000472610 GPRASP2Q96D09 838 aa19.54■□□□□ 0.72
COMMD3-210ENST00000472610 ZNF274Q96GC6 653 aaPredicted RBP19.54■□□□□ 0.72
COMMD3-210ENST00000472610 NOC4LQ9BVI4 516 aaKnown RBP19.54■□□□□ 0.72
COMMD3-210ENST00000472610 TRMT13Q9NUP7 481 aaKnown RBP19.54■□□□□ 0.72
COMMD3-210ENST00000472610 F2P00734 622 aa19.53■□□□□ 0.72
COMMD3-210ENST00000472610 CSF2RAP15509 400 aa19.53■□□□□ 0.72
COMMD3-210ENST00000472610 PSEN2P49810 448 aa19.53■□□□□ 0.72
COMMD3-210ENST00000472610 EPHB4P54760 987 aa19.53■□□□□ 0.72
COMMD3-210ENST00000472610 CHMP4BP1P59074 171 aa19.53■□□□□ 0.72
COMMD3-210ENST00000472610 ANAPC15P60006 121 aa19.53■□□□□ 0.72
COMMD3-210ENST00000472610 MCTP2Q6DN12 878 aa19.53■□□□□ 0.72
COMMD3-210ENST00000472610 TYW1BQ6NUM6 668 aa19.53■□□□□ 0.72
COMMD3-210ENST00000472610 METTL7BQ6UX53 244 aa19.53■□□□□ 0.72
COMMD3-210ENST00000472610 RNF26Q9BY78 433 aaPredicted RBP19.53■□□□□ 0.72
COMMD3-210ENST00000472610 PDRG1Q9NUG6 133 aa19.53■□□□□ 0.72
COMMD3-210ENST00000472610 NOD1Q9Y239 953 aa19.53■□□□□ 0.72
COMMD3-210ENST00000472610 HAS3O00219 553 aa19.52■□□□□ 0.72
COMMD3-210ENST00000472610 NOP56O00567 594 aaKnown RBP19.52■□□□□ 0.72
COMMD3-210ENST00000472610 IFNAR1P17181 557 aa19.52■□□□□ 0.72
COMMD3-210ENST00000472610 SEMA3FQ13275 785 aa19.52■□□□□ 0.72
COMMD3-210ENST00000472610 AP3B2Q13367 1082 aa19.52■□□□□ 0.72
COMMD3-210ENST00000472610 NTRK3Q16288 839 aa19.52■□□□□ 0.72
COMMD3-210ENST00000472610 CYFIP1Q7L576 1253 aa19.52■□□□□ 0.72
COMMD3-210ENST00000472610 RPUSD2Q8IZ73 545 aaKnown RBP19.52■□□□□ 0.72
COMMD3-210ENST00000472610 C7orf31Q8N865 590 aa19.52■□□□□ 0.72
COMMD3-210ENST00000472610 RNPC3Q96LT9 517 aaKnown RBP19.52■□□□□ 0.72
COMMD3-210ENST00000472610 UPF3BQ9BZI7 483 aaKnown RBP19.52■□□□□ 0.72
COMMD3-210ENST00000472610 IL23AQ9NPF7 189 aa19.52■□□□□ 0.72
COMMD3-210ENST00000472610 UBIAD1Q9Y5Z9 338 aa19.52■□□□□ 0.72
COMMD3-210ENST00000472610 ESYT2A0FGR8 921 aa19.51■□□□□ 0.71
COMMD3-210ENST00000472610 SORBS3O60504 671 aa19.51■□□□□ 0.71
COMMD3-210ENST00000472610 CYP2C9P11712 490 aa19.51■□□□□ 0.71
COMMD3-210ENST00000472610 CCT2P78371 535 aaKnown RBP19.51■□□□□ 0.71
COMMD3-210ENST00000472610 MFSD10Q14728 455 aa19.51■□□□□ 0.71
COMMD3-210ENST00000472610 PTGISQ16647 500 aa19.51■□□□□ 0.71
COMMD3-210ENST00000472610 KIAA0753Q2KHM9 967 aa19.51■□□□□ 0.71
COMMD3-210ENST00000472610 PSRC1Q6PGN9 363 aaPredicted RBP19.51■□□□□ 0.71
COMMD3-210ENST00000472610 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.51■□□□□ 0.71
COMMD3-210ENST00000472610 ALG1Q9BT22 464 aa19.51■□□□□ 0.71
COMMD3-210ENST00000472610 C6orf50Q9HD87 102 aa19.51■□□□□ 0.71
COMMD3-210ENST00000472610 JADE2Q9NQC1 790 aa19.51■□□□□ 0.71
COMMD3-210ENST00000472610 DOCK5Q9H7D0 1870 aa19.5■□□□□ 0.71
COMMD3-210ENST00000472610 ZNF286BP0CG31 522 aa19.5■□□□□ 0.71
COMMD3-210ENST00000472610 ITGB5P18084 799 aa19.5■□□□□ 0.71
COMMD3-210ENST00000472610 GNA11P29992 359 aa19.5■□□□□ 0.71
COMMD3-210ENST00000472610 CLK2P49760 499 aaKnown RBP19.5■□□□□ 0.71
COMMD3-210ENST00000472610 CCL23P55773 120 aa19.5■□□□□ 0.71
COMMD3-210ENST00000472610 BFSP2Q13515 415 aa19.5■□□□□ 0.71
COMMD3-210ENST00000472610 MTMR1Q13613 665 aa19.5■□□□□ 0.71
COMMD3-210ENST00000472610 PKN1Q16512 942 aa19.5■□□□□ 0.71
COMMD3-210ENST00000472610 TMEM240Q5SV17 173 aa19.5■□□□□ 0.71
COMMD3-210ENST00000472610 C16orf59Q7L2K0 433 aa19.5■□□□□ 0.71
COMMD3-210ENST00000472610 CCDC155Q8N6L0 562 aa19.5■□□□□ 0.71
COMMD3-210ENST00000472610 RETREG2Q8NC44 543 aa19.5■□□□□ 0.71
COMMD3-210ENST00000472610 PHKBQ93100 1093 aa19.5■□□□□ 0.71
COMMD3-210ENST00000472610 C16orf70Q9BSU1 422 aa19.5■□□□□ 0.71
COMMD3-210ENST00000472610 ANO3Q9BYT9 981 aa19.5■□□□□ 0.71
COMMD3-210ENST00000472610 ZMYND12Q9H0C1 365 aa19.5■□□□□ 0.71
COMMD3-210ENST00000472610 HDAC6Q9UBN7 1215 aa19.5■□□□□ 0.71
COMMD3-210ENST00000472610 GTF2IRD1Q9UHL9 959 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms