RNA–Protein interactions for RNA: ENST00000472103.5

SMARCD3-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 5

Gene SMARCD3, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-207ENST00000472103 ZNF76P36508 570 aa16.66■□□□□ 0.26
SMARCD3-207ENST00000472103 PLA2G4DQ86XP0 818 aa16.66■□□□□ 0.26
SMARCD3-207ENST00000472103 GJA10Q969M2 543 aa16.66■□□□□ 0.26
SMARCD3-207ENST00000472103 IPO9Q96P70 1041 aaKnown RBP16.66■□□□□ 0.26
SMARCD3-207ENST00000472103 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.66■□□□□ 0.26
SMARCD3-207ENST00000472103 PKD2L1Q9P0L9 805 aa16.66■□□□□ 0.26
SMARCD3-207ENST00000472103 DDX41Q9UJV9 622 aaKnown RBP16.66■□□□□ 0.26
SMARCD3-207ENST00000472103 TELO2Q9Y4R8 837 aa16.66■□□□□ 0.26
SMARCD3-207ENST00000472103 CYP3A7-CYP3A51PA0A087WV96 503 aa16.65■□□□□ 0.26
SMARCD3-207ENST00000472103 SPATA31C2B4DYI2 1134 aa16.65■□□□□ 0.26
SMARCD3-207ENST00000472103 SEPT4O43236 478 aa16.65■□□□□ 0.26
SMARCD3-207ENST00000472103 CCNT1O60563 726 aaKnown RBP16.65■□□□□ 0.26
SMARCD3-207ENST00000472103 STAM2O75886 525 aa16.65■□□□□ 0.26
SMARCD3-207ENST00000472103 F13A1P00488 732 aa16.65■□□□□ 0.26
SMARCD3-207ENST00000472103 CCL5P13501 91 aa16.65■□□□□ 0.26
SMARCD3-207ENST00000472103 CYP3A7P24462 503 aa16.65■□□□□ 0.26
SMARCD3-207ENST00000472103 ZNF174Q15697 407 aa16.65■□□□□ 0.26
SMARCD3-207ENST00000472103 PRR16Q569H4 304 aa16.65■□□□□ 0.26
SMARCD3-207ENST00000472103 MYSM1Q5VVJ2 828 aa16.65■□□□□ 0.26
SMARCD3-207ENST00000472103 GPRASP2Q96D09 838 aa16.65■□□□□ 0.26
SMARCD3-207ENST00000472103 HMX1Q9NP08 348 aaPredicted RBP16.65■□□□□ 0.26
SMARCD3-207ENST00000472103 FAM184BQ9ULE4 1060 aa16.65■□□□□ 0.26
SMARCD3-207ENST00000472103 GNEQ9Y223 722 aaKnown RBP16.65■□□□□ 0.26
SMARCD3-207ENST00000472103 PCDHB6Q9Y5E3 794 aa16.65■□□□□ 0.26
SMARCD3-207ENST00000472103 MRVI1Q9Y6F6 885 aa16.65■□□□□ 0.26
SMARCD3-207ENST00000472103 MSH4O15457 936 aa16.64■□□□□ 0.25
SMARCD3-207ENST00000472103 FIBPO43427 364 aa16.64■□□□□ 0.25
SMARCD3-207ENST00000472103 TXNP10599 105 aaKnown RBP16.64■□□□□ 0.25
SMARCD3-207ENST00000472103 AKR1A1P14550 325 aa16.64■□□□□ 0.25
SMARCD3-207ENST00000472103 KCNA2P16389 499 aa16.64■□□□□ 0.25
SMARCD3-207ENST00000472103 UBA1P22314 1058 aaKnown RBP16.64■□□□□ 0.25
SMARCD3-207ENST00000472103 TNFAIP2Q03169 654 aa16.64■□□□□ 0.25
SMARCD3-207ENST00000472103 MTMR1Q13613 665 aa16.64■□□□□ 0.25
SMARCD3-207ENST00000472103 Q4G0T1 1027 aa16.64■□□□□ 0.25
SMARCD3-207ENST00000472103 TTC38Q5R3I4 469 aa16.64■□□□□ 0.25
SMARCD3-207ENST00000472103 IQSEC1Q6DN90 963 aa16.64■□□□□ 0.25
SMARCD3-207ENST00000472103 PPP4R3AQ6IN85 833 aa16.64■□□□□ 0.25
SMARCD3-207ENST00000472103 MOXD1Q6UVY6 613 aa16.64■□□□□ 0.25
SMARCD3-207ENST00000472103 NIPA1Q7RTP0 329 aa16.64■□□□□ 0.25
SMARCD3-207ENST00000472103 NLRX1Q86UT6 975 aa16.64■□□□□ 0.25
SMARCD3-207ENST00000472103 POTEDQ86YR6 584 aa16.64■□□□□ 0.25
SMARCD3-207ENST00000472103 SCFD2Q8WU76 684 aa16.64■□□□□ 0.25
SMARCD3-207ENST00000472103 CHAMP1Q96JM3 812 aa16.64■□□□□ 0.25
SMARCD3-207ENST00000472103 FTOQ9C0B1 505 aaKnown RBP eCLIP16.64■□□□□ 0.25
SMARCD3-207ENST00000472103 TMEM60Q9H2L4 133 aa16.64■□□□□ 0.25
SMARCD3-207ENST00000472103 AGO4Q9HCK5 861 aaKnown RBP16.64■□□□□ 0.25
SMARCD3-207ENST00000472103 KCNH7Q9NS40 1196 aa16.64■□□□□ 0.25
SMARCD3-207ENST00000472103 DDX20Q9UHI6 824 aaKnown RBP16.64■□□□□ 0.25
SMARCD3-207ENST00000472103 MCM7P33993 719 aa16.63■□□□□ 0.25
SMARCD3-207ENST00000472103 ITGB3BPQ13352 177 aaPredicted RBP16.63■□□□□ 0.25
SMARCD3-207ENST00000472103 TTLL4Q14679 1199 aa16.63■□□□□ 0.25
SMARCD3-207ENST00000472103 FOXD4L6Q3SYB3 417 aaPredicted RBP16.63■□□□□ 0.25
SMARCD3-207ENST00000472103 GNPTABQ3T906 1256 aa16.63■□□□□ 0.25
SMARCD3-207ENST00000472103 DUSP28Q4G0W2 176 aa16.63■□□□□ 0.25
SMARCD3-207ENST00000472103 LHX8Q68G74 356 aa16.63■□□□□ 0.25
SMARCD3-207ENST00000472103 FOXD4L3Q6VB84 417 aaPredicted RBP16.63■□□□□ 0.25
SMARCD3-207ENST00000472103 BRAPQ7Z569 592 aa16.63■□□□□ 0.25
SMARCD3-207ENST00000472103 RNF208Q9H0X6 261 aa16.63■□□□□ 0.25
SMARCD3-207ENST00000472103 PAK6Q9NQU5 681 aaPredicted RBP16.63■□□□□ 0.25
SMARCD3-207ENST00000472103 DAXXQ9UER7 740 aaPredicted RBP16.63■□□□□ 0.25
SMARCD3-207ENST00000472103 DDX25Q9UHL0 483 aaKnown RBP16.63■□□□□ 0.25
SMARCD3-207ENST00000472103 NOL7Q9UMY1 257 aaKnown RBP16.63■□□□□ 0.25
SMARCD3-207ENST00000472103 MYADML2A6NDP7 307 aa16.62■□□□□ 0.25
SMARCD3-207ENST00000472103 TRAPPC10P48553 1259 aa16.62■□□□□ 0.25
SMARCD3-207ENST00000472103 ARHGAP1Q07960 439 aa16.62■□□□□ 0.25
SMARCD3-207ENST00000472103 C4orf32Q8N8J7 132 aa16.62■□□□□ 0.25
SMARCD3-207ENST00000472103 ETNPPLQ8TBG4 499 aa16.62■□□□□ 0.25
SMARCD3-207ENST00000472103 HAS1Q92839 578 aa16.62■□□□□ 0.25
SMARCD3-207ENST00000472103 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.62■□□□□ 0.25
SMARCD3-207ENST00000472103 CTAGE5O15320 804 aa16.61■□□□□ 0.25
SMARCD3-207ENST00000472103 DHX15O43143 795 aaKnown RBP16.61■□□□□ 0.25
SMARCD3-207ENST00000472103 DYNC1LI2O43237 492 aaPredicted RBP16.61■□□□□ 0.25
SMARCD3-207ENST00000472103 GGPS1O95749 300 aa16.61■□□□□ 0.25
SMARCD3-207ENST00000472103 PGK1P00558 417 aa16.61■□□□□ 0.25
SMARCD3-207ENST00000472103 GCFC2P16383 781 aaKnown RBP16.61■□□□□ 0.25
SMARCD3-207ENST00000472103 SETQ01105 290 aaPredicted RBP16.61■□□□□ 0.25
SMARCD3-207ENST00000472103 DEFB118Q96PH6 123 aa16.61■□□□□ 0.25
SMARCD3-207ENST00000472103 USP28Q96RU2 1077 aa16.61■□□□□ 0.25
SMARCD3-207ENST00000472103 ZNF577Q9BSK1 485 aa16.61■□□□□ 0.25
SMARCD3-207ENST00000472103 ZSCAN16Q9H4T2 348 aaPredicted RBP16.61■□□□□ 0.25
SMARCD3-207ENST00000472103 KCNMB3Q9NPA1 279 aa16.61■□□□□ 0.25
SMARCD3-207ENST00000472103 CLIC4Q9Y696 253 aa16.61■□□□□ 0.25
SMARCD3-207ENST00000472103 DDX39AO00148 427 aaKnown RBP16.6■□□□□ 0.25
SMARCD3-207ENST00000472103 MAFGO15525 162 aa16.6■□□□□ 0.25
SMARCD3-207ENST00000472103 ADAMTS4O75173 837 aa16.6■□□□□ 0.25
SMARCD3-207ENST00000472103 DUSP11O75319 330 aaKnown RBP16.6■□□□□ 0.25
SMARCD3-207ENST00000472103 FARP2O94887 1054 aaPredicted RBP16.6■□□□□ 0.25
SMARCD3-207ENST00000472103 TGFB3P10600 412 aa16.6■□□□□ 0.25
SMARCD3-207ENST00000472103 RILPL1Q5EBL4 403 aa16.6■□□□□ 0.25
SMARCD3-207ENST00000472103 CELF3Q5SZQ8 465 aaKnown RBP16.6■□□□□ 0.25
SMARCD3-207ENST00000472103 KCNV1Q6PIU1 500 aa16.6■□□□□ 0.25
SMARCD3-207ENST00000472103 CYFIP1Q7L576 1253 aa16.6■□□□□ 0.25
SMARCD3-207ENST00000472103 TLK2Q86UE8 772 aa16.6■□□□□ 0.25
SMARCD3-207ENST00000472103 SLC5A5Q92911 643 aa16.6■□□□□ 0.25
SMARCD3-207ENST00000472103 MTMR9Q96QG7 549 aa16.6■□□□□ 0.25
SMARCD3-207ENST00000472103 SYNRGQ9UMZ2 1314 aa16.6■□□□□ 0.25
SMARCD3-207ENST00000472103 IPO5O00410 1097 aaKnown RBP16.59■□□□□ 0.25
SMARCD3-207ENST00000472103 NEMFO60524 1076 aa16.59■□□□□ 0.25
SMARCD3-207ENST00000472103 GH1P01241 217 aa16.59■□□□□ 0.25
SMARCD3-207ENST00000472103 RARBP10826 455 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms