RNA–Protein interactions for RNA: ENST00000471880.5

SSR4-208, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 5

Gene SSR4, Length 785 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-208ENST00000471880 HIPK3Q9H422 1215 aa16.98■□□□□ 0.31
SSR4-208ENST00000471880 PCDHA6Q9UN73 950 aa16.98■□□□□ 0.31
SSR4-208ENST00000471880 PCDHA8Q9Y5H6 950 aa16.98■□□□□ 0.31
SSR4-208ENST00000471880 STXBP3O00186 592 aa16.97■□□□□ 0.31
SSR4-208ENST00000471880 FIBPO43427 364 aa16.97■□□□□ 0.31
SSR4-208ENST00000471880 STAM2O75886 525 aa16.97■□□□□ 0.31
SSR4-208ENST00000471880 TIMP1P01033 207 aa16.97■□□□□ 0.31
SSR4-208ENST00000471880 SCG2P13521 617 aa16.97■□□□□ 0.31
SSR4-208ENST00000471880 PDIA3P30101 505 aaKnown RBP16.97■□□□□ 0.31
SSR4-208ENST00000471880 CYP2C18P33260 490 aa16.97■□□□□ 0.31
SSR4-208ENST00000471880 FUT2Q10981 343 aa16.97■□□□□ 0.31
SSR4-208ENST00000471880 C9orf50Q5SZB4 431 aa16.97■□□□□ 0.31
SSR4-208ENST00000471880 CELF3Q5SZQ8 465 aaKnown RBP16.97■□□□□ 0.31
SSR4-208ENST00000471880 PCNX4Q63HM2 1172 aa16.97■□□□□ 0.31
SSR4-208ENST00000471880 PPP1R18Q6NYC8 613 aa16.97■□□□□ 0.31
SSR4-208ENST00000471880 ALDH8A1Q9H2A2 487 aaPredicted RBP16.97■□□□□ 0.31
SSR4-208ENST00000471880 TRMT13Q9NUP7 481 aaKnown RBP16.97■□□□□ 0.31
SSR4-208ENST00000471880 BARHL2Q9NY43 387 aa16.97■□□□□ 0.31
SSR4-208ENST00000471880 TBX21Q9UL17 535 aa16.97■□□□□ 0.31
SSR4-208ENST00000471880 GBF1Q92538 1859 aa16.97■□□□□ 0.31
SSR4-208ENST00000471880 hCG_1984214I3L0E3 225 aa16.96■□□□□ 0.31
SSR4-208ENST00000471880 EIF5BO60841 1220 aaKnown RBP16.96■□□□□ 0.31
SSR4-208ENST00000471880 TGFB3P10600 412 aa16.96■□□□□ 0.31
SSR4-208ENST00000471880 CYP2C9P11712 490 aa16.96■□□□□ 0.31
SSR4-208ENST00000471880 CCL23P55773 120 aa16.96■□□□□ 0.31
SSR4-208ENST00000471880 TOB2Q14106 344 aaPredicted RBP16.96■□□□□ 0.31
SSR4-208ENST00000471880 SHHQ15465 462 aa16.96■□□□□ 0.31
SSR4-208ENST00000471880 MYSM1Q5VVJ2 828 aa16.96■□□□□ 0.31
SSR4-208ENST00000471880 TYW1BQ6NUM6 668 aa16.96■□□□□ 0.31
SSR4-208ENST00000471880 CYFIP1Q7L576 1253 aa16.96■□□□□ 0.31
SSR4-208ENST00000471880 TMEM199Q8N511 208 aa16.96■□□□□ 0.31
SSR4-208ENST00000471880 ZNF713Q8N859 430 aaPredicted RBP16.96■□□□□ 0.31
SSR4-208ENST00000471880 SLC43A3Q8NBI5 491 aa16.96■□□□□ 0.31
SSR4-208ENST00000471880 PPTC7Q8NI37 304 aa16.96■□□□□ 0.31
SSR4-208ENST00000471880 SEZ6LQ9BYH1 1024 aa16.96■□□□□ 0.31
SSR4-208ENST00000471880 TM6SF1Q9BZW5 370 aa16.96■□□□□ 0.31
SSR4-208ENST00000471880 RIC8AQ9NPQ8 531 aa16.96■□□□□ 0.31
SSR4-208ENST00000471880 TMEM260Q9NX78 707 aa16.96■□□□□ 0.31
SSR4-208ENST00000471880 FRMPD4Q14CM0 1322 aa16.96■□□□□ 0.3
SSR4-208ENST00000471880 RBAK-RBAKDNI3L0D1 243 aa16.95■□□□□ 0.3
SSR4-208ENST00000471880 CD4P01730 458 aa16.95■□□□□ 0.3
SSR4-208ENST00000471880 SUPT20HL2P0C7V6 817 aa16.95■□□□□ 0.3
SSR4-208ENST00000471880 ZNF76P36508 570 aa16.95■□□□□ 0.3
SSR4-208ENST00000471880 SP2Q02086 613 aa16.95■□□□□ 0.3
SSR4-208ENST00000471880 NEDD9Q14511 834 aa16.95■□□□□ 0.3
SSR4-208ENST00000471880 PFKFB3Q16875 520 aaPredicted RBP16.95■□□□□ 0.3
SSR4-208ENST00000471880 HSDL1Q3SXM5 330 aa16.95■□□□□ 0.3
SSR4-208ENST00000471880 JAKMIP3Q5VZ66 844 aa16.95■□□□□ 0.3
SSR4-208ENST00000471880 MFSD5Q6N075 450 aa16.95■□□□□ 0.3
SSR4-208ENST00000471880 XRRA1Q6P2D8 792 aa16.95■□□□□ 0.3
SSR4-208ENST00000471880 CPLX2Q6PUV4 134 aaKnown RBP16.95■□□□□ 0.3
SSR4-208ENST00000471880 TRIM22Q8IYM9 498 aa16.95■□□□□ 0.3
SSR4-208ENST00000471880 C7orf31Q8N865 590 aa16.95■□□□□ 0.3
SSR4-208ENST00000471880 TET1Q8NFU7 2136 aa16.95■□□□□ 0.3
SSR4-208ENST00000471880 CCDC12Q8WUD4 166 aaPredicted RBP16.95■□□□□ 0.3
SSR4-208ENST00000471880 RNPC3Q96LT9 517 aaKnown RBP16.95■□□□□ 0.3
SSR4-208ENST00000471880 INPP4AQ96PE3 977 aaPredicted RBP16.95■□□□□ 0.3
SSR4-208ENST00000471880 KATNAL1Q9BW62 490 aa16.95■□□□□ 0.3
SSR4-208ENST00000471880 AGXT2Q9BYV1 514 aa16.95■□□□□ 0.3
SSR4-208ENST00000471880 SPATA31C2B4DYI2 1134 aa16.94■□□□□ 0.3
SSR4-208ENST00000471880 PRPF3O43395 683 aaKnown RBP16.94■□□□□ 0.3
SSR4-208ENST00000471880 ACRP10323 421 aa16.94■□□□□ 0.3
SSR4-208ENST00000471880 CSF2RAP15509 400 aa16.94■□□□□ 0.3
SSR4-208ENST00000471880 PSEN2P49810 448 aa16.94■□□□□ 0.3
SSR4-208ENST00000471880 SSRP1Q08945 709 aaKnown RBP16.94■□□□□ 0.3
SSR4-208ENST00000471880 PPIGQ13427 754 aaKnown RBP eCLIP16.94■□□□□ 0.37e-9■□□□□ 8.7
SSR4-208ENST00000471880 MTMR1Q13613 665 aa16.94■□□□□ 0.3
SSR4-208ENST00000471880 MFSD10Q14728 455 aa16.94■□□□□ 0.3
SSR4-208ENST00000471880 KIAA0753Q2KHM9 967 aa16.94■□□□□ 0.3
SSR4-208ENST00000471880 UTP14CQ5TAP6 766 aaKnown RBP16.94■□□□□ 0.3
SSR4-208ENST00000471880 NFRKBQ6P4R8 1299 aa16.94■□□□□ 0.3
SSR4-208ENST00000471880 EMID1Q96A84 441 aaPredicted RBP16.94■□□□□ 0.3
SSR4-208ENST00000471880 ANO3Q9BYT9 981 aa16.94■□□□□ 0.3
SSR4-208ENST00000471880 BCAS3Q9H6U6 928 aa16.94■□□□□ 0.3
SSR4-208ENST00000471880 C6orf50Q9HD87 102 aa16.94■□□□□ 0.3
SSR4-208ENST00000471880 UMODL1Q5DID0 1318 aa16.94■□□□□ 0.3
SSR4-208ENST00000471880 MYO9BQ13459 2157 aa16.94■□□□□ 0.3
SSR4-208ENST00000471880 TANC1Q9C0D5 1861 aa16.93■□□□□ 0.3
SSR4-208ENST00000471880 FOSP01100 380 aaPredicted RBP16.93■□□□□ 0.3
SSR4-208ENST00000471880 PTGISQ16647 500 aa16.93■□□□□ 0.3
SSR4-208ENST00000471880 LRIT3Q3SXY7 679 aa16.93■□□□□ 0.3
SSR4-208ENST00000471880 FBXL16Q8N461 479 aa16.93■□□□□ 0.3
SSR4-208ENST00000471880 CDHR1Q96JP9 859 aa16.93■□□□□ 0.3
SSR4-208ENST00000471880 GLT8D2Q9H1C3 349 aa16.93■□□□□ 0.3
SSR4-208ENST00000471880 IFNAR1P17181 557 aa16.92■□□□□ 0.3
SSR4-208ENST00000471880 ICAM3P32942 547 aa16.92■□□□□ 0.3
SSR4-208ENST00000471880 NLRP5P59047 1200 aa16.92■□□□□ 0.3
SSR4-208ENST00000471880 SEMA3FQ13275 785 aa16.92■□□□□ 0.3
SSR4-208ENST00000471880 RETREG2Q8NC44 543 aa16.92■□□□□ 0.3
SSR4-208ENST00000471880 CCDC148Q8NFR7 591 aa16.92■□□□□ 0.3
SSR4-208ENST00000471880 GPRASP2Q96D09 838 aa16.92■□□□□ 0.3
SSR4-208ENST00000471880 ZNF274Q96GC6 653 aaPredicted RBP16.92■□□□□ 0.3
SSR4-208ENST00000471880 SCLYQ96I15 445 aa16.92■□□□□ 0.3
SSR4-208ENST00000471880 NOC4LQ9BVI4 516 aaKnown RBP16.92■□□□□ 0.3
SSR4-208ENST00000471880 RNF26Q9BY78 433 aaPredicted RBP16.92■□□□□ 0.3
SSR4-208ENST00000471880 SLKQ9H2G2 1235 aaPredicted RBP16.92■□□□□ 0.3
SSR4-208ENST00000471880 VPS54Q9P1Q0 977 aa16.92■□□□□ 0.3
SSR4-208ENST00000471880 NID2Q14112 1375 aa16.91■□□□□ 0.3
SSR4-208ENST00000471880 PPFIA4O75335 1185 aa16.91■□□□□ 0.3
SSR4-208ENST00000471880 SEC24BO95487 1268 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms