RNA–Protein interactions for RNA: ENST00000471862.1

COL4A3-205, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 5

Gene COL4A3, Length 755 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-205ENST00000471862 GDF6Q6KF10 455 aaPredicted RBP13.29□□□□□ -0.28
COL4A3-205ENST00000471862 MICU3Q86XE3 530 aa13.29□□□□□ -0.28
COL4A3-205ENST00000471862 TCEANC2Q96MN5 208 aa13.29□□□□□ -0.28
COL4A3-205ENST00000471862 CDX2Q99626 313 aaPredicted RBP13.29□□□□□ -0.28
COL4A3-205ENST00000471862 BRPF3Q9ULD4 1205 aa13.29□□□□□ -0.28
COL4A3-205ENST00000471862 CNTNAP5Q8WYK1 1306 aa13.29□□□□□ -0.28
COL4A3-205ENST00000471862 hCG_1642624A0A1W2PR95 340 aa13.28□□□□□ -0.28
COL4A3-205ENST00000471862 GRXCR1A8MXD5 290 aa13.28□□□□□ -0.28
COL4A3-205ENST00000471862 PPFIA4O75335 1185 aa13.28□□□□□ -0.28
COL4A3-205ENST00000471862 PFKMP08237 780 aa13.28□□□□□ -0.28
COL4A3-205ENST00000471862 ZNF286BP0CG31 522 aa13.28□□□□□ -0.28
COL4A3-205ENST00000471862 RBL2Q08999 1139 aa13.28□□□□□ -0.28
COL4A3-205ENST00000471862 KRT32Q14532 448 aa13.28□□□□□ -0.28
COL4A3-205ENST00000471862 RPUSD2Q8IZ73 545 aaKnown RBP13.28□□□□□ -0.28
COL4A3-205ENST00000471862 SMARCC2Q8TAQ2 1214 aa13.28□□□□□ -0.28
COL4A3-205ENST00000471862 DHX38Q92620 1227 aaKnown RBP13.28□□□□□ -0.28
COL4A3-205ENST00000471862 SPATA33Q96N06 139 aa13.28□□□□□ -0.28
COL4A3-205ENST00000471862 KATNAL1Q9BW62 490 aa13.28□□□□□ -0.28
COL4A3-205ENST00000471862 PBX4Q9BYU1 374 aa13.28□□□□□ -0.28
COL4A3-205ENST00000471862 BCAS3Q9H6U6 928 aa13.28□□□□□ -0.28
COL4A3-205ENST00000471862 HDAC6Q9UBN7 1215 aa13.28□□□□□ -0.28
COL4A3-205ENST00000471862 GTF2IRD1Q9UHL9 959 aa13.28□□□□□ -0.28
COL4A3-205ENST00000471862 MYO9BQ13459 2157 aa13.27□□□□□ -0.28
COL4A3-205ENST00000471862 SPATA31C2B4DYI2 1134 aa13.27□□□□□ -0.29
COL4A3-205ENST00000471862 FIBPO43427 364 aa13.27□□□□□ -0.29
COL4A3-205ENST00000471862 IQCF3P0C7M6 154 aa13.27□□□□□ -0.29
COL4A3-205ENST00000471862 HSPA4P34932 840 aa13.27□□□□□ -0.29
COL4A3-205ENST00000471862 RFC2P35250 354 aa13.27□□□□□ -0.29
COL4A3-205ENST00000471862 PBX2P40425 430 aa13.27□□□□□ -0.29
COL4A3-205ENST00000471862 MFSD10Q14728 455 aa13.27□□□□□ -0.29
COL4A3-205ENST00000471862 PTGISQ16647 500 aa13.27□□□□□ -0.29
COL4A3-205ENST00000471862 KIAA0753Q2KHM9 967 aa13.27□□□□□ -0.29
COL4A3-205ENST00000471862 GNPTABQ3T906 1256 aa13.27□□□□□ -0.29
COL4A3-205ENST00000471862 PCNX4Q63HM2 1172 aa13.27□□□□□ -0.29
COL4A3-205ENST00000471862 XRRA1Q6P2D8 792 aa13.27□□□□□ -0.29
COL4A3-205ENST00000471862 OTOP2Q7RTS6 562 aa13.27□□□□□ -0.29
COL4A3-205ENST00000471862 CCDC82Q8N4S0 544 aa13.27□□□□□ -0.29
COL4A3-205ENST00000471862 CAGE1Q8TC20 777 aa13.27□□□□□ -0.29
COL4A3-205ENST00000471862 CUL5Q93034 780 aa13.27□□□□□ -0.29
COL4A3-205ENST00000471862 TIFAQ96CG3 184 aa13.27□□□□□ -0.29
COL4A3-205ENST00000471862 C16orf70Q9BSU1 422 aa13.27□□□□□ -0.29
COL4A3-205ENST00000471862 MTIF3Q9H2K0 278 aaKnown RBP13.27□□□□□ -0.29
COL4A3-205ENST00000471862 FAM217BQ9NTX9 383 aaPredicted RBP13.27□□□□□ -0.29
COL4A3-205ENST00000471862 RBM28Q9NW13 759 aaKnown RBP13.27□□□□□ -0.29
COL4A3-205ENST00000471862 EYSQ5T1H1 3165 aa13.26□□□□□ -0.29
COL4A3-205ENST00000471862 ZBTB43O43298 467 aa13.26□□□□□ -0.29
COL4A3-205ENST00000471862 SORBS3O60504 671 aa13.26□□□□□ -0.29
COL4A3-205ENST00000471862 HMGB1P09429 215 aaKnown RBP13.26□□□□□ -0.29
COL4A3-205ENST00000471862 RCAN1P53805 252 aa13.26□□□□□ -0.29
COL4A3-205ENST00000471862 CHMP4BP1P59074 171 aa13.26□□□□□ -0.29
COL4A3-205ENST00000471862 PTPRSQ13332 1948 aa13.26□□□□□ -0.29
COL4A3-205ENST00000471862 BFSP2Q13515 415 aa13.26□□□□□ -0.29
COL4A3-205ENST00000471862 HIC1Q14526 733 aa13.26□□□□□ -0.29
COL4A3-205ENST00000471862 GPNMBQ14956 572 aa13.26□□□□□ -0.29
COL4A3-205ENST00000471862 RTN1Q16799 776 aa13.26□□□□□ -0.29
COL4A3-205ENST00000471862 TYW1BQ6NUM6 668 aa13.26□□□□□ -0.29
COL4A3-205ENST00000471862 SYNE3Q6ZMZ3 975 aa13.26□□□□□ -0.29
COL4A3-205ENST00000471862 MYLIPQ8WY64 445 aa13.26□□□□□ -0.29
COL4A3-205ENST00000471862 ALG1Q9BT22 464 aa13.26□□□□□ -0.29
COL4A3-205ENST00000471862 PSTPIP2Q9H939 334 aa13.26□□□□□ -0.29
COL4A3-205ENST00000471862 MLXIPQ9HAP2 919 aa13.26□□□□□ -0.29
COL4A3-205ENST00000471862 RTEL1Q9NZ71 1219 aa13.26□□□□□ -0.29
COL4A3-205ENST00000471862 NOD1Q9Y239 953 aa13.26□□□□□ -0.29
COL4A3-205ENST00000471862 SNX14Q9Y5W7 946 aa13.26□□□□□ -0.29
COL4A3-205ENST00000471862 CHD9Q3L8U1 2897 aa13.26□□□□□ -0.29
COL4A3-205ENST00000471862 NID2Q14112 1375 aa13.25□□□□□ -0.29
COL4A3-205ENST00000471862 CPA1P15085 419 aa13.25□□□□□ -0.29
COL4A3-205ENST00000471862 CDC27P30260 824 aa13.25□□□□□ -0.29
COL4A3-205ENST00000471862 HOXC8P31273 242 aa13.25□□□□□ -0.29
COL4A3-205ENST00000471862 NEDD9Q14511 834 aa13.25□□□□□ -0.29
COL4A3-205ENST00000471862 GRIN2CQ14957 1233 aa13.25□□□□□ -0.29
COL4A3-205ENST00000471862 UBE2SQ16763 222 aa13.25□□□□□ -0.29
COL4A3-205ENST00000471862 TRIM71Q2Q1W2 868 aaKnown RBP13.25□□□□□ -0.29
COL4A3-205ENST00000471862 WWC2Q6AWC2 1192 aa13.25□□□□□ -0.29
COL4A3-205ENST00000471862 METTL7BQ6UX53 244 aa13.25□□□□□ -0.29
COL4A3-205ENST00000471862 DEFB128Q7Z7B8 93 aa13.25□□□□□ -0.29
COL4A3-205ENST00000471862 CCDC155Q8N6L0 562 aa13.25□□□□□ -0.29
COL4A3-205ENST00000471862 C7orf31Q8N865 590 aa13.25□□□□□ -0.29
COL4A3-205ENST00000471862 RETREG2Q8NC44 543 aa13.25□□□□□ -0.29
COL4A3-205ENST00000471862 SLC17A8Q8NDX2 589 aa13.25□□□□□ -0.29
COL4A3-205ENST00000471862 AFAP1L1Q8TED9 768 aa13.25□□□□□ -0.29
COL4A3-205ENST00000471862 GPR20Q99678 358 aa13.25□□□□□ -0.29
COL4A3-205ENST00000471862 SENP7Q9BQF6 1050 aa13.25□□□□□ -0.29
COL4A3-205ENST00000471862 ZNF576Q9H609 170 aa13.25□□□□□ -0.29
COL4A3-205ENST00000471862 KLF18A0A0U1RQI7 1052 aa13.24□□□□□ -0.29
COL4A3-205ENST00000471862 GOLGA8AA7E2F4 631 aa13.24□□□□□ -0.29
COL4A3-205ENST00000471862 GOLGA8BA8MQT2 603 aa13.24□□□□□ -0.29
COL4A3-205ENST00000471862 LGALS2P05162 132 aa13.24□□□□□ -0.29
COL4A3-205ENST00000471862 PTK7Q13308 1070 aa13.24□□□□□ -0.29
COL4A3-205ENST00000471862 RAB30Q15771 203 aa13.24□□□□□ -0.29
COL4A3-205ENST00000471862 PPP1R18Q6NYC8 613 aa13.24□□□□□ -0.29
COL4A3-205ENST00000471862 TRAF7Q6Q0C0 670 aa13.24□□□□□ -0.29
COL4A3-205ENST00000471862 CYFIP1Q7L576 1253 aa13.24□□□□□ -0.29
COL4A3-205ENST00000471862 HEATR3Q7Z4Q2 680 aa13.24□□□□□ -0.29
COL4A3-205ENST00000471862 NLRX1Q86UT6 975 aa13.24□□□□□ -0.29
COL4A3-205ENST00000471862 TEX2Q8IWB9 1127 aa13.24□□□□□ -0.29
COL4A3-205ENST00000471862 FBXL16Q8N461 479 aa13.24□□□□□ -0.29
COL4A3-205ENST00000471862 WNT8BQ93098 351 aa13.24□□□□□ -0.29
COL4A3-205ENST00000471862 GPRASP2Q96D09 838 aa13.24□□□□□ -0.29
COL4A3-205ENST00000471862 AGXT2Q9BYV1 514 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms