RNA–Protein interactions for RNA: ENST00000471751.5

SNX4-203, Transcript of sorting nexin 4, humanhuman

TSL 2

Gene SNX4, Length 1,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-203ENST00000471751 RIT2Q99578 217 aa21.48■■□□□ 1.03
SNX4-203ENST00000471751 SENP7Q9BQF6 1050 aa21.48■■□□□ 1.03
SNX4-203ENST00000471751 R3HDMLQ9H3Y0 253 aa21.48■■□□□ 1.03
SNX4-203ENST00000471751 TBC1D22BQ9NU19 505 aa21.48■■□□□ 1.03
SNX4-203ENST00000471751 GOLGA6L4A6NEF3 574 aa21.47■■□□□ 1.03
SNX4-203ENST00000471751 WNT7AO00755 349 aa21.47■■□□□ 1.03
SNX4-203ENST00000471751 FKTNO75072 461 aa21.47■■□□□ 1.03
SNX4-203ENST00000471751 PGK2P07205 417 aa21.47■■□□□ 1.03
SNX4-203ENST00000471751 ITGB5P18084 799 aa21.47■■□□□ 1.03
SNX4-203ENST00000471751 FXR2P51116 673 aaKnown RBP eCLIP21.47■■□□□ 1.03
SNX4-203ENST00000471751 UBE2HP62256 183 aa21.47■■□□□ 1.03
SNX4-203ENST00000471751 TMEM266Q2M3C6 531 aa21.47■■□□□ 1.03
SNX4-203ENST00000471751 PRR16Q569H4 304 aa21.47■■□□□ 1.03
SNX4-203ENST00000471751 GIMAP8Q8ND71 665 aaPredicted RBP21.47■■□□□ 1.03
SNX4-203ENST00000471751 ETNPPLQ8TBG4 499 aa21.47■■□□□ 1.03
SNX4-203ENST00000471751 MAML3Q96JK9 1138 aa21.47■■□□□ 1.03
SNX4-203ENST00000471751 FGD4Q96M96 766 aa21.47■■□□□ 1.03
SNX4-203ENST00000471751 NRBP1Q9UHY1 535 aa21.47■■□□□ 1.03
SNX4-203ENST00000471751 CCDC85CA6NKD9 419 aa21.46■■□□□ 1.03
SNX4-203ENST00000471751 MARCH6O60337 910 aa21.46■■□□□ 1.03
SNX4-203ENST00000471751 MYCLP12524 364 aaPredicted RBP21.46■■□□□ 1.03
SNX4-203ENST00000471751 ME1P48163 572 aa21.46■■□□□ 1.03
SNX4-203ENST00000471751 MTMR1Q13613 665 aa21.46■■□□□ 1.03
SNX4-203ENST00000471751 NBR1Q14596 966 aa21.46■■□□□ 1.03
SNX4-203ENST00000471751 KCTD17Q8N5Z5 321 aa21.46■■□□□ 1.03
SNX4-203ENST00000471751 APBA2Q99767 749 aa21.46■■□□□ 1.03
SNX4-203ENST00000471751 FTOQ9C0B1 505 aaKnown RBP eCLIP21.46■■□□□ 1.03
SNX4-203ENST00000471751 VTA1Q9NP79 307 aa21.46■■□□□ 1.03
SNX4-203ENST00000471751 KCNH7Q9NS40 1196 aa21.46■■□□□ 1.03
SNX4-203ENST00000471751 FBXO2Q9UK22 296 aaPredicted RBP21.46■■□□□ 1.03
SNX4-203ENST00000471751 PCDHA7Q9UN72 937 aa21.46■■□□□ 1.03
SNX4-203ENST00000471751 PCDHA12Q9UN75 941 aa21.46■■□□□ 1.03
SNX4-203ENST00000471751 CASP8AP2Q9UKL3 1982 aa21.46■■□□□ 1.03
SNX4-203ENST00000471751 ASTN1O14525 1302 aa21.45■■□□□ 1.03
SNX4-203ENST00000471751 KIAA1217Q5T5P2 1943 aa21.45■■□□□ 1.02
SNX4-203ENST00000471751 SPATA31C2B4DYI2 1134 aa21.45■■□□□ 1.02
SNX4-203ENST00000471751 SLC37A4O43826 429 aa21.45■■□□□ 1.02
SNX4-203ENST00000471751 CMA1P23946 247 aa21.45■■□□□ 1.02
SNX4-203ENST00000471751 POTEDQ86YR6 584 aa21.45■■□□□ 1.02
SNX4-203ENST00000471751 IL31RAQ8NI17 732 aa21.45■■□□□ 1.02
SNX4-203ENST00000471751 HAS1Q92839 578 aa21.45■■□□□ 1.02
SNX4-203ENST00000471751 SLC5A5Q92911 643 aa21.45■■□□□ 1.02
SNX4-203ENST00000471751 PURBQ96QR8 312 aaKnown RBP21.45■■□□□ 1.02
SNX4-203ENST00000471751 PYM1Q9BRP8 204 aaKnown RBP21.45■■□□□ 1.02
SNX4-203ENST00000471751 TINF2Q9BSI4 451 aa21.45■■□□□ 1.02
SNX4-203ENST00000471751 WDR11Q9BZH6 1224 aa21.45■■□□□ 1.02
SNX4-203ENST00000471751 TMEM60Q9H2L4 133 aa21.45■■□□□ 1.02
SNX4-203ENST00000471751 ABHD16BQ9H3Z7 469 aa21.45■■□□□ 1.02
SNX4-203ENST00000471751 LMBRD1Q9NUN5 540 aa21.45■■□□□ 1.02
SNX4-203ENST00000471751 NFASCO94856 1347 aa21.45■■□□□ 1.02
SNX4-203ENST00000471751 MSH4O15457 936 aa21.44■■□□□ 1.02
SNX4-203ENST00000471751 PRPF40AO75400 957 aaKnown RBP21.44■■□□□ 1.02
SNX4-203ENST00000471751 IGHA2P01877 340 aa21.44■■□□□ 1.02
SNX4-203ENST00000471751 SKOR2Q2VWA4 1001 aaPredicted RBP21.44■■□□□ 1.02
SNX4-203ENST00000471751 AXDND1Q5T1B0 1012 aaPredicted RBP21.44■■□□□ 1.02
SNX4-203ENST00000471751 IGSF22Q8N9C0 903 aa21.44■■□□□ 1.02
SNX4-203ENST00000471751 TRIM47Q96LD4 638 aa21.44■■□□□ 1.02
SNX4-203ENST00000471751 FAM237AA0A1B0GTK4 181 aa21.43■■□□□ 1.02
SNX4-203ENST00000471751 RBM47A0AV96 593 aaKnown RBP21.43■■□□□ 1.02
SNX4-203ENST00000471751 IPO5O00410 1097 aaKnown RBP21.43■■□□□ 1.02
SNX4-203ENST00000471751 UBXN2AP68543 259 aa21.43■■□□□ 1.02
SNX4-203ENST00000471751 ARMCX2Q7L311 632 aa21.43■■□□□ 1.02
SNX4-203ENST00000471751 CYP2W1Q8TAV3 490 aa21.43■■□□□ 1.02
SNX4-203ENST00000471751 ZNF577Q9BSK1 485 aa21.43■■□□□ 1.02
SNX4-203ENST00000471751 TTC12Q9H892 705 aaPredicted RBP21.43■■□□□ 1.02
SNX4-203ENST00000471751 PSMD10O75832 226 aa21.42■■□□□ 1.02
SNX4-203ENST00000471751 RGS20O76081 388 aa21.42■■□□□ 1.02
SNX4-203ENST00000471751 MBD3O95983 291 aa21.42■■□□□ 1.02
SNX4-203ENST00000471751 MARCKSP29966 332 aaPredicted RBP21.42■■□□□ 1.02
SNX4-203ENST00000471751 NEDD9Q14511 834 aa21.42■■□□□ 1.02
SNX4-203ENST00000471751 ZNF296Q8WUU4 475 aaPredicted RBP21.42■■□□□ 1.02
SNX4-203ENST00000471751 GDPD2Q9HCC8 539 aa21.42■■□□□ 1.02
SNX4-203ENST00000471751 AGO4Q9HCK5 861 aaKnown RBP21.42■■□□□ 1.02
SNX4-203ENST00000471751 SRRDQ9UH36 339 aa21.42■■□□□ 1.02
SNX4-203ENST00000471751 MUTP22033 750 aa21.41■■□□□ 1.02
SNX4-203ENST00000471751 CTGFP29279 349 aa21.41■■□□□ 1.02
SNX4-203ENST00000471751 TXKP42681 527 aa21.41■■□□□ 1.02
SNX4-203ENST00000471751 PPP2R5CQ13362 524 aa21.41■■□□□ 1.02
SNX4-203ENST00000471751 RDM1Q8NG50 284 aa21.41■■□□□ 1.02
SNX4-203ENST00000471751 NPLOC4Q8TAT6 608 aa21.41■■□□□ 1.02
SNX4-203ENST00000471751 SCFD2Q8WU76 684 aa21.41■■□□□ 1.02
SNX4-203ENST00000471751 CHAMP1Q96JM3 812 aa21.41■■□□□ 1.02
SNX4-203ENST00000471751 CCSER1Q9C0I3 900 aa21.41■■□□□ 1.02
SNX4-203ENST00000471751 FAM13BQ9NYF5 915 aa21.41■■□□□ 1.02
SNX4-203ENST00000471751 NKRFO15226 690 aaKnown RBP eCLIP21.4■■□□□ 1.02
SNX4-203ENST00000471751 ARP10275 920 aa21.4■■□□□ 1.02
SNX4-203ENST00000471751 TTLL4Q14679 1199 aa21.4■■□□□ 1.02
SNX4-203ENST00000471751 NFKBIBQ15653 356 aa21.4■■□□□ 1.02
SNX4-203ENST00000471751 RESP18Q5W5W9 173 aa21.4■■□□□ 1.02
SNX4-203ENST00000471751 IQSEC1Q6DN90 963 aa21.4■■□□□ 1.02
SNX4-203ENST00000471751 B3GNT9Q6UX72 402 aa21.4■■□□□ 1.02
SNX4-203ENST00000471751 OTOP1Q7RTM1 612 aa21.4■■□□□ 1.02
SNX4-203ENST00000471751 PXYLP1Q8TE99 480 aa21.4■■□□□ 1.02
SNX4-203ENST00000471751 TEKT3Q9BXF9 490 aa21.4■■□□□ 1.02
SNX4-203ENST00000471751 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.4■■□□□ 1.02
SNX4-203ENST00000471751 TCEAL9Q9UHQ7 104 aa21.4■■□□□ 1.02
SNX4-203ENST00000471751 MCM3APO60318 1980 aa21.39■■□□□ 1.02
SNX4-203ENST00000471751 VWA3AA6NCI4 1184 aa21.39■■□□□ 1.01
SNX4-203ENST00000471751 DHX15O43143 795 aaKnown RBP21.39■■□□□ 1.01
SNX4-203ENST00000471751 GAS7O60861 476 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms