RNA–Protein interactions for RNA: ENST00000471655.1

VPS8-221, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 434 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-221ENST00000471655 CDX2Q99626 313 aaPredicted RBP17.25■□□□□ 0.35
VPS8-221ENST00000471655 PSTPIP2Q9H939 334 aa17.25■□□□□ 0.35
VPS8-221ENST00000471655 GTF2IRD1Q9UHL9 959 aa17.25■□□□□ 0.35
VPS8-221ENST00000471655 COL6A3P12111 3177 aa17.24■□□□□ 0.35
VPS8-221ENST00000471655 MYH7BA7E2Y1 1941 aa17.24■□□□□ 0.35
VPS8-221ENST00000471655 DNAJB2P25686 324 aa17.24■□□□□ 0.35
VPS8-221ENST00000471655 PSEN2P49810 448 aa17.24■□□□□ 0.35
VPS8-221ENST00000471655 RBL2Q08999 1139 aa17.24■□□□□ 0.35
VPS8-221ENST00000471655 HSDL1Q3SXM5 330 aa17.24■□□□□ 0.35
VPS8-221ENST00000471655 GDF6Q6KF10 455 aaPredicted RBP17.24■□□□□ 0.35
VPS8-221ENST00000471655 MICU3Q86XE3 530 aa17.24■□□□□ 0.35
VPS8-221ENST00000471655 CCDC155Q8N6L0 562 aa17.24■□□□□ 0.35
VPS8-221ENST00000471655 RETREG2Q8NC44 543 aa17.24■□□□□ 0.35
VPS8-221ENST00000471655 CAGE1Q8TC20 777 aa17.24■□□□□ 0.35
VPS8-221ENST00000471655 SCLYQ96I15 445 aa17.24■□□□□ 0.35
VPS8-221ENST00000471655 CTAGE1Q96RT6 745 aa17.24■□□□□ 0.35
VPS8-221ENST00000471655 MLXIPQ9HAP2 919 aa17.24■□□□□ 0.35
VPS8-221ENST00000471655 NOD1Q9Y239 953 aa17.24■□□□□ 0.35
VPS8-221ENST00000471655 FIBPO43427 364 aa17.23■□□□□ 0.35
VPS8-221ENST00000471655 IQCF3P0C7M6 154 aa17.23■□□□□ 0.35
VPS8-221ENST00000471655 HSPA4P34932 840 aa17.23■□□□□ 0.35
VPS8-221ENST00000471655 NEDD9Q14511 834 aa17.23■□□□□ 0.35
VPS8-221ENST00000471655 MFSD10Q14728 455 aa17.23■□□□□ 0.35
VPS8-221ENST00000471655 C7orf31Q8N865 590 aa17.23■□□□□ 0.35
VPS8-221ENST00000471655 SLC17A8Q8NDX2 589 aa17.23■□□□□ 0.35
VPS8-221ENST00000471655 PPP1R13LQ8WUF5 828 aa17.23■□□□□ 0.35
VPS8-221ENST00000471655 GPKOWQ92917 476 aaPredicted RBP eCLIP17.23■□□□□ 0.35
VPS8-221ENST00000471655 ZFP91Q96JP5 570 aaPredicted RBP17.23■□□□□ 0.35
VPS8-221ENST00000471655 SENP7Q9BQF6 1050 aa17.23■□□□□ 0.35
VPS8-221ENST00000471655 CXXC1Q9P0U4 656 aaPredicted RBP17.23■□□□□ 0.35
VPS8-221ENST00000471655 HDAC6Q9UBN7 1215 aa17.23■□□□□ 0.35
VPS8-221ENST00000471655 BRPF3Q9ULD4 1205 aa17.23■□□□□ 0.35
VPS8-221ENST00000471655 ZBTB43O43298 467 aa17.22■□□□□ 0.35
VPS8-221ENST00000471655 EPB41L2O43491 1005 aaKnown RBP17.22■□□□□ 0.35
VPS8-221ENST00000471655 PARNO95453 639 aaKnown RBP17.22■□□□□ 0.35
VPS8-221ENST00000471655 FUT2Q10981 343 aa17.22■□□□□ 0.35
VPS8-221ENST00000471655 SEMA3FQ13275 785 aa17.22■□□□□ 0.35
VPS8-221ENST00000471655 RAB30Q15771 203 aa17.22■□□□□ 0.35
VPS8-221ENST00000471655 KIAA0753Q2KHM9 967 aa17.22■□□□□ 0.35
VPS8-221ENST00000471655 METTL7BQ6UX53 244 aa17.22■□□□□ 0.35
VPS8-221ENST00000471655 OTOP2Q7RTS6 562 aa17.22■□□□□ 0.35
VPS8-221ENST00000471655 RAB11FIP4Q86YS3 637 aa17.22■□□□□ 0.35
VPS8-221ENST00000471655 FBXL16Q8N461 479 aa17.22■□□□□ 0.35
VPS8-221ENST00000471655 CCDC82Q8N4S0 544 aa17.22■□□□□ 0.35
VPS8-221ENST00000471655 AFAP1L1Q8TED9 768 aa17.22■□□□□ 0.35
VPS8-221ENST00000471655 TIFAQ96CG3 184 aa17.22■□□□□ 0.35
VPS8-221ENST00000471655 C16orf70Q9BSU1 422 aa17.22■□□□□ 0.35
VPS8-221ENST00000471655 PBX4Q9BYU1 374 aa17.22■□□□□ 0.35
VPS8-221ENST00000471655 GRXCR1A8MXD5 290 aa17.21■□□□□ 0.35
VPS8-221ENST00000471655 ZNF286BP0CG31 522 aa17.21■□□□□ 0.35
VPS8-221ENST00000471655 CHMP4BP1P59074 171 aa17.21■□□□□ 0.35
VPS8-221ENST00000471655 PTK7Q13308 1070 aa17.21■□□□□ 0.35
VPS8-221ENST00000471655 RTN1Q16799 776 aa17.21■□□□□ 0.35
VPS8-221ENST00000471655 NLRX1Q86UT6 975 aa17.21■□□□□ 0.35
VPS8-221ENST00000471655 GIMAP8Q8ND71 665 aaPredicted RBP17.21■□□□□ 0.35
VPS8-221ENST00000471655 TCEANC2Q96MN5 208 aa17.21■□□□□ 0.35
VPS8-221ENST00000471655 ALG1Q9BT22 464 aa17.21■□□□□ 0.35
VPS8-221ENST00000471655 ZNF576Q9H609 170 aa17.21■□□□□ 0.35
VPS8-221ENST00000471655 RTEL1Q9NZ71 1219 aa17.21■□□□□ 0.35
VPS8-221ENST00000471655 SLC4A7Q9Y6M7 1214 aa17.21■□□□□ 0.35
VPS8-221ENST00000471655 CNTNAP5Q8WYK1 1306 aa17.21■□□□□ 0.34
VPS8-221ENST00000471655 hCG_1642624A0A1W2PR95 340 aa17.2■□□□□ 0.34
VPS8-221ENST00000471655 hCG_1984214I3L0E3 225 aa17.2■□□□□ 0.34
VPS8-221ENST00000471655 REC8O95072 547 aa17.2■□□□□ 0.34
VPS8-221ENST00000471655 ACTN1P12814 892 aa17.2■□□□□ 0.34
VPS8-221ENST00000471655 PPP1R18Q6NYC8 613 aa17.2■□□□□ 0.34
VPS8-221ENST00000471655 ZNF713Q8N859 430 aaPredicted RBP17.2■□□□□ 0.34
VPS8-221ENST00000471655 DHX38Q92620 1227 aaKnown RBP17.2■□□□□ 0.34
VPS8-221ENST00000471655 GPRASP2Q96D09 838 aa17.2■□□□□ 0.34
VPS8-221ENST00000471655 CDHR1Q96JP9 859 aa17.2■□□□□ 0.34
VPS8-221ENST00000471655 USP26Q9BXU7 913 aa17.2■□□□□ 0.34
VPS8-221ENST00000471655 BCAS3Q9H6U6 928 aa17.2■□□□□ 0.34
VPS8-221ENST00000471655 FAM217BQ9NTX9 383 aaPredicted RBP17.2■□□□□ 0.34
VPS8-221ENST00000471655 MSRAQ9UJ68 235 aa17.2■□□□□ 0.34
VPS8-221ENST00000471655 TANC1Q9C0D5 1861 aa17.19■□□□□ 0.34
VPS8-221ENST00000471655 KLF18A0A0U1RQI7 1052 aa17.19■□□□□ 0.34
VPS8-221ENST00000471655 SPDYE3A6NKU9 549 aa17.19■□□□□ 0.34
VPS8-221ENST00000471655 H3BRB1 525 aa17.19■□□□□ 0.34
VPS8-221ENST00000471655 NOP56O00567 594 aaKnown RBP17.19■□□□□ 0.34
VPS8-221ENST00000471655 MAFGO15525 162 aa17.19■□□□□ 0.34
VPS8-221ENST00000471655 SELPP16109 830 aa17.19■□□□□ 0.34
VPS8-221ENST00000471655 HOXC8P31273 242 aa17.19■□□□□ 0.34
VPS8-221ENST00000471655 PBX2P40425 430 aa17.19■□□□□ 0.34
VPS8-221ENST00000471655 CYFIP1Q7L576 1253 aa17.19■□□□□ 0.34
VPS8-221ENST00000471655 HEATR3Q7Z4Q2 680 aa17.19■□□□□ 0.34
VPS8-221ENST00000471655 DEFB128Q7Z7B8 93 aa17.19■□□□□ 0.34
VPS8-221ENST00000471655 GPR20Q99678 358 aa17.19■□□□□ 0.34
VPS8-221ENST00000471655 TUT1Q9H6E5 874 aaKnown RBP17.19■□□□□ 0.34
VPS8-221ENST00000471655 PCDHA6Q9UN73 950 aa17.19■□□□□ 0.34
VPS8-221ENST00000471655 PCDHA8Q9Y5H6 950 aa17.19■□□□□ 0.34
VPS8-221ENST00000471655 SNX14Q9Y5W7 946 aa17.19■□□□□ 0.34
VPS8-221ENST00000471655 CCDC196A0A1B0GTZ2 297 aa17.18■□□□□ 0.34
VPS8-221ENST00000471655 GOLGA8AA7E2F4 631 aa17.18■□□□□ 0.34
VPS8-221ENST00000471655 GOLGA8BA8MQT2 603 aa17.18■□□□□ 0.34
VPS8-221ENST00000471655 SORBS3O60504 671 aa17.18■□□□□ 0.34
VPS8-221ENST00000471655 LGALS2P05162 132 aa17.18■□□□□ 0.34
VPS8-221ENST00000471655 NEFLP07196 543 aa17.18■□□□□ 0.34
VPS8-221ENST00000471655 CKBP12277 381 aa17.18■□□□□ 0.34
VPS8-221ENST00000471655 GRIN2CQ14957 1233 aa17.18■□□□□ 0.34
VPS8-221ENST00000471655 TRIM71Q2Q1W2 868 aaKnown RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms