RNA–Protein interactions for RNA: ENST00000471363.5

CACNA2D3-204, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 3, humanhuman

TSL 1 (best)

Gene CACNA2D3, Length 3,477 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D3-204ENST00000471363 SH3GLB2Q9NR46 395 aa6.85□□□□□ -1.31
CACNA2D3-204ENST00000471363 PLAAQ9Y263 795 aa6.85□□□□□ -1.31
CACNA2D3-204ENST00000471363 COL5A2P05997 1499 aaPredicted RBP6.85□□□□□ -1.31
CACNA2D3-204ENST00000471363 HMGB1P1B2RPK0 211 aaPredicted RBP6.85□□□□□ -1.31
CACNA2D3-204ENST00000471363 ERVV-1B6SEH8 477 aa6.85□□□□□ -1.31
CACNA2D3-204ENST00000471363 TRADDQ15628 312 aa6.85□□□□□ -1.31
CACNA2D3-204ENST00000471363 KLHL7Q8IXQ5 586 aa6.85□□□□□ -1.31
CACNA2D3-204ENST00000471363 WHAMMQ8TF30 809 aa6.85□□□□□ -1.31
CACNA2D3-204ENST00000471363 BAP1Q92560 729 aa6.85□□□□□ -1.31
CACNA2D3-204ENST00000471363 SLC4A9Q96Q91 983 aa6.85□□□□□ -1.31
CACNA2D3-204ENST00000471363 VCPKMTQ9H867 229 aa6.85□□□□□ -1.31
CACNA2D3-204ENST00000471363 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.85□□□□□ -1.31
CACNA2D3-204ENST00000471363 RNF14Q9UBS8 474 aa6.85□□□□□ -1.31
CACNA2D3-204ENST00000471363 PACSIN2Q9UNF0 486 aaPredicted RBP6.85□□□□□ -1.31
CACNA2D3-204ENST00000471363 SHANK3Q9BYB0 1731 aa6.85□□□□□ -1.31
CACNA2D3-204ENST00000471363 LAD1O00515 517 aa6.85□□□□□ -1.31
CACNA2D3-204ENST00000471363 CCNT1O60563 726 aaKnown RBP6.85□□□□□ -1.31
CACNA2D3-204ENST00000471363 IBSPP21815 317 aaPredicted RBP6.85□□□□□ -1.31
CACNA2D3-204ENST00000471363 PRPHP41219 470 aa6.85□□□□□ -1.31
CACNA2D3-204ENST00000471363 TECP42680 631 aa6.85□□□□□ -1.31
CACNA2D3-204ENST00000471363 CDR1P51861 262 aa6.85□□□□□ -1.31
CACNA2D3-204ENST00000471363 ACTN3Q08043 901 aaPredicted RBP6.85□□□□□ -1.31
CACNA2D3-204ENST00000471363 ENOX2Q16206 610 aaKnown RBP6.85□□□□□ -1.31
CACNA2D3-204ENST00000471363 CCDC40Q4G0X9 1142 aa6.85□□□□□ -1.31
CACNA2D3-204ENST00000471363 YTHDF3Q7Z739 585 aaKnown RBP6.85□□□□□ -1.31
CACNA2D3-204ENST00000471363 CD302Q8IX05 232 aa6.85□□□□□ -1.31
CACNA2D3-204ENST00000471363 CCDC13Q8IYE1 715 aa6.85□□□□□ -1.31
CACNA2D3-204ENST00000471363 MREGQ8N565 214 aa6.85□□□□□ -1.31
CACNA2D3-204ENST00000471363 RNF10Q8N5U6 811 aaKnown RBP6.85□□□□□ -1.31
CACNA2D3-204ENST00000471363 PNMA1Q8ND90 353 aa6.85□□□□□ -1.31
CACNA2D3-204ENST00000471363 GIMAP7Q8NHV1 300 aa6.85□□□□□ -1.31
CACNA2D3-204ENST00000471363 AK8Q96MA6 479 aa6.85□□□□□ -1.31
CACNA2D3-204ENST00000471363 WTIPA6NIX2 430 aaPredicted RBP6.84□□□□□ -1.31
CACNA2D3-204ENST00000471363 CHUKO15111 745 aa6.84□□□□□ -1.31
CACNA2D3-204ENST00000471363 FGFR1OPO95684 399 aaKnown RBP6.84□□□□□ -1.31
CACNA2D3-204ENST00000471363 FAM107AO95990 144 aa6.84□□□□□ -1.31
CACNA2D3-204ENST00000471363 EHHADHQ08426 723 aa6.84□□□□□ -1.31
CACNA2D3-204ENST00000471363 SLC9C1Q4G0N8 1177 aa6.84□□□□□ -1.31
CACNA2D3-204ENST00000471363 CENPPQ6IPU0 288 aa6.84□□□□□ -1.31
CACNA2D3-204ENST00000471363 RCSD1Q6JBY9 416 aa6.84□□□□□ -1.31
CACNA2D3-204ENST00000471363 CCDC121Q6ZUS5 278 aa6.84□□□□□ -1.31
CACNA2D3-204ENST00000471363 DYMQ7RTS9 669 aa6.84□□□□□ -1.31
CACNA2D3-204ENST00000471363 CALML4Q96GE6 196 aa6.84□□□□□ -1.31
CACNA2D3-204ENST00000471363 CCDC114Q96M63 670 aa6.84□□□□□ -1.31
CACNA2D3-204ENST00000471363 PAGR1Q9BTK6 254 aa6.84□□□□□ -1.31
CACNA2D3-204ENST00000471363 CRNKL1Q9BZJ0 848 aaKnown RBP6.84□□□□□ -1.31
CACNA2D3-204ENST00000471363 DCP1AQ9NPI6 582 aaPredicted RBP6.84□□□□□ -1.31
CACNA2D3-204ENST00000471363 LUC7LQ9NQ29 371 aaKnown RBP6.84□□□□□ -1.31
CACNA2D3-204ENST00000471363 KLC4Q9NSK0 619 aa6.84□□□□□ -1.31
CACNA2D3-204ENST00000471363 CASZ1Q86V15 1759 aa6.84□□□□□ -1.31
CACNA2D3-204ENST00000471363 CACNA1SQ13698 1873 aa6.84□□□□□ -1.31
CACNA2D3-204ENST00000471363 COL1A1P02452 1464 aaPredicted RBP6.84□□□□□ -1.31
CACNA2D3-204ENST00000471363 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.84□□□□□ -1.31
CACNA2D3-204ENST00000471363 SSU72P8A0A1W2PR75 194 aa6.84□□□□□ -1.31
CACNA2D3-204ENST00000471363 CCDC189A1A4V9 331 aa6.84□□□□□ -1.31
CACNA2D3-204ENST00000471363 M0R2N6 131 aa6.84□□□□□ -1.31
CACNA2D3-204ENST00000471363 RAD51CO43502 376 aa6.84□□□□□ -1.31
CACNA2D3-204ENST00000471363 PAX7P23759 505 aa6.84□□□□□ -1.31
CACNA2D3-204ENST00000471363 PAX3P23760 479 aa6.84□□□□□ -1.31
CACNA2D3-204ENST00000471363 TNNC1P63316 161 aa6.84□□□□□ -1.31
CACNA2D3-204ENST00000471363 ARID5AQ03989 594 aa6.84□□□□□ -1.31
CACNA2D3-204ENST00000471363 DDR1Q08345 913 aa6.84□□□□□ -1.31
CACNA2D3-204ENST00000471363 ITGB3BPQ13352 177 aaPredicted RBP6.84□□□□□ -1.31
CACNA2D3-204ENST00000471363 CAVIN4Q5BKX8 364 aa6.84□□□□□ -1.31
CACNA2D3-204ENST00000471363 ARFGAP2Q8N6H7 521 aa6.84□□□□□ -1.31
CACNA2D3-204ENST00000471363 ZNF384Q8TF68 577 aa6.84□□□□□ -1.31
CACNA2D3-204ENST00000471363 ZKSCAN4Q969J2 545 aaPredicted RBP6.84□□□□□ -1.31
CACNA2D3-204ENST00000471363 CYFIP2Q96F07 1278 aa6.84□□□□□ -1.31
CACNA2D3-204ENST00000471363 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.84□□□□□ -1.31
CACNA2D3-204ENST00000471363 SLIT2O94813 1529 aa6.84□□□□□ -1.31
CACNA2D3-204ENST00000471363 GOLGA6L7A0A1B0GV03 622 aa6.84□□□□□ -1.32
CACNA2D3-204ENST00000471363 GRID2IPA4D2P6 1211 aa6.84□□□□□ -1.32
CACNA2D3-204ENST00000471363 GCOM1H8Y6P7 765 aaPredicted RBP6.84□□□□□ -1.32
CACNA2D3-204ENST00000471363 PPP1R12AO14974 1030 aaPredicted RBP6.84□□□□□ -1.32
CACNA2D3-204ENST00000471363 KIF1CO43896 1103 aaKnown RBP6.84□□□□□ -1.32
CACNA2D3-204ENST00000471363 CAND2O75155 1236 aa6.84□□□□□ -1.32
CACNA2D3-204ENST00000471363 MYZAPP0CAP1 466 aa6.84□□□□□ -1.32
CACNA2D3-204ENST00000471363 KLRC1P26715 233 aa6.84□□□□□ -1.32
CACNA2D3-204ENST00000471363 IL6STP40189 918 aaPredicted RBP6.84□□□□□ -1.32
CACNA2D3-204ENST00000471363 SMTNP53814 917 aa6.84□□□□□ -1.32
CACNA2D3-204ENST00000471363 SARNPP82979 210 aaKnown RBP6.84□□□□□ -1.32
CACNA2D3-204ENST00000471363 TFAP4Q01664 338 aa6.84□□□□□ -1.32
CACNA2D3-204ENST00000471363 CDC37Q16543 378 aaPredicted RBP6.84□□□□□ -1.32
CACNA2D3-204ENST00000471363 ASTE1Q2TB18 679 aaPredicted RBP6.84□□□□□ -1.32
CACNA2D3-204ENST00000471363 SFMBT2Q5VUG0 894 aa6.84□□□□□ -1.32
CACNA2D3-204ENST00000471363 SV2BQ7L1I2 683 aa6.84□□□□□ -1.32
CACNA2D3-204ENST00000471363 OR2W6PQ8NHA6 318 aa6.84□□□□□ -1.32
CACNA2D3-204ENST00000471363 TAF4BQ92750 862 aa6.84□□□□□ -1.32
CACNA2D3-204ENST00000471363 TMBIM4Q9HC24 238 aa6.84□□□□□ -1.32
CACNA2D3-204ENST00000471363 SLC40A1Q9NP59 571 aa6.84□□□□□ -1.32
CACNA2D3-204ENST00000471363 ZNF804BA4D1E1 1349 aa6.84□□□□□ -1.32
CACNA2D3-204ENST00000471363 A0A1B0GUL6 1792 aa6.83□□□□□ -1.32
CACNA2D3-204ENST00000471363 STXBP3O00186 592 aa6.83□□□□□ -1.32
CACNA2D3-204ENST00000471363 SSBP05455 408 aaKnown RBP eCLIP6.83□□□□□ -1.32
CACNA2D3-204ENST00000471363 HSPA9P38646 679 aaKnown RBP6.83□□□□□ -1.32
CACNA2D3-204ENST00000471363 GNAQP50148 359 aa6.83□□□□□ -1.32
CACNA2D3-204ENST00000471363 NAPAP54920 295 aa6.83□□□□□ -1.32
CACNA2D3-204ENST00000471363 NONOQ15233 471 aaKnown RBP eCLIP6.83□□□□□ -1.32
CACNA2D3-204ENST00000471363 ZRSR2Q15696 482 aaKnown RBP6.83□□□□□ -1.32
CACNA2D3-204ENST00000471363 ODF2Q5BJF6 829 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms