RNA–Protein interactions for RNA: ENST00000471234.5

TNPO3-203, Transcript of transportin 3, humanhuman

TSL 1 (best) BASIC

Gene TNPO3, Length 3,283 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO3-203ENST00000471234 CEP55Q53EZ4 464 aa10.04□□□□□ -0.8
TNPO3-203ENST00000471234 KCNK18Q7Z418 384 aa10.04□□□□□ -0.8
TNPO3-203ENST00000471234 DHX40Q8IX18 779 aaKnown RBP10.04□□□□□ -0.8
TNPO3-203ENST00000471234 ANKRD20A12PQ8NF67 263 aa10.04□□□□□ -0.8
TNPO3-203ENST00000471234 IL31RAQ8NI17 732 aa10.04□□□□□ -0.8
TNPO3-203ENST00000471234 NELFBQ8WX92 580 aa10.04□□□□□ -0.8
TNPO3-203ENST00000471234 HAS1Q92839 578 aa10.04□□□□□ -0.8
TNPO3-203ENST00000471234 GCFC2P16383 781 aaKnown RBP10.04□□□□□ -0.8
TNPO3-203ENST00000471234 BMP6P22004 513 aa10.04□□□□□ -0.8
TNPO3-203ENST00000471234 ZNF75DP51815 510 aa10.04□□□□□ -0.8
TNPO3-203ENST00000471234 IQCB1Q15051 598 aa10.04□□□□□ -0.8
TNPO3-203ENST00000471234 ZNF592Q92610 1267 aa10.04□□□□□ -0.8
TNPO3-203ENST00000471234 PYM1Q9BRP8 204 aaKnown RBP10.04□□□□□ -0.8
TNPO3-203ENST00000471234 MAGEC2Q9UBF1 373 aaPredicted RBP10.04□□□□□ -0.8
TNPO3-203ENST00000471234 PSME4Q14997 1843 aa10.04□□□□□ -0.8
TNPO3-203ENST00000471234 C19orf81C9J6K1 198 aa10.03□□□□□ -0.8
TNPO3-203ENST00000471234 IPO5O00410 1097 aaKnown RBP10.03□□□□□ -0.8
TNPO3-203ENST00000471234 N4BP3O15049 544 aa10.03□□□□□ -0.8
TNPO3-203ENST00000471234 TPM3P06753 285 aa10.03□□□□□ -0.8
TNPO3-203ENST00000471234 PGK2P07205 417 aa10.03□□□□□ -0.8
TNPO3-203ENST00000471234 USP11P51784 963 aa10.03□□□□□ -0.8
TNPO3-203ENST00000471234 SLFN12Q8IYM2 578 aa10.03□□□□□ -0.8
TNPO3-203ENST00000471234 MLKLQ8NB16 471 aa10.03□□□□□ -0.8
TNPO3-203ENST00000471234 DDX12PQ92771 950 aa10.03□□□□□ -0.8
TNPO3-203ENST00000471234 RANBP17Q9H2T7 1088 aaKnown RBP10.03□□□□□ -0.8
TNPO3-203ENST00000471234 OPLAHO14841 1288 aa10.03□□□□□ -0.8
TNPO3-203ENST00000471234 CAVIN2O95810 425 aa10.03□□□□□ -0.8
TNPO3-203ENST00000471234 PSMC6P62333 389 aa10.03□□□□□ -0.8
TNPO3-203ENST00000471234 CNTN2Q02246 1040 aa10.03□□□□□ -0.8
TNPO3-203ENST00000471234 MTMR1Q13613 665 aa10.03□□□□□ -0.8
TNPO3-203ENST00000471234 HAUS3Q68CZ6 603 aa10.03□□□□□ -0.8
TNPO3-203ENST00000471234 BTNL9Q6UXG8 535 aa10.03□□□□□ -0.8
TNPO3-203ENST00000471234 ZNF771Q7L3S4 317 aaPredicted RBP10.03□□□□□ -0.8
TNPO3-203ENST00000471234 MIER3Q7Z3K6 550 aa10.03□□□□□ -0.8
TNPO3-203ENST00000471234 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.03□□□□□ -0.86e-7■□□□□ 8.7
TNPO3-203ENST00000471234 DYDC2Q96IM9 177 aa10.03□□□□□ -0.8
TNPO3-203ENST00000471234 RMND1Q9NWS8 449 aa10.03□□□□□ -0.8
TNPO3-203ENST00000471234 TRMT1Q9NXH9 659 aaKnown RBP10.03□□□□□ -0.8
TNPO3-203ENST00000471234 COL20A1Q9P218 1284 aa10.03□□□□□ -0.8
TNPO3-203ENST00000471234 SYNRGQ9UMZ2 1314 aa10.03□□□□□ -0.8
TNPO3-203ENST00000471234 MAST2Q6P0Q8 1798 aa10.03□□□□□ -0.8
TNPO3-203ENST00000471234 SMCHD1A6NHR9 2005 aa10.03□□□□□ -0.8
TNPO3-203ENST00000471234 LTBP1Q14766 1721 aa10.03□□□□□ -0.8
TNPO3-203ENST00000471234 PSMA7O14818 248 aa10.02□□□□□ -0.8
TNPO3-203ENST00000471234 KIF20AO95235 890 aa10.02□□□□□ -0.8
TNPO3-203ENST00000471234 CD44P16070 742 aaKnown RBP10.02□□□□□ -0.8
TNPO3-203ENST00000471234 PRCPP42785 496 aa10.02□□□□□ -0.8
TNPO3-203ENST00000471234 TMEM132BQ14DG7 1078 aa10.02□□□□□ -0.8
TNPO3-203ENST00000471234 AK8Q96MA6 479 aa10.02□□□□□ -0.8
TNPO3-203ENST00000471234 MTRQ99707 1265 aa10.02□□□□□ -0.8
TNPO3-203ENST00000471234 SRRTQ9BXP5 876 aaKnown RBP10.02□□□□□ -0.8
TNPO3-203ENST00000471234 TEX13BQ9BXU2 312 aa10.02□□□□□ -0.8
TNPO3-203ENST00000471234 MMRN2Q9H8L6 949 aa10.02□□□□□ -0.8
TNPO3-203ENST00000471234 SLC38A10Q9HBR0 1119 aa10.02□□□□□ -0.8
TNPO3-203ENST00000471234 TAB2Q9NYJ8 693 aa10.02□□□□□ -0.8
TNPO3-203ENST00000471234 SNCAIPQ9Y6H5 919 aa10.02□□□□□ -0.8
TNPO3-203ENST00000471234 TBCAO75347 108 aaKnown RBP10.02□□□□□ -0.81
TNPO3-203ENST00000471234 MED24O75448 989 aa10.02□□□□□ -0.81
TNPO3-203ENST00000471234 PLA2G4BP0C869 781 aa10.02□□□□□ -0.81
TNPO3-203ENST00000471234 MTIF2P46199 727 aaKnown RBP10.02□□□□□ -0.81
TNPO3-203ENST00000471234 PAK1Q13153 545 aa10.02□□□□□ -0.81
TNPO3-203ENST00000471234 GRB10Q13322 594 aa10.02□□□□□ -0.81
TNPO3-203ENST00000471234 ECM1Q16610 540 aa10.02□□□□□ -0.81
TNPO3-203ENST00000471234 FILIP1LQ4L180 1135 aa10.02□□□□□ -0.81
TNPO3-203ENST00000471234 USP50Q70EL3 339 aaPredicted RBP10.02□□□□□ -0.81
TNPO3-203ENST00000471234 PNMA8AQ86V59 439 aaPredicted RBP10.02□□□□□ -0.81
TNPO3-203ENST00000471234 FAM177A1Q8N128 213 aaPredicted RBP10.02□□□□□ -0.81
TNPO3-203ENST00000471234 SYTL5Q8TDW5 730 aaPredicted RBP10.02□□□□□ -0.81
TNPO3-203ENST00000471234 MTMR8Q96EF0 704 aa10.02□□□□□ -0.81
TNPO3-203ENST00000471234 GSDMAQ96QA5 445 aa10.02□□□□□ -0.81
TNPO3-203ENST00000471234 PGAP2Q9UHJ9 254 aa10.02□□□□□ -0.81
TNPO3-203ENST00000471234 FAM170AA1A519 330 aa10.02□□□□□ -0.81
TNPO3-203ENST00000471234 MYMKA6NI61 221 aa10.02□□□□□ -0.81
TNPO3-203ENST00000471234 POTEB2H3BUK9 544 aa10.02□□□□□ -0.81
TNPO3-203ENST00000471234 RIOK3O14730 519 aaKnown RBP10.02□□□□□ -0.81
TNPO3-203ENST00000471234 GTF2F1P35269 517 aaKnown RBP eCLIP10.02□□□□□ -0.81
TNPO3-203ENST00000471234 DPYDQ12882 1025 aa10.02□□□□□ -0.81
TNPO3-203ENST00000471234 PPP4R3AQ6IN85 833 aa10.02□□□□□ -0.81
TNPO3-203ENST00000471234 RBM43Q6ZSC3 357 aaKnown RBP10.02□□□□□ -0.81
TNPO3-203ENST00000471234 NLRX1Q86UT6 975 aa10.02□□□□□ -0.81
TNPO3-203ENST00000471234 ERO1BQ86YB8 467 aa10.02□□□□□ -0.81
TNPO3-203ENST00000471234 C2orf69Q8N8R5 385 aa10.02□□□□□ -0.81
TNPO3-203ENST00000471234 NAP1L4Q99733 375 aaKnown RBP10.02□□□□□ -0.81
TNPO3-203ENST00000471234 TEKT3Q9BXF9 490 aa10.02□□□□□ -0.81
TNPO3-203ENST00000471234 KCNH7Q9NS40 1196 aa10.02□□□□□ -0.81
TNPO3-203ENST00000471234 TMEM150BA6NC51 233 aa10.01□□□□□ -0.81
TNPO3-203ENST00000471234 EML1O00423 815 aa10.01□□□□□ -0.81
TNPO3-203ENST00000471234 NRDCO43847 1150 aa10.01□□□□□ -0.81
TNPO3-203ENST00000471234 DSG3P32926 999 aa10.01□□□□□ -0.81
TNPO3-203ENST00000471234 SREBF1P36956 1147 aa10.01□□□□□ -0.81
TNPO3-203ENST00000471234 PRPHP41219 470 aa10.01□□□□□ -0.81
TNPO3-203ENST00000471234 STK4Q13043 487 aa10.01□□□□□ -0.81
TNPO3-203ENST00000471234 ENOX2Q16206 610 aaKnown RBP10.01□□□□□ -0.81
TNPO3-203ENST00000471234 NAALADL2Q58DX5 795 aa10.01□□□□□ -0.81
TNPO3-203ENST00000471234 CATSPER3Q86XQ3 398 aa10.01□□□□□ -0.81
TNPO3-203ENST00000471234 CSGALNACT2Q8N6G5 542 aa10.01□□□□□ -0.81
TNPO3-203ENST00000471234 ANKRD13CQ8N6S4 541 aa10.01□□□□□ -0.81
TNPO3-203ENST00000471234 MTMR9Q96QG7 549 aa10.01□□□□□ -0.81
TNPO3-203ENST00000471234 MMTAG2Q9BU76 263 aaKnown RBP10.01□□□□□ -0.81
TNPO3-203ENST00000471234 WDR18Q9BV38 432 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms