RNA–Protein interactions for RNA: ENST00000471167.1

PRPF40A-206, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-206ENST00000471167 LBX2Q6XYB7 198 aa7.86□□□□□ -1.15
PRPF40A-206ENST00000471167 FAM126BQ8IXS8 530 aa7.86□□□□□ -1.15
PRPF40A-206ENST00000471167 DCAF4Q8WV16 495 aa7.86□□□□□ -1.15
PRPF40A-206ENST00000471167 ZNF652Q9Y2D9 606 aa7.86□□□□□ -1.15
PRPF40A-206ENST00000471167 HGSO14964 777 aaPredicted RBP7.85□□□□□ -1.15
PRPF40A-206ENST00000471167 MYO1BO43795 1136 aa7.85□□□□□ -1.15
PRPF40A-206ENST00000471167 SMAD4Q13485 552 aaKnown RBP7.85□□□□□ -1.15
PRPF40A-206ENST00000471167 RTP5Q14D33 572 aa7.85□□□□□ -1.15
PRPF40A-206ENST00000471167 STYK1Q6J9G0 422 aa7.85□□□□□ -1.15
PRPF40A-206ENST00000471167 ETV3LQ6ZN32 361 aa7.85□□□□□ -1.15
PRPF40A-206ENST00000471167 RBM12BQ8IXT5 1001 aaKnown RBP7.85□□□□□ -1.15
PRPF40A-206ENST00000471167 LRRC47Q8N1G4 583 aaKnown RBP7.85□□□□□ -1.15
PRPF40A-206ENST00000471167 ZBTB38Q8NAP3 1195 aaPredicted RBP7.85□□□□□ -1.15
PRPF40A-206ENST00000471167 ARMC5Q96C12 935 aa7.85□□□□□ -1.15
PRPF40A-206ENST00000471167 CHAMP1Q96JM3 812 aa7.85□□□□□ -1.15
PRPF40A-206ENST00000471167 EXOC2Q96KP1 924 aa7.85□□□□□ -1.15
PRPF40A-206ENST00000471167 C11orf84Q9BUA3 381 aaPredicted RBP7.85□□□□□ -1.15
PRPF40A-206ENST00000471167 AP5M1Q9H0R1 490 aa7.85□□□□□ -1.15
PRPF40A-206ENST00000471167 LUC7LQ9NQ29 371 aaKnown RBP7.85□□□□□ -1.15
PRPF40A-206ENST00000471167 SIRPGQ9P1W8 387 aa7.85□□□□□ -1.15
PRPF40A-206ENST00000471167 FAN1Q9Y2M0 1017 aa7.85□□□□□ -1.15
PRPF40A-206ENST00000471167 TRAF6Q9Y4K3 522 aa7.85□□□□□ -1.15
PRPF40A-206ENST00000471167 LRG1P02750 347 aa7.84□□□□□ -1.15
PRPF40A-206ENST00000471167 MTERF2Q49AM1 385 aa7.84□□□□□ -1.15
PRPF40A-206ENST00000471167 HABP4Q5JVS0 413 aaKnown RBP7.84□□□□□ -1.15
PRPF40A-206ENST00000471167 PRR31Q5SQ13 230 aa7.84□□□□□ -1.15
PRPF40A-206ENST00000471167 STEAP3Q658P3 488 aa7.84□□□□□ -1.15
PRPF40A-206ENST00000471167 CD300LDQ6UXZ3 194 aa7.84□□□□□ -1.15
PRPF40A-206ENST00000471167 ZDHHC14Q8IZN3 488 aa7.84□□□□□ -1.15
PRPF40A-206ENST00000471167 PIP4K2CQ8TBX8 421 aa7.84□□□□□ -1.15
PRPF40A-206ENST00000471167 CLEC4DQ8WXI8 215 aa7.84□□□□□ -1.15
PRPF40A-206ENST00000471167 SPATA25Q9BR10 227 aa7.84□□□□□ -1.15
PRPF40A-206ENST00000471167 TELO2Q9Y4R8 837 aa7.84□□□□□ -1.15
PRPF40A-206ENST00000471167 ITGA1P56199 1179 aa7.83□□□□□ -1.16
PRPF40A-206ENST00000471167 ADAM9Q13443 819 aa7.83□□□□□ -1.16
PRPF40A-206ENST00000471167 PROSER1Q86XN7 944 aa7.83□□□□□ -1.16
PRPF40A-206ENST00000471167 NLGN1Q8N2Q7 840 aa7.83□□□□□ -1.16
PRPF40A-206ENST00000471167 ZBTB8AQ96BR9 441 aa7.83□□□□□ -1.16
PRPF40A-206ENST00000471167 EPB41L1Q9H4G0 881 aa7.83□□□□□ -1.16
PRPF40A-206ENST00000471167 SNTG2Q9NY99 539 aa7.83□□□□□ -1.16
PRPF40A-206ENST00000471167 RBPJLQ9UBG7 517 aa7.83□□□□□ -1.16
PRPF40A-206ENST00000471167 TCRBV5S4A2TA0A5A2 114 aa7.82□□□□□ -1.16
PRPF40A-206ENST00000471167 NKRFO15226 690 aaKnown RBP eCLIP7.82□□□□□ -1.16
PRPF40A-206ENST00000471167 CYP2C8P10632 490 aa7.82□□□□□ -1.16
PRPF40A-206ENST00000471167 COL6A2P12110 1019 aa7.82□□□□□ -1.16
PRPF40A-206ENST00000471167 SSRP1Q08945 709 aaKnown RBP7.82□□□□□ -1.16
PRPF40A-206ENST00000471167 KISS1RQ969F8 398 aaPredicted RBP7.82□□□□□ -1.16
PRPF40A-206ENST00000471167 HIRIP3Q9BW71 556 aaPredicted RBP7.82□□□□□ -1.16
PRPF40A-206ENST00000471167 ASH2LQ9UBL3 628 aa7.82□□□□□ -1.16
PRPF40A-206ENST00000471167 COA3Q9Y2R0 106 aaPredicted RBP7.82□□□□□ -1.16
PRPF40A-206ENST00000471167 LTFP02788 710 aa7.81□□□□□ -1.16
PRPF40A-206ENST00000471167 THBS2P35442 1172 aa7.81□□□□□ -1.16
PRPF40A-206ENST00000471167 GPR85P60893 370 aa7.81□□□□□ -1.16
PRPF40A-206ENST00000471167 IFRD2Q12894 506 aaPredicted RBP7.81□□□□□ -1.16
PRPF40A-206ENST00000471167 OTOP3Q7RTS5 596 aa7.81□□□□□ -1.16
PRPF40A-206ENST00000471167 SCUBE1Q8IWY4 988 aa7.81□□□□□ -1.16
PRPF40A-206ENST00000471167 CARFQ8N187 725 aa7.81□□□□□ -1.16
PRPF40A-206ENST00000471167 DEPDC7Q96QD5 511 aa7.81□□□□□ -1.16
PRPF40A-206ENST00000471167 ADAM7Q9H2U9 754 aa7.81□□□□□ -1.16
PRPF40A-206ENST00000471167 SLC6A20Q9NP91 592 aa7.81□□□□□ -1.16
PRPF40A-206ENST00000471167 PCDHB4Q9Y5E5 795 aa7.81□□□□□ -1.16
PRPF40A-206ENST00000471167 TRBV23-1A0A0A0MS06 115 aa7.8□□□□□ -1.16
PRPF40A-206ENST00000471167 SLC27A2O14975 620 aa7.8□□□□□ -1.16
PRPF40A-206ENST00000471167 U2SURPO15042 1029 aaKnown RBP7.8□□□□□ -1.16
PRPF40A-206ENST00000471167 NOBOXO60393 691 aa7.8□□□□□ -1.16
PRPF40A-206ENST00000471167 DGKIO75912 1065 aa7.8□□□□□ -1.16
PRPF40A-206ENST00000471167 CTSWP56202 376 aa7.8□□□□□ -1.16
PRPF40A-206ENST00000471167 TEPPQ6URK8 271 aa7.8□□□□□ -1.16
PRPF40A-206ENST00000471167 JMYQ8N9B5 988 aa7.8□□□□□ -1.16
PRPF40A-206ENST00000471167 KYQ8NBH2 561 aa7.8□□□□□ -1.16
PRPF40A-206ENST00000471167 SH3RF2Q8TEC5 729 aa7.8□□□□□ -1.16
PRPF40A-206ENST00000471167 DNAJC7Q99615 494 aa7.8□□□□□ -1.16
PRPF40A-206ENST00000471167 KCNJ15Q99712 375 aa7.8□□□□□ -1.16
PRPF40A-206ENST00000471167 ZFYVE21Q9BQ24 234 aa7.8□□□□□ -1.16
PRPF40A-206ENST00000471167 KRTAP4-9Q9BYQ8 210 aa7.8□□□□□ -1.16
PRPF40A-206ENST00000471167 SMOC1Q9H4F8 434 aa7.8□□□□□ -1.16
PRPF40A-206ENST00000471167 IPPKQ9H8X2 491 aa7.8□□□□□ -1.16
PRPF40A-206ENST00000471167 RTEL1Q9NZ71 1219 aa7.8□□□□□ -1.16
PRPF40A-206ENST00000471167 MYOTQ9UBF9 498 aa7.8□□□□□ -1.16
PRPF40A-206ENST00000471167 PPP1R1BQ9UD71 204 aaPredicted RBP7.8□□□□□ -1.16
PRPF40A-206ENST00000471167 DUSP10Q9Y6W6 482 aa7.8□□□□□ -1.16
PRPF40A-206ENST00000471167 KDM2BQ8NHM5 1336 aa7.79□□□□□ -1.16
PRPF40A-206ENST00000471167 PRICKLE3O43900 615 aaPredicted RBP7.79□□□□□ -1.16
PRPF40A-206ENST00000471167 SOD2P04179 222 aa7.79□□□□□ -1.16
PRPF40A-206ENST00000471167 GRK2P25098 689 aa7.79□□□□□ -1.16
PRPF40A-206ENST00000471167 GRK3P35626 688 aa7.79□□□□□ -1.16
PRPF40A-206ENST00000471167 ZNF761Q86XN6 746 aaPredicted RBP7.79□□□□□ -1.16
PRPF40A-206ENST00000471167 IFNL3Q8IZI9 196 aa7.79□□□□□ -1.16
PRPF40A-206ENST00000471167 DTLQ9NZJ0 730 aa7.79□□□□□ -1.16
PRPF40A-206ENST00000471167 KCNC1P48547 511 aa7.78□□□□□ -1.16
PRPF40A-206ENST00000471167 RBM10P98175 930 aaKnown RBP7.78□□□□□ -1.16
PRPF40A-206ENST00000471167 LRP10Q7Z4F1 713 aa7.78□□□□□ -1.16
PRPF40A-206ENST00000471167 SP8Q8IXZ3 490 aa7.78□□□□□ -1.16
PRPF40A-206ENST00000471167 LILRB2Q8N423 598 aa7.78□□□□□ -1.16
PRPF40A-206ENST00000471167 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.78□□□□□ -1.16
PRPF40A-206ENST00000471167 PDGFDQ9GZP0 370 aaPredicted RBP7.78□□□□□ -1.16
PRPF40A-206ENST00000471167 HSPBP1Q9NZL4 362 aa7.78□□□□□ -1.16
PRPF40A-206ENST00000471167 SASH1O94885 1247 aa7.77□□□□□ -1.17
PRPF40A-206ENST00000471167 RPL13P26373 211 aaKnown RBP7.77□□□□□ -1.17
PRPF40A-206ENST00000471167 KIZQ2M2Z5 673 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms