RNA–Protein interactions for RNA: ENST00000470998.1

HDAC8-216, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 329 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-216ENST00000470998 USP40Q9NVE5 1235 aa6.46□□□□□ -1.38
HDAC8-216ENST00000470998 FAM13BQ9NYF5 915 aa6.46□□□□□ -1.38
HDAC8-216ENST00000470998 PCDHA7Q9UN72 937 aa6.46□□□□□ -1.38
HDAC8-216ENST00000470998 PTPN22Q9Y2R2 807 aa6.46□□□□□ -1.38
HDAC8-216ENST00000470998 MROH7-TTC4A0A0A0MT08 1334 aa6.46□□□□□ -1.38
HDAC8-216ENST00000470998 PLIN4Q96Q06 1357 aa6.45□□□□□ -1.38
HDAC8-216ENST00000470998 TSPY2A6NKD2 308 aa6.45□□□□□ -1.38
HDAC8-216ENST00000470998 SMTNL1A8MU46 457 aa6.45□□□□□ -1.38
HDAC8-216ENST00000470998 MINDY4BA8MYZ0 360 aa6.45□□□□□ -1.38
HDAC8-216ENST00000470998 CXCL11O14625 94 aa6.45□□□□□ -1.38
HDAC8-216ENST00000470998 IKBKBO14920 756 aa6.45□□□□□ -1.38
HDAC8-216ENST00000470998 PRKAB2O43741 272 aa6.45□□□□□ -1.38
HDAC8-216ENST00000470998 WFS1O76024 890 aa6.45□□□□□ -1.38
HDAC8-216ENST00000470998 SMARCA1P28370 1054 aa6.45□□□□□ -1.38
HDAC8-216ENST00000470998 KRT2P35908 639 aa6.45□□□□□ -1.38
HDAC8-216ENST00000470998 SYKP43405 635 aa6.45□□□□□ -1.38
HDAC8-216ENST00000470998 USP5P45974 858 aa6.45□□□□□ -1.38
HDAC8-216ENST00000470998 SOX10P56693 466 aa6.45□□□□□ -1.38
HDAC8-216ENST00000470998 MAP3K10Q02779 954 aa6.45□□□□□ -1.38
HDAC8-216ENST00000470998 PTSQ03393 145 aa6.45□□□□□ -1.38
HDAC8-216ENST00000470998 TROAPQ12815 778 aa6.45□□□□□ -1.38
HDAC8-216ENST00000470998 KIF22Q14807 665 aa6.45□□□□□ -1.38
HDAC8-216ENST00000470998 PTPAQ15257 358 aa6.45□□□□□ -1.38
HDAC8-216ENST00000470998 TLR1Q15399 786 aa6.45□□□□□ -1.38
HDAC8-216ENST00000470998 ANO6Q4KMQ2 910 aa6.45□□□□□ -1.38
HDAC8-216ENST00000470998 RRP12Q5JTH9 1297 aaKnown RBP6.45□□□□□ -1.38
HDAC8-216ENST00000470998 GNASQ5JWF2 1037 aa6.45□□□□□ -1.38
HDAC8-216ENST00000470998 AXDND1Q5T1B0 1012 aaPredicted RBP6.45□□□□□ -1.38
HDAC8-216ENST00000470998 C12orf60Q5U649 245 aa6.45□□□□□ -1.38
HDAC8-216ENST00000470998 RESP18Q5W5W9 173 aa6.45□□□□□ -1.38
HDAC8-216ENST00000470998 TMEM214Q6NUQ4 689 aaKnown RBP6.45□□□□□ -1.38
HDAC8-216ENST00000470998 ANKRD23Q86SG2 305 aa6.45□□□□□ -1.38
HDAC8-216ENST00000470998 ADGRA1Q86SQ6 560 aa6.45□□□□□ -1.38
HDAC8-216ENST00000470998 NBPF11Q86T75 865 aa6.45□□□□□ -1.38
HDAC8-216ENST00000470998 NPAS3Q8IXF0 933 aa6.45□□□□□ -1.38
HDAC8-216ENST00000470998 TRIML1Q8N9V2 468 aa6.45□□□□□ -1.38
HDAC8-216ENST00000470998 CCDC148Q8NFR7 591 aa6.45□□□□□ -1.38
HDAC8-216ENST00000470998 CD99L2Q8TCZ2 262 aa6.45□□□□□ -1.38
HDAC8-216ENST00000470998 SDR42E1Q8WUS8 393 aa6.45□□□□□ -1.38
HDAC8-216ENST00000470998 ARMC5Q96C12 935 aa6.45□□□□□ -1.38
HDAC8-216ENST00000470998 UCN2Q96RP3 112 aa6.45□□□□□ -1.38
HDAC8-216ENST00000470998 GTPBP4Q9BZE4 634 aaKnown RBP6.45□□□□□ -1.38
HDAC8-216ENST00000470998 R3HDMLQ9H3Y0 253 aa6.45□□□□□ -1.38
HDAC8-216ENST00000470998 RRAGDQ9NQL2 400 aaPredicted RBP6.45□□□□□ -1.38
HDAC8-216ENST00000470998 KCNH4Q9UQ05 1017 aa6.45□□□□□ -1.38
HDAC8-216ENST00000470998 HPSEQ9Y251 543 aa6.45□□□□□ -1.38
HDAC8-216ENST00000470998 GPR75-ASB3A0A0A6YYF3 556 aa6.44□□□□□ -1.38
HDAC8-216ENST00000470998 TRIM75PA6NK02 468 aa6.44□□□□□ -1.38
HDAC8-216ENST00000470998 BTBD19C9JJ37 291 aa6.44□□□□□ -1.38
HDAC8-216ENST00000470998 USP17L12C9JPN9 530 aa6.44□□□□□ -1.38
HDAC8-216ENST00000470998 USP17L21D6R901 530 aa6.44□□□□□ -1.38
HDAC8-216ENST00000470998 LAD1O00515 517 aa6.44□□□□□ -1.38
HDAC8-216ENST00000470998 OFD1O75665 1012 aa6.44□□□□□ -1.38
HDAC8-216ENST00000470998 TPM2P07951 284 aa6.44□□□□□ -1.38
HDAC8-216ENST00000470998 PFKFB1P16118 471 aa6.44□□□□□ -1.38
HDAC8-216ENST00000470998 RHOQP17081 205 aa6.44□□□□□ -1.38
HDAC8-216ENST00000470998 HOXD10P28358 340 aa6.44□□□□□ -1.38
HDAC8-216ENST00000470998 HOXA7P31268 230 aaPredicted RBP6.44□□□□□ -1.38
HDAC8-216ENST00000470998 BTDP43251 543 aa6.44□□□□□ -1.38
HDAC8-216ENST00000470998 GDF10P55107 478 aa6.44□□□□□ -1.38
HDAC8-216ENST00000470998 GSDMDP57764 484 aa6.44□□□□□ -1.38
HDAC8-216ENST00000470998 GUCY1B3Q02153 619 aa6.44□□□□□ -1.38
HDAC8-216ENST00000470998 NFIAQ12857 509 aa6.44□□□□□ -1.38
HDAC8-216ENST00000470998 FASTKD5Q7L8L6 764 aaKnown RBP6.44□□□□□ -1.38
HDAC8-216ENST00000470998 TEX2Q8IWB9 1127 aa6.44□□□□□ -1.38
HDAC8-216ENST00000470998 CKAP2LQ8IYA6 745 aa6.44□□□□□ -1.38
HDAC8-216ENST00000470998 PIBF1Q8WXW3 757 aa6.44□□□□□ -1.38
HDAC8-216ENST00000470998 IRF7Q92985 503 aa6.44□□□□□ -1.38
HDAC8-216ENST00000470998 PHKBQ93100 1093 aa6.44□□□□□ -1.38
HDAC8-216ENST00000470998 ZKSCAN4Q969J2 545 aaPredicted RBP6.44□□□□□ -1.38
HDAC8-216ENST00000470998 PHF20Q9BVI0 1012 aa6.44□□□□□ -1.38
HDAC8-216ENST00000470998 KAT14Q9H8E8 782 aa6.44□□□□□ -1.38
HDAC8-216ENST00000470998 CBX8Q9HC52 389 aa6.44□□□□□ -1.38
HDAC8-216ENST00000470998 MCM9Q9NXL9 1143 aa6.44□□□□□ -1.38
HDAC8-216ENST00000470998 AATFQ9NY61 560 aaKnown RBP eCLIP6.44□□□□□ -1.38
HDAC8-216ENST00000470998 IMPACTQ9P2X3 320 aa6.44□□□□□ -1.38
HDAC8-216ENST00000470998 TUBE1Q9UJT0 475 aa6.44□□□□□ -1.38
HDAC8-216ENST00000470998 SLC45A1Q9Y2W3 748 aa6.44□□□□□ -1.38
HDAC8-216ENST00000470998 CLIC4Q9Y696 253 aa6.44□□□□□ -1.38
HDAC8-216ENST00000470998 CNTNAP5Q8WYK1 1306 aa6.44□□□□□ -1.38
HDAC8-216ENST00000470998 KIF28PB7ZC32 967 aa6.43□□□□□ -1.38
HDAC8-216ENST00000470998 BACH1O14867 736 aa6.43□□□□□ -1.38
HDAC8-216ENST00000470998 CBFA2T2O43439 604 aa6.43□□□□□ -1.38
HDAC8-216ENST00000470998 CTNND1O60716 968 aaKnown RBP6.43□□□□□ -1.38
HDAC8-216ENST00000470998 ZNF202O95125 648 aa6.43□□□□□ -1.38
HDAC8-216ENST00000470998 IL2RAP01589 272 aa6.43□□□□□ -1.38
HDAC8-216ENST00000470998 POLR3DP05423 398 aaPredicted RBP6.43□□□□□ -1.38
HDAC8-216ENST00000470998 MYL1P05976 194 aa6.43□□□□□ -1.38
HDAC8-216ENST00000470998 SCG2P13521 617 aa6.43□□□□□ -1.38
HDAC8-216ENST00000470998 CAPN2P17655 700 aa6.43□□□□□ -1.38
HDAC8-216ENST00000470998 INPP5BP32019 993 aa6.43□□□□□ -1.38
HDAC8-216ENST00000470998 KCNJ6P48051 423 aa6.43□□□□□ -1.38
HDAC8-216ENST00000470998 NOVP48745 357 aa6.43□□□□□ -1.38
HDAC8-216ENST00000470998 NDUFA8P51970 172 aa6.43□□□□□ -1.38
HDAC8-216ENST00000470998 NLRP12P59046 1061 aa6.43□□□□□ -1.38
HDAC8-216ENST00000470998 CENPCQ03188 943 aa6.43□□□□□ -1.38
HDAC8-216ENST00000470998 CEBPZQ03701 1054 aaKnown RBP6.43□□□□□ -1.38
HDAC8-216ENST00000470998 TCP10Q12799 353 aa6.43□□□□□ -1.38
HDAC8-216ENST00000470998 IQCB1Q15051 598 aa6.43□□□□□ -1.38
HDAC8-216ENST00000470998 CAMK4Q16566 473 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms