RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 IL31Q6EBC2 164 aa7.06□□□□□ -1.28
VARS-222ENST00000470953 TAPT1Q6NXT6 567 aa7.06□□□□□ -1.28
VARS-222ENST00000470953 YME1L1Q96TA2 773 aa7.06□□□□□ -1.28
VARS-222ENST00000470953 NUP88Q99567 741 aaPredicted RBP7.06□□□□□ -1.28
VARS-222ENST00000470953 APOL5Q9BWW9 433 aa7.06□□□□□ -1.28
VARS-222ENST00000470953 AP5M1Q9H0R1 490 aa7.06□□□□□ -1.28
VARS-222ENST00000470953 EPC1Q9H2F5 836 aa7.06□□□□□ -1.28
VARS-222ENST00000470953 PIH1D3Q9NQM4 214 aaKnown RBP7.06□□□□□ -1.28
VARS-222ENST00000470953 NR2E1Q9Y466 385 aa7.06□□□□□ -1.28
VARS-222ENST00000470953 ITPR3Q14573 2671 aa7.06□□□□□ -1.28
VARS-222ENST00000470953 SCN10AQ9Y5Y9 1956 aa7.06□□□□□ -1.28
VARS-222ENST00000470953 TM4SF5O14894 197 aa7.05□□□□□ -1.28
VARS-222ENST00000470953 ZEB2O60315 1214 aa7.05□□□□□ -1.28
VARS-222ENST00000470953 MYL3P08590 195 aa7.05□□□□□ -1.28
VARS-222ENST00000470953 LINC00271P0C7V0 271 aa7.05□□□□□ -1.28
VARS-222ENST00000470953 CYP2D6P10635 497 aa7.05□□□□□ -1.28
VARS-222ENST00000470953 AKR1B1P15121 316 aa7.05□□□□□ -1.28
VARS-222ENST00000470953 CYP7A1P22680 504 aa7.05□□□□□ -1.28
VARS-222ENST00000470953 TBC1D8BQ0IIM8 1120 aa7.05□□□□□ -1.28
VARS-222ENST00000470953 BFSP2Q13515 415 aa7.05□□□□□ -1.28
VARS-222ENST00000470953 IKBKEQ14164 716 aa7.05□□□□□ -1.28
VARS-222ENST00000470953 LRRFIP1Q32MZ4 808 aaKnown RBP7.05□□□□□ -1.28
VARS-222ENST00000470953 GORABQ5T7V8 394 aa7.05□□□□□ -1.28
VARS-222ENST00000470953 PRR23CQ6ZRP0 262 aa7.05□□□□□ -1.28
VARS-222ENST00000470953 FBXO16Q8IX29 292 aaPredicted RBP7.05□□□□□ -1.28
VARS-222ENST00000470953 CPXCR1Q8N123 301 aa7.05□□□□□ -1.28
VARS-222ENST00000470953 TMEM57Q8N5G2 664 aa7.05□□□□□ -1.28
VARS-222ENST00000470953 FAM133AQ8N9E0 248 aa7.05□□□□□ -1.28
VARS-222ENST00000470953 DHX38Q92620 1227 aaKnown RBP7.05□□□□□ -1.28
VARS-222ENST00000470953 C11orf84Q9BUA3 381 aaPredicted RBP7.05□□□□□ -1.28
VARS-222ENST00000470953 TEX13BQ9BXU2 312 aa7.05□□□□□ -1.28
VARS-222ENST00000470953 S1PR5Q9H228 398 aa7.05□□□□□ -1.28
VARS-222ENST00000470953 COPRSQ9NQ92 184 aa7.05□□□□□ -1.28
VARS-222ENST00000470953 DLGAP2Q9P1A6 1054 aa7.05□□□□□ -1.28
VARS-222ENST00000470953 GMEB2Q9UKD1 530 aa7.05□□□□□ -1.28
VARS-222ENST00000470953 FBXL21Q9UKT6 434 aa7.05□□□□□ -1.28
VARS-222ENST00000470953 SPTAN1Q13813 2472 aaKnown RBP7.05□□□□□ -1.28
VARS-222ENST00000470953 KRBA1A5PL33 1030 aa7.04□□□□□ -1.28
VARS-222ENST00000470953 EFCAB14O75071 495 aa7.04□□□□□ -1.28
VARS-222ENST00000470953 KCNK5O95279 499 aa7.04□□□□□ -1.28
VARS-222ENST00000470953 AMHP03971 560 aa7.04□□□□□ -1.28
VARS-222ENST00000470953 RB1P06400 928 aa7.04□□□□□ -1.28
VARS-222ENST00000470953 COPB2P35606 906 aa7.04□□□□□ -1.28
VARS-222ENST00000470953 ICA1Q05084 483 aa7.04□□□□□ -1.28
VARS-222ENST00000470953 G3BP1Q13283 466 aaKnown RBP eCLIP7.04□□□□□ -1.28
VARS-222ENST00000470953 MBTPS1Q14703 1052 aa7.04□□□□□ -1.28
VARS-222ENST00000470953 LPAL2Q16609 132 aa7.04□□□□□ -1.28
VARS-222ENST00000470953 TMEM179Q6ZVK1 233 aa7.04□□□□□ -1.28
VARS-222ENST00000470953 LRRC8DQ7L1W4 858 aa7.04□□□□□ -1.28
VARS-222ENST00000470953 ZNF605Q86T29 641 aa7.04□□□□□ -1.28
VARS-222ENST00000470953 TTC6Q86TZ1 520 aa7.04□□□□□ -1.28
VARS-222ENST00000470953 ANKRD35Q8N283 1001 aa7.04□□□□□ -1.28
VARS-222ENST00000470953 DYNLL2Q96FJ2 89 aa7.04□□□□□ -1.28
VARS-222ENST00000470953 YTHDC1Q96MU7 727 aaKnown RBP7.04□□□□□ -1.28
VARS-222ENST00000470953 PURBQ96QR8 312 aaKnown RBP7.04□□□□□ -1.28
VARS-222ENST00000470953 C1orf115Q9H7X2 142 aa7.04□□□□□ -1.28
VARS-222ENST00000470953 RAVER2Q9HCJ3 691 aaKnown RBP7.04□□□□□ -1.28
VARS-222ENST00000470953 RXFP3Q9NSD7 469 aa7.04□□□□□ -1.28
VARS-222ENST00000470953 LIMD1Q9UGP4 676 aa7.04□□□□□ -1.28
VARS-222ENST00000470953 TNNQ9UQP3 1299 aa7.04□□□□□ -1.28
VARS-222ENST00000470953 AKAP2Q9Y2D5 859 aa7.04□□□□□ -1.28
VARS-222ENST00000470953 UBR5O95071 2799 aaPredicted RBP7.03□□□□□ -1.28
VARS-222ENST00000470953 NBPF19A0A087WUL8 3843 aa7.03□□□□□ -1.28
VARS-222ENST00000470953 J3QKU1 62 aa7.03□□□□□ -1.28
VARS-222ENST00000470953 PER2O15055 1255 aa7.03□□□□□ -1.28
VARS-222ENST00000470953 UPP2O95045 317 aa7.03□□□□□ -1.28
VARS-222ENST00000470953 EEF2P13639 858 aaKnown RBP7.03□□□□□ -1.28
VARS-222ENST00000470953 GLULP15104 373 aa7.03□□□□□ -1.28
VARS-222ENST00000470953 SELPP16109 830 aa7.03□□□□□ -1.28
VARS-222ENST00000470953 BMPR1AP36894 532 aa7.03□□□□□ -1.28
VARS-222ENST00000470953 ZAP70P43403 619 aa7.03□□□□□ -1.28
VARS-222ENST00000470953 TRAF7Q6Q0C0 670 aa7.03□□□□□ -1.28
VARS-222ENST00000470953 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.03□□□□□ -1.28
VARS-222ENST00000470953 AFAP1L1Q8TED9 768 aa7.03□□□□□ -1.28
VARS-222ENST00000470953 ATP8B4Q8TF62 1192 aa7.03□□□□□ -1.28
VARS-222ENST00000470953 PPP2R3CQ969Q6 453 aa7.03□□□□□ -1.28
VARS-222ENST00000470953 MTG1Q9BT17 334 aaPredicted RBP7.03□□□□□ -1.28
VARS-222ENST00000470953 CHMP4BQ9H444 224 aaKnown RBP7.03□□□□□ -1.28
VARS-222ENST00000470953 POMKQ9H5K3 350 aa7.03□□□□□ -1.28
VARS-222ENST00000470953 ARHGEF10LQ9HCE6 1279 aa7.03□□□□□ -1.28
VARS-222ENST00000470953 HOMER2Q9NSB8 354 aa7.03□□□□□ -1.28
VARS-222ENST00000470953 SEMA4GQ9NTN9 838 aa7.03□□□□□ -1.28
VARS-222ENST00000470953 RNF216Q9NWF9 866 aaPredicted RBP7.03□□□□□ -1.28
VARS-222ENST00000470953 RCAN3Q9UKA8 241 aa7.03□□□□□ -1.28
VARS-222ENST00000470953 Q9Y3F1 56 aa7.03□□□□□ -1.28
VARS-222ENST00000470953 PCDHGA2Q9Y5H1 932 aa7.03□□□□□ -1.28
VARS-222ENST00000470953 RAD21O60216 631 aa7.02□□□□□ -1.29
VARS-222ENST00000470953 TBC1D4O60343 1298 aa7.02□□□□□ -1.29
VARS-222ENST00000470953 LILRB5O75023 590 aa7.02□□□□□ -1.29
VARS-222ENST00000470953 NTRK1P04629 796 aa7.02□□□□□ -1.29
VARS-222ENST00000470953 POLR3DP05423 398 aaPredicted RBP7.02□□□□□ -1.29
VARS-222ENST00000470953 CHMP4BP1P59074 171 aa7.02□□□□□ -1.29
VARS-222ENST00000470953 PTGISQ16647 500 aa7.02□□□□□ -1.29
VARS-222ENST00000470953 ZNF528Q3MIS6 628 aa7.02□□□□□ -1.29
VARS-222ENST00000470953 IQSEC1Q6DN90 963 aa7.02□□□□□ -1.29
VARS-222ENST00000470953 GDF6Q6KF10 455 aaPredicted RBP7.02□□□□□ -1.29
VARS-222ENST00000470953 PSAPL1Q6NUJ1 521 aa7.02□□□□□ -1.29
VARS-222ENST00000470953 NFRKBQ6P4R8 1299 aa7.02□□□□□ -1.29
VARS-222ENST00000470953 SYCE2Q6PIF2 218 aa7.02□□□□□ -1.29
VARS-222ENST00000470953 KIAA1211Q6ZU35 1233 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms