RNA–Protein interactions for RNA: ENST00000470723.5

SND1-209, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-209ENST00000470723 LRRC37A2A6NM11 1700 aa14.36□□□□□ -0.11
SND1-209ENST00000470723 FAM205CA6NFA0 338 aa14.36□□□□□ -0.11
SND1-209ENST00000470723 FIBPO43427 364 aa14.36□□□□□ -0.11
SND1-209ENST00000470723 GJB1P08034 283 aa14.36□□□□□ -0.11
SND1-209ENST00000470723 CCL5P13501 91 aa14.36□□□□□ -0.11
SND1-209ENST00000470723 SMPD1P17405 629 aa14.36□□□□□ -0.11
SND1-209ENST00000470723 ADCYAP1R1P41586 468 aa14.36□□□□□ -0.11
SND1-209ENST00000470723 SP2Q02086 613 aa14.36□□□□□ -0.11
SND1-209ENST00000470723 TNFAIP2Q03169 654 aa14.36□□□□□ -0.11
SND1-209ENST00000470723 ORC2Q13416 577 aaPredicted RBP14.36□□□□□ -0.11
SND1-209ENST00000470723 SEPT14Q6ZU15 432 aa14.36□□□□□ -0.11
SND1-209ENST00000470723 EEPD1Q7L9B9 569 aa14.36□□□□□ -0.11
SND1-209ENST00000470723 BRAPQ7Z569 592 aa14.36□□□□□ -0.11
SND1-209ENST00000470723 SPRYD3Q8NCJ5 442 aa14.36□□□□□ -0.11
SND1-209ENST00000470723 EMID1Q96A84 441 aaPredicted RBP14.36□□□□□ -0.11
SND1-209ENST00000470723 CRISPLD2Q9H0B8 497 aa14.36□□□□□ -0.11
SND1-209ENST00000470723 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.36□□□□□ -0.112e-6■■■□□ 15.7
SND1-209ENST00000470723 ZSCAN16Q9H4T2 348 aaPredicted RBP14.36□□□□□ -0.11
SND1-209ENST00000470723 KCNH7Q9NS40 1196 aa14.36□□□□□ -0.11
SND1-209ENST00000470723 DDX20Q9UHI6 824 aaKnown RBP14.36□□□□□ -0.11
SND1-209ENST00000470723 POTEFA5A3E0 1075 aa14.35□□□□□ -0.11
SND1-209ENST00000470723 ADCY6O43306 1168 aa14.35□□□□□ -0.11
SND1-209ENST00000470723 ATP9AO75110 1047 aa14.35□□□□□ -0.11
SND1-209ENST00000470723 ARIH2O95376 493 aa14.35□□□□□ -0.11
SND1-209ENST00000470723 ARP10275 920 aa14.35□□□□□ -0.11
SND1-209ENST00000470723 TXNP10599 105 aaKnown RBP14.35□□□□□ -0.11
SND1-209ENST00000470723 ZNF76P36508 570 aa14.35□□□□□ -0.11
SND1-209ENST00000470723 RESTQ13127 1097 aa14.35□□□□□ -0.11
SND1-209ENST00000470723 RILPL1Q5EBL4 403 aa14.35□□□□□ -0.11
SND1-209ENST00000470723 TMEM63BQ5T3F8 832 aa14.35□□□□□ -0.11
SND1-209ENST00000470723 GIMAP8Q8ND71 665 aaPredicted RBP14.35□□□□□ -0.11
SND1-209ENST00000470723 ZFP91Q96JP5 570 aaPredicted RBP14.35□□□□□ -0.11
SND1-209ENST00000470723 RNF208Q9H0X6 261 aa14.35□□□□□ -0.11
SND1-209ENST00000470723 UPF3AQ9H1J1 476 aaKnown RBP14.35□□□□□ -0.11
SND1-209ENST00000470723 ZHX1Q9UKY1 873 aaPredicted RBP14.35□□□□□ -0.11
SND1-209ENST00000470723 BRCA2P51587 3418 aa14.35□□□□□ -0.11
SND1-209ENST00000470723 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.34□□□□□ -0.11
SND1-209ENST00000470723 TBX3O15119 743 aa14.34□□□□□ -0.11
SND1-209ENST00000470723 CTAGE5O15320 804 aa14.34□□□□□ -0.11
SND1-209ENST00000470723 DHX15O43143 795 aaKnown RBP14.34□□□□□ -0.11
SND1-209ENST00000470723 SGPL1O95470 568 aa14.34□□□□□ -0.11
SND1-209ENST00000470723 BRD1O95696 1058 aa14.34□□□□□ -0.11
SND1-209ENST00000470723 ZSCAN22P10073 491 aaPredicted RBP14.34□□□□□ -0.11
SND1-209ENST00000470723 KCNA2P16389 499 aa14.34□□□□□ -0.11
SND1-209ENST00000470723 GJA9P57773 515 aa14.34□□□□□ -0.11
SND1-209ENST00000470723 SETQ01105 290 aaPredicted RBP14.34□□□□□ -0.11
SND1-209ENST00000470723 MTMR1Q13613 665 aa14.34□□□□□ -0.11
SND1-209ENST00000470723 LAMC2Q13753 1193 aa14.34□□□□□ -0.11
SND1-209ENST00000470723 NEDD9Q14511 834 aa14.34□□□□□ -0.11
SND1-209ENST00000470723 LETM2Q2VYF4 491 aa14.34□□□□□ -0.11
SND1-209ENST00000470723 CELF3Q5SZQ8 465 aaKnown RBP14.34□□□□□ -0.11
SND1-209ENST00000470723 MYSM1Q5VVJ2 828 aa14.34□□□□□ -0.11
SND1-209ENST00000470723 MCTP1Q6DN14 999 aa14.34□□□□□ -0.11
SND1-209ENST00000470723 PLA2G4DQ86XP0 818 aa14.34□□□□□ -0.11
SND1-209ENST00000470723 C4orf32Q8N8J7 132 aa14.34□□□□□ -0.11
SND1-209ENST00000470723 KLHDC9Q8NEP7 349 aa14.34□□□□□ -0.11
SND1-209ENST00000470723 AGO4Q9HCK5 861 aaKnown RBP14.34□□□□□ -0.11
SND1-209ENST00000470723 KCNMB3Q9NPA1 279 aa14.34□□□□□ -0.11
SND1-209ENST00000470723 OGDHLQ9ULD0 1010 aa14.34□□□□□ -0.11
SND1-209ENST00000470723 ZDHHC9Q9Y397 364 aa14.34□□□□□ -0.11
SND1-209ENST00000470723 MRVI1Q9Y6F6 885 aa14.34□□□□□ -0.11
SND1-209ENST00000470723 NFASCO94856 1347 aa14.34□□□□□ -0.11
SND1-209ENST00000470723 VPS37CA5D8V6 355 aaPredicted RBP14.33□□□□□ -0.12
SND1-209ENST00000470723 A6NJR5 290 aa14.33□□□□□ -0.12
SND1-209ENST00000470723 TDP2O95551 362 aa14.33□□□□□ -0.12
SND1-209ENST00000470723 RARBP10826 455 aa14.33□□□□□ -0.12
SND1-209ENST00000470723 CNGA1P29973 690 aa14.33□□□□□ -0.12
SND1-209ENST00000470723 GJA8P48165 433 aa14.33□□□□□ -0.12
SND1-209ENST00000470723 GNL2Q13823 731 aaKnown RBP14.33□□□□□ -0.12
SND1-209ENST00000470723 LY6KQ17RY6 165 aa14.33□□□□□ -0.12
SND1-209ENST00000470723 PRR16Q569H4 304 aa14.33□□□□□ -0.12
SND1-209ENST00000470723 ETNPPLQ8TBG4 499 aa14.33□□□□□ -0.12
SND1-209ENST00000470723 SLC5A5Q92911 643 aa14.33□□□□□ -0.12
SND1-209ENST00000470723 FAM20AQ96MK3 541 aa14.33□□□□□ -0.12
SND1-209ENST00000470723 MTMR9Q96QG7 549 aa14.33□□□□□ -0.12
SND1-209ENST00000470723 RIT2Q99578 217 aa14.33□□□□□ -0.12
SND1-209ENST00000470723 TBC1D22BQ9NU19 505 aa14.33□□□□□ -0.12
SND1-209ENST00000470723 DDX25Q9UHL0 483 aaKnown RBP14.33□□□□□ -0.12
SND1-209ENST00000470723 NOL7Q9UMY1 257 aaKnown RBP14.33□□□□□ -0.12
SND1-209ENST00000470723 WNT7AO00755 349 aa14.32□□□□□ -0.12
SND1-209ENST00000470723 MSH4O15457 936 aa14.32□□□□□ -0.12
SND1-209ENST00000470723 CCNT1O60563 726 aaKnown RBP14.32□□□□□ -0.12
SND1-209ENST00000470723 ADAMTS4O75173 837 aa14.32□□□□□ -0.12
SND1-209ENST00000470723 GH1P01241 217 aa14.32□□□□□ -0.12
SND1-209ENST00000470723 HOXD8P13378 290 aaPredicted RBP14.32□□□□□ -0.12
SND1-209ENST00000470723 CST5P28325 142 aaPredicted RBP14.32□□□□□ -0.12
SND1-209ENST00000470723 ARHGAP1Q07960 439 aa14.32□□□□□ -0.12
SND1-209ENST00000470723 PKP1Q13835 747 aa14.32□□□□□ -0.12
SND1-209ENST00000470723 CCSAPQ6IQ19 270 aaPredicted RBP14.32□□□□□ -0.12
SND1-209ENST00000470723 B3GNT9Q6UX72 402 aa14.32□□□□□ -0.12
SND1-209ENST00000470723 HAS1Q92839 578 aa14.32□□□□□ -0.12
SND1-209ENST00000470723 IPO9Q96P70 1041 aaKnown RBP14.32□□□□□ -0.12
SND1-209ENST00000470723 DEFB118Q96PH6 123 aa14.32□□□□□ -0.12
SND1-209ENST00000470723 BCAS3Q9H6U6 928 aa14.32□□□□□ -0.12
SND1-209ENST00000470723 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.32□□□□□ -0.12
SND1-209ENST00000470723 MORC2Q9Y6X9 1032 aaPredicted RBP14.32□□□□□ -0.12
SND1-209ENST00000470723 IPO5O00410 1097 aaKnown RBP14.31□□□□□ -0.12
SND1-209ENST00000470723 DYNC1LI2O43237 492 aaPredicted RBP14.31□□□□□ -0.12
SND1-209ENST00000470723 SLC37A4O43826 429 aa14.31□□□□□ -0.12
SND1-209ENST00000470723 PPFIA4O75335 1185 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms